Miyakogusa Predicted Gene

Lj2g3v0126180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0126180.1 Non Characterized Hit- tr|I1MIK6|I1MIK6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20953
PE,55.56,4e-17,seg,NULL,NODE_51528_length_470_cov_219.578720.path1.1
         (99 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g041420.1 | negative cofactor 2 transcriptional co-repress...    90   5e-19
Medtr3g012030.2 | negative cofactor 2 transcriptional co-repress...    86   8e-18
Medtr3g012030.1 | negative cofactor 2 transcriptional co-repress...    86   9e-18
Medtr3g012030.3 | negative cofactor 2 transcriptional co-repress...    85   1e-17
Medtr5g047770.1 | hypothetical protein | LC | chr5:20922686-2092...    49   9e-07
Medtr5g088760.2 | negative cofactor 2 transcriptional co-repress...    47   3e-06
Medtr5g088760.3 | negative cofactor 2 transcriptional co-repress...    47   3e-06
Medtr5g088760.1 | negative cofactor 2 transcriptional co-repress...    47   3e-06

>Medtr8g041420.1 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr8:15595067-15590978 | 20130731
          Length = 305

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/107 (50%), Positives = 68/107 (63%), Gaps = 19/107 (17%)

Query: 1   MTIHDSSETKELPKENAAV-PAESAE-FHNLDLNANTNENEDKKASTTAKQEISEP---- 54
           + I D +E+ ELPK N  V PA++++   N+DLNAN NEN+DKKAST A   ++ P    
Sbjct: 188 VAILDGTESNELPKNNVVVLPADNSDSLLNIDLNANMNENDDKKASTVANLTVTIPEAAN 247

Query: 55  -------------PTESQHEEIPGWSLSDVDKMAIDSVQLANLGTHI 88
                        P  S HEEIPGWSLS+VDKMAIDS+QLA LGT +
Sbjct: 248 PEAANPPVSEPPPPDSSHHEEIPGWSLSEVDKMAIDSMQLAQLGTRM 294


>Medtr3g012030.2 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr3:3186291-3181373 | 20130731
          Length = 292

 Score = 85.9 bits (211), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 7/95 (7%)

Query: 1   MTIHDSSETKELPKENAAVPAESAE-FHNLDLNANTNENEDKKASTT---AKQEISEPP- 55
           M I + SE KEL KEN A   ES +   N+DLNAN +ENE+K  ++T    +  + EP  
Sbjct: 186 MAIDNGSEPKELSKENIAAHEESTQSLRNIDLNANLHENEEKNNTSTDIPTQAPLPEPAA 245

Query: 56  -TESQHEEIPGWSLSDVDKMAIDSVQL-ANLGTHI 88
            T+ QHEEIPGWSLSDVDKMAID++QL ANLG  +
Sbjct: 246 TTDMQHEEIPGWSLSDVDKMAIDTLQLAANLGNRL 280


>Medtr3g012030.1 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr3:3186259-3181373 | 20130731
          Length = 275

 Score = 85.5 bits (210), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 7/95 (7%)

Query: 1   MTIHDSSETKELPKENAAVPAESAE-FHNLDLNANTNENEDKKASTT---AKQEISEPP- 55
           M I + SE KEL KEN A   ES +   N+DLNAN +ENE+K  ++T    +  + EP  
Sbjct: 169 MAIDNGSEPKELSKENIAAHEESTQSLRNIDLNANLHENEEKNNTSTDIPTQAPLPEPAA 228

Query: 56  -TESQHEEIPGWSLSDVDKMAIDSVQL-ANLGTHI 88
            T+ QHEEIPGWSLSDVDKMAID++QL ANLG  +
Sbjct: 229 TTDMQHEEIPGWSLSDVDKMAIDTLQLAANLGNRL 263


>Medtr3g012030.3 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr3:3186259-3181373 | 20130731
          Length = 231

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 7/95 (7%)

Query: 1   MTIHDSSETKELPKENAAVPAESAE-FHNLDLNANTNENEDKKASTT---AKQEISEPP- 55
           M I + SE KEL KEN A   ES +   N+DLNAN +ENE+K  ++T    +  + EP  
Sbjct: 125 MAIDNGSEPKELSKENIAAHEESTQSLRNIDLNANLHENEEKNNTSTDIPTQAPLPEPAA 184

Query: 56  -TESQHEEIPGWSLSDVDKMAIDSVQL-ANLGTHI 88
            T+ QHEEIPGWSLSDVDKMAID++QL ANLG  +
Sbjct: 185 TTDMQHEEIPGWSLSDVDKMAIDTLQLAANLGNRL 219


>Medtr5g047770.1 | hypothetical protein | LC |
           chr5:20922686-20923493 | 20130731
          Length = 147

 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 6/74 (8%)

Query: 1   MTIHDSSETKELPKENAAVPAESAE-FHNLDLNANTNENEDKKASTT---AKQEISEPP- 55
           M+I + SE KEL KEN A   ES +   N+DLNAN   NE+K  ++        + EP  
Sbjct: 69  MSIDNGSEPKELSKENIAAHEESTQSLRNIDLNANLRVNEEKNNTSMDIPTHAPLPEPAA 128

Query: 56  -TESQHEEIPGWSL 68
            T+ QHEEIPG+S 
Sbjct: 129 TTDMQHEEIPGYSF 142


>Medtr5g088760.2 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr5:38540164-38543606 | 20130731
          Length = 302

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 13/77 (16%)

Query: 20  PAESAEFHNLDLNANTNENEDKKASTT------------AKQEISEPPTESQHEEIPGWS 67
           PAE     N DLN N + ++D    +T              +E  +  +E + EE PGWS
Sbjct: 212 PAEVV-VRNFDLNLNPDPDDDMDVISTPTPIPTGSSSKSVSEEKMKSISEEKIEEYPGWS 270

Query: 68  LSDVDKMAIDSVQLANL 84
           LSD++KMAID +QLANL
Sbjct: 271 LSDMEKMAIDPLQLANL 287


>Medtr5g088760.3 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr5:38540164-38543606 | 20130731
          Length = 293

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 13/77 (16%)

Query: 20  PAESAEFHNLDLNANTNENEDKKASTT------------AKQEISEPPTESQHEEIPGWS 67
           PAE     N DLN N + ++D    +T              +E  +  +E + EE PGWS
Sbjct: 203 PAEVV-VRNFDLNLNPDPDDDMDVISTPTPIPTGSSSKSVSEEKMKSISEEKIEEYPGWS 261

Query: 68  LSDVDKMAIDSVQLANL 84
           LSD++KMAID +QLANL
Sbjct: 262 LSDMEKMAIDPLQLANL 278


>Medtr5g088760.1 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr5:38540164-38543606 | 20130731
          Length = 285

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 13/77 (16%)

Query: 20  PAESAEFHNLDLNANTNENEDKKASTT------------AKQEISEPPTESQHEEIPGWS 67
           PAE     N DLN N + ++D    +T              +E  +  +E + EE PGWS
Sbjct: 195 PAEVV-VRNFDLNLNPDPDDDMDVISTPTPIPTGSSSKSVSEEKMKSISEEKIEEYPGWS 253

Query: 68  LSDVDKMAIDSVQLANL 84
           LSD++KMAID +QLANL
Sbjct: 254 LSDMEKMAIDPLQLANL 270