Miyakogusa Predicted Gene

Lj2g3v0146660.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0146660.1 Non Characterized Hit- tr|D7MFT6|D7MFT6_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,37.78,1e-17,seg,NULL,CUFF.34326.1
         (280 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g034000.1 | armadillo/beta-catenin-like repeat protein | H...   114   9e-26

>Medtr1g034000.1 | armadillo/beta-catenin-like repeat protein | HC |
           chr1:12286430-12296265 | 20130731
          Length = 459

 Score =  114 bits (285), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 56/106 (52%), Positives = 72/106 (67%)

Query: 173 GIHDVYVIVPALSTPDNNKVVTLEVYVYARKSSEIGIVEAIVDLLHPGLSSPDLVFTCIT 232
           GI  +Y  +  L TPD+N+V+  +VY YARK ++IGI +A+VD LH GLSSPDLV  CIT
Sbjct: 216 GIQSLYDAIRVLLTPDDNRVLASQVYGYARKFAKIGITDALVDSLHTGLSSPDLVSACIT 275

Query: 233 FKNIAVDDELCNFITVTCGIDAVLRYMNDSGAQGNKVVITDCCTLF 278
            K  AV+DE+C  I    GID VL+ ++DSG QGN  V   CC+L 
Sbjct: 276 LKATAVNDEICKSIAEKGGIDVVLKCIDDSGEQGNTDVAKVCCSLL 321