Miyakogusa Predicted Gene

Lj2g3v0136410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0136410.1 Non Characterized Hit- tr|D8QY50|D8QY50_SELML
Putative uncharacterized protein OS=Selaginella
moelle,49.49,3e-16,seg,NULL; PRICHEXTENSN,NULL; Pollen_Ole_e_I,Pollen
Ole e 1 allergen/extensin,CUFF.36349.1
         (510 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g116947.1 | pollen protein Ole E I-like protein | LC | chr...   121   1e-27
Medtr1g033130.1 | pollen protein Ole E I-like protein | LC | chr...   117   4e-26
Medtr1g033080.1 | pollen Ole e I family allergens | HC | chr1:11...   115   7e-26
Medtr1g033100.1 | pollen protein Ole E I-like protein | LC | chr...    56   7e-08

>Medtr1g116947.1 | pollen protein Ole E I-like protein | LC |
           chr1:52822361-52817506 | 20130731
          Length = 1074

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 54/65 (83%), Positives = 61/65 (93%)

Query: 446 LIVKVVGKVYSYRCYDWEYPEKSHAKKHLKGATVEVKCKAGKNIIKAYGKTKSNGKYSII 505
           LIVKVVGKVYSY+CY+WEYPEKSH KKHLKGA VEVKCKAG+NIIKAYGKTKSNGKY+I 
Sbjct: 423 LIVKVVGKVYSYKCYNWEYPEKSHDKKHLKGAVVEVKCKAGRNIIKAYGKTKSNGKYAIT 482

Query: 506 VKDFD 510
           + +F+
Sbjct: 483 IPNFN 487



 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 30/37 (81%)

Query: 1  MTGRARNPIRGRLCPQMAMALAIVFVSTTIVSVAADG 37
          MT R  +PIRGR  P MAMALAIV +STT+VSVAADG
Sbjct: 1  MTARGSDPIRGRFRPHMAMALAIVLISTTVVSVAADG 37


>Medtr1g033130.1 | pollen protein Ole E I-like protein | LC |
           chr1:11901677-11906311 | 20130731
          Length = 1163

 Score =  117 bits (292), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 52/66 (78%), Positives = 58/66 (87%)

Query: 445 TLIVKVVGKVYSYRCYDWEYPEKSHAKKHLKGATVEVKCKAGKNIIKAYGKTKSNGKYSI 504
           +LIV+VVGKVYS+RCYDW YP KSH KKHLKGA VEV CKAG  I+KAYGKTK+NGKY+I
Sbjct: 431 SLIVRVVGKVYSFRCYDWNYPAKSHNKKHLKGAVVEVTCKAGSKIVKAYGKTKNNGKYAI 490

Query: 505 IVKDFD 510
            VKDFD
Sbjct: 491 TVKDFD 496


>Medtr1g033080.1 | pollen Ole e I family allergens | HC |
           chr1:11878922-11883894 | 20130731
          Length = 1097

 Score =  115 bits (289), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 52/66 (78%), Positives = 58/66 (87%)

Query: 445 TLIVKVVGKVYSYRCYDWEYPEKSHAKKHLKGATVEVKCKAGKNIIKAYGKTKSNGKYSI 504
           +LIV+VVGKVYS+RCYDW YP KSH KKHLKGA VEV CKAG  I+KAYGKTK+NGKY+I
Sbjct: 464 SLIVRVVGKVYSFRCYDWNYPAKSHNKKHLKGAVVEVTCKAGSKIVKAYGKTKNNGKYAI 523

Query: 505 IVKDFD 510
            VKDFD
Sbjct: 524 TVKDFD 529


>Medtr1g033100.1 | pollen protein Ole E I-like protein | LC |
           chr1:11890072-11892621 | 20130731
          Length = 546

 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/35 (77%), Positives = 28/35 (80%)

Query: 476 GATVEVKCKAGKNIIKAYGKTKSNGKYSIIVKDFD 510
            A VEV CKAG  IIKAYGKTK NGKY+I VKDFD
Sbjct: 4   SAVVEVTCKAGSKIIKAYGKTKINGKYAITVKDFD 38