Miyakogusa Predicted Gene
- Lj2g3v0125090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0125090.1 Non Characterized Hit- tr|I3T716|I3T716_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.42,0,NUDIX,NUDIX hydrolase domain; NUDIXFAMILY,NUDIX
hydrolase; no description,NUDIX hydrolase domain; NU,CUFF.34229.1
(173 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g031150.1 | nudix hydrolase-like protein | HC | chr1:10881... 325 2e-89
Medtr1g031150.2 | nudix hydrolase-like protein | HC | chr1:10881... 262 9e-71
Medtr1g090550.1 | nudix hydrolase-like protein | HC | chr1:40552... 217 4e-57
Medtr3g082770.1 | nudix family hydrolase | HC | chr3:37356453-37... 53 1e-07
Medtr4g133945.2 | nudix hydrolase superfamily protein | HC | chr... 47 6e-06
Medtr4g133945.3 | nudix hydrolase superfamily protein | HC | chr... 47 6e-06
Medtr4g133945.1 | nudix hydrolase superfamily protein | HC | chr... 47 6e-06
>Medtr1g031150.1 | nudix hydrolase-like protein | HC |
chr1:10881162-10878163 | 20130731
Length = 173
Score = 325 bits (832), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 154/173 (89%), Positives = 161/173 (93%)
Query: 1 MEGLPQGYRPNVGVCLINSNDQIFVASRLNVPGAWQMPQGGIEDGEDPKSAAIRELREET 60
ME LPQGYRPNVGVCLINS+DQIFVASRLNVPGAWQMPQGGIEDGE+PKSAAIRELREET
Sbjct: 1 MENLPQGYRPNVGVCLINSDDQIFVASRLNVPGAWQMPQGGIEDGEEPKSAAIRELREET 60
Query: 61 GIVSAEIIAEVQNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMRFTKDDNEVNLANGE 120
GIVSAEIIAEV WLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLM+ KDD E+NLA GE
Sbjct: 61 GIVSAEIIAEVDKWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMKLKKDDGEINLATGE 120
Query: 121 AETEFAEWKWTDPEEVIEQAVDYKRPTYEEVIRTFKPYLQGNSISAKCKSTKW 173
A+ EFAEWKW PEEVIEQAVDYKRPTYEEV+ TFKPY QGN+ISAKCKSTKW
Sbjct: 121 ADPEFAEWKWASPEEVIEQAVDYKRPTYEEVVTTFKPYFQGNAISAKCKSTKW 173
>Medtr1g031150.2 | nudix hydrolase-like protein | HC |
chr1:10881162-10878163 | 20130731
Length = 155
Score = 262 bits (670), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 128/152 (84%), Positives = 136/152 (89%), Gaps = 1/152 (0%)
Query: 1 MEGLPQGYRPNVGVCLINSNDQIFVASRLNVPGAWQMPQGGIEDGEDPKSAAIRELREET 60
ME LPQGYRPNVGVCLINS+DQIFVASRLNVPGAWQMPQGGIEDGE+PKSAAIRELREET
Sbjct: 1 MENLPQGYRPNVGVCLINSDDQIFVASRLNVPGAWQMPQGGIEDGEEPKSAAIRELREET 60
Query: 61 GIVSAEIIAEVQNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMRFTKDDNEVNLANGE 120
GIVSAEIIAEV WLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLM+ KDD E+NLA GE
Sbjct: 61 GIVSAEIIAEVDKWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMKLKKDDGEINLATGE 120
Query: 121 AETEFAEWKWTDPEEVIEQAVDYKRPTYEEVI 152
A+ EFAEWKW PEEVIEQ V YK T+ + +
Sbjct: 121 ADPEFAEWKWASPEEVIEQ-VSYKNMTWNKYL 151
>Medtr1g090550.1 | nudix hydrolase-like protein | HC |
chr1:40552556-40550013 | 20130731
Length = 202
Score = 217 bits (553), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 127/161 (78%), Gaps = 1/161 (0%)
Query: 1 MEGLPQGYRPNVGVCLINSNDQIFVASRLNVPGAWQMPQGGIEDGEDPKSAAIRELREET 60
ME P+GYR NVG+CLIN+ ++F ASRL++P +WQMPQGGI++GEDP++AAIRELREET
Sbjct: 42 MEAPPEGYRKNVGICLINNQKKVFSASRLDIPNSWQMPQGGIDEGEDPRNAAIRELREET 101
Query: 61 GIVSAEIIAEVQNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMRFTKDDNEVN-LANG 119
G+ SAEIIAE WLTYDFPP V+ ++N WG +W GQAQKWFL +FT D E+N L +G
Sbjct: 102 GVTSAEIIAEAPFWLTYDFPPKVRERLNLQWGTDWKGQAQKWFLFKFTGQDQEINLLGDG 161
Query: 120 EAETEFAEWKWTDPEEVIEQAVDYKRPTYEEVIRTFKPYLQ 160
+ EF +W W PE+V++ AVD+K+P Y+EV+ +F P+LQ
Sbjct: 162 TEKPEFGQWSWISPEQVLKLAVDFKKPVYKEVLASFAPHLQ 202
>Medtr3g082770.1 | nudix family hydrolase | HC |
chr3:37356453-37359350 | 20130731
Length = 346
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Query: 7 GYRPNVGVCLINSNDQIFVAS----RLNVPGAWQMPQGGIEDGEDPKSAAIRELREETGI 62
+R ++G ++N+N ++ V R + G W++P G + +GED +AAIRE++EETGI
Sbjct: 171 SHRISIGAFVVNANMEVLVVQEKNGRFSGKGIWKLPTGAVNEGEDVCAAAIREVKEETGI 230
>Medtr4g133945.2 | nudix hydrolase superfamily protein | HC |
chr4:56076403-56072378 | 20130731
Length = 278
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 8 YRPNVGVCLINSNDQIFV----ASRLNVPGAWQMPQGGIEDGEDPKSAAIRELREETGIV 63
+R +G ++N ++ V G+W+ P G + GED +AA+RE++EETGI
Sbjct: 106 HRVGIGAFVVNEKREVLVLQEKTGHFQGTGSWKFPTGVADQGEDICAAAVREVKEETGID 165
Query: 64 S--AEIIAEVQNWLTY 77
S E++A Q+ +T+
Sbjct: 166 SEFVEVLAFRQSHMTF 181
>Medtr4g133945.3 | nudix hydrolase superfamily protein | HC |
chr4:56076283-56072378 | 20130731
Length = 278
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 8 YRPNVGVCLINSNDQIFV----ASRLNVPGAWQMPQGGIEDGEDPKSAAIRELREETGIV 63
+R +G ++N ++ V G+W+ P G + GED +AA+RE++EETGI
Sbjct: 106 HRVGIGAFVVNEKREVLVLQEKTGHFQGTGSWKFPTGVADQGEDICAAAVREVKEETGID 165
Query: 64 S--AEIIAEVQNWLTY 77
S E++A Q+ +T+
Sbjct: 166 SEFVEVLAFRQSHMTF 181
>Medtr4g133945.1 | nudix hydrolase superfamily protein | HC |
chr4:56076634-56072378 | 20130731
Length = 278
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 8 YRPNVGVCLINSNDQIFV----ASRLNVPGAWQMPQGGIEDGEDPKSAAIRELREETGIV 63
+R +G ++N ++ V G+W+ P G + GED +AA+RE++EETGI
Sbjct: 106 HRVGIGAFVVNEKREVLVLQEKTGHFQGTGSWKFPTGVADQGEDICAAAVREVKEETGID 165
Query: 64 S--AEIIAEVQNWLTY 77
S E++A Q+ +T+
Sbjct: 166 SEFVEVLAFRQSHMTF 181