Miyakogusa Predicted Gene

Lj2g3v0146570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0146570.1 tr|A9U113|A9U113_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173097,41.18,0.000000000000002,seg,NULL,CUFF.34268.1
         (187 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g087760.1 | hypothetical protein | HC | chr2:36931914-3693...   246   1e-65
Medtr8g006800.1 | hypothetical protein | HC | chr8:990089-991507...   240   6e-64

>Medtr2g087760.1 | hypothetical protein | HC |
           chr2:36931914-36934556 | 20130731
          Length = 184

 Score =  246 bits (628), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 128/187 (68%), Positives = 137/187 (73%), Gaps = 3/187 (1%)

Query: 1   MSFMKGDLLSRTRKLVKGLAKAEPVWLKAMEQAPPATFPRAGDKIQTITLPEDVYVKKFY 60
           MSFMKGDLLSR+RKLVKGLAKAEPVWLKAMEQAPPATFPR   K+QTIT PEDVYVK FY
Sbjct: 1   MSFMKGDLLSRSRKLVKGLAKAEPVWLKAMEQAPPATFPRPEGKLQTITFPEDVYVKSFY 60

Query: 61  KKYPESKYHDPIKFCAFDPPPSRLFALRVLELKEHGISEEQAMSVADTXXXXXXXXXXXX 120
           KKYPESKYHDPIKF A DP PSRLFALRVLELKEHGISE +AM VAD             
Sbjct: 61  KKYPESKYHDPIKFSAIDPAPSRLFALRVLELKEHGISENEAMEVADMEYIAEKKAKKKA 120

Query: 121 XXXXXXIAHLQGKRXXXXXXXXXIKEIQAEERKYVRDRFFNPKIHEIVKQKKAEAESFRS 180
                 IA LQGK+         +KEIQAEERK+VRDRFFNP I E+VKQKK E+     
Sbjct: 121 YARLKQIARLQGKKLLPNPFPCPVKEIQAEERKFVRDRFFNPSIRELVKQKKEES---LQ 177

Query: 181 GFRGGDW 187
            F G +W
Sbjct: 178 RFGGNNW 184


>Medtr8g006800.1 | hypothetical protein | HC | chr8:990089-991507 |
           20130731
          Length = 220

 Score =  240 bits (613), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 125/187 (66%), Positives = 136/187 (72%), Gaps = 3/187 (1%)

Query: 1   MSFMKGDLLSRTRKLVKGLAKAEPVWLKAMEQAPPATFPRAGDKIQTITLPEDVYVKKFY 60
           MSFMKGDLLSR+RKLVKGLA AEPVWLKAMEQAPPATFPR   K+ TIT PEDVYVK+FY
Sbjct: 37  MSFMKGDLLSRSRKLVKGLAMAEPVWLKAMEQAPPATFPRPEGKLHTITFPEDVYVKRFY 96

Query: 61  KKYPESKYHDPIKFCAFDPPPSRLFALRVLELKEHGISEEQAMSVADTXXXXXXXXXXXX 120
           KKYPESKYH PIKF A DP PSRLFALRVLELKEHGISE++AM VAD             
Sbjct: 97  KKYPESKYHHPIKFSAIDPAPSRLFALRVLELKEHGISEDEAMEVADMEYIAEKKAKKKA 156

Query: 121 XXXXXXIAHLQGKRXXXXXXXXXIKEIQAEERKYVRDRFFNPKIHEIVKQKKAEAESFRS 180
                 IA LQGK+         +KEIQAEERK+VRDRFFNP I E+VKQKK E+     
Sbjct: 157 YARLKQIARLQGKKLPPNPFPCPVKEIQAEERKFVRDRFFNPSIRELVKQKKEES---MQ 213

Query: 181 GFRGGDW 187
            F G +W
Sbjct: 214 RFGGDNW 220