Miyakogusa Predicted Gene

Lj2g3v0093580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0093580.1 tr|G7L911|G7L911_MEDTR B3 domain-containing
protein OS=Medicago truncatula GN=MTR_8g103940 PE=4
SV=1,53.95,0.00000000002,B3,B3 DNA binding domain; DNA-binding
pseudobarrel domain,DNA-binding pseudobarrel domain; no
descri,CUFF.34199.1
         (95 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g103940.1 | transcriptional factor B3 family protein | LC ...    74   4e-14
Medtr1g108780.1 | transcriptional factor B3 family protein | HC ...    64   2e-11
Medtr1g035460.1 | plant-specific B3-DNA-binding domain protein |...    62   9e-11
Medtr7g050720.1 | transcriptional factor B3 family protein | LC ...    56   9e-09
Medtr4g068320.1 | B3 domain transcription factor VRN1-like prote...    55   1e-08
Medtr7g050710.1 | plant-specific B3-DNA-binding domain protein |...    54   3e-08
Medtr3g098790.1 | plant-specific B3-DNA-binding domain protein |...    53   6e-08
Medtr1g034240.1 | B3 domain transcription factor VRN1-like prote...    50   4e-07
Medtr4g083390.5 | B3 DNA-binding domain protein | HC | chr4:3245...    47   5e-06
Medtr4g083390.6 | B3 DNA-binding domain protein | HC | chr4:3245...    47   5e-06
Medtr4g083390.4 | B3 DNA-binding domain protein | HC | chr4:3245...    47   5e-06
Medtr4g083390.7 | B3 DNA-binding domain protein | HC | chr4:3245...    47   5e-06
Medtr4g083390.10 | B3 DNA-binding domain protein | HC | chr4:324...    47   5e-06
Medtr4g083390.8 | B3 DNA-binding domain protein | HC | chr4:3245...    47   5e-06
Medtr4g083390.9 | B3 DNA-binding domain protein | HC | chr4:3245...    47   5e-06
Medtr4g083390.3 | B3 DNA-binding domain protein | HC | chr4:3245...    46   7e-06
Medtr4g083390.2 | B3 DNA-binding domain protein | HC | chr4:3245...    46   7e-06
Medtr4g083390.1 | B3 DNA-binding domain protein | HC | chr4:3245...    46   7e-06

>Medtr8g103940.1 | transcriptional factor B3 family protein | LC |
           chr8:43749832-43752569 | 20130731
          Length = 498

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 4/76 (5%)

Query: 1   MILYVID-GRTWHVKYLLRRGTISAGWKKFASDNNLKVGDVCVFELTKNNLFLSKYQSFH 59
           ++L V+D GRTW+VK+  R   +S GWKKFA DNNLKVGDVC+FE+ K+N +  K   F 
Sbjct: 274 IVLQVLDNGRTWNVKHWGRH--VSTGWKKFAFDNNLKVGDVCLFEMIKSNAYAFKVLIFR 331

Query: 60  LGENHINLIPLHHKVG 75
           LGE H +L P  H  G
Sbjct: 332 LGEEH-SLPPQVHGDG 346


>Medtr1g108780.1 | transcriptional factor B3 family protein | HC |
           chr1:49164002-49166141 | 20130731
          Length = 461

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 2/69 (2%)

Query: 7   DGRTWHVKYLLRRGTISAGWKKFASDNNLKVGDVCVFELTKNNLFLSKYQSFHLGENHIN 66
           D RTW VKY LR+  +S GWK F SDNNLK+GDVC+FE+  +  +  K   F + E   +
Sbjct: 240 DERTWIVKYCLRK--MSNGWKTFVSDNNLKLGDVCLFEMINSKSYAFKVLIFRVDEEQHS 297

Query: 67  LIPLHHKVG 75
           L P  H  G
Sbjct: 298 LPPQVHGDG 306


>Medtr1g035460.1 | plant-specific B3-DNA-binding domain protein | LC
           | chr1:12873695-12875594 | 20130731
          Length = 396

 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 1   MILYVIDGRTWHVKYLLRRGTISAGWKKFASDNNLKVGDVCVFELTKNNLFLSKYQSFHL 60
           ++L ++DGR W  KY      I+ GWKKFA  N LK+GDVC+FELTK+     K   F L
Sbjct: 231 ILLQLLDGRVWDAKYC--SAKINGGWKKFAVHNKLKIGDVCIFELTKSQYLTLKVIIFRL 288

Query: 61  GEN 63
            E+
Sbjct: 289 EED 291


>Medtr7g050720.1 | transcriptional factor B3 family protein | LC |
           chr7:17612279-17615149 | 20130731
          Length = 320

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 8/59 (13%)

Query: 3   LYVIDGRTWHVKYLLRRGT--------ISAGWKKFASDNNLKVGDVCVFELTKNNLFLS 53
           L +++G+ W  +YL+R+G          S+ WK FA DNNLKVGDVC FEL   +  L+
Sbjct: 250 LRLLNGKVWPARYLIRKGNRKGEKFEMYSSEWKTFAEDNNLKVGDVCTFELFPTSTILT 308


>Medtr4g068320.1 | B3 domain transcription factor VRN1-like protein
           | HC | chr4:25619387-25622490 | 20130731
          Length = 429

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 3   LYVIDGRTWHVKYLLR--RGTISAGWKKFASDNNLKVGDVCVFELTKNNLFLSKYQSFHL 60
           L + DGR W V+ L R  R  +S GW +F+ +NNL  GDVCVFEL      + +   F +
Sbjct: 330 LQISDGRQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELVATKEVVLQVTVFRI 389

Query: 61  GENHINLIP 69
            E+   L P
Sbjct: 390 TEDEGPLSP 398


>Medtr7g050710.1 | plant-specific B3-DNA-binding domain protein | LC
           | chr7:17605025-17607057 | 20130731
          Length = 324

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 8/56 (14%)

Query: 3   LYVIDGRTWHVKYLLR--------RGTISAGWKKFASDNNLKVGDVCVFELTKNNL 50
           L  ++GR W  +Y  R        R  +++GW++FA DNNLKVGDVC FEL  + +
Sbjct: 243 LQALNGRVWSARYSTRNRTSDNGIRFELTSGWEEFAKDNNLKVGDVCKFELISSTI 298


>Medtr3g098790.1 | plant-specific B3-DNA-binding domain protein | LC
           | chr3:45269198-45271140 | 20130731
          Length = 328

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 6/45 (13%)

Query: 7   DGRTWHVKYLLR------RGTISAGWKKFASDNNLKVGDVCVFEL 45
           +GR W  KY +R      R  +S+GWK FA DNNLKVGD C FEL
Sbjct: 241 NGRVWPAKYRIRMSHTGLRFELSSGWKTFAKDNNLKVGDACNFEL 285


>Medtr1g034240.1 | B3 domain transcription factor VRN1-like protein
           | HC | chr1:12442470-12446398 | 20130731
          Length = 433

 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 3   LYVIDGRTWHVKYLLR--RGTISAGWKKFASDNNLKVGDVCVFELTKNNLFLSKYQSFHL 60
           L + DGR W V+ L +  R  +S GW +F  +NNL  GD+CVFEL +    + +   F +
Sbjct: 334 LQISDGRQWPVRCLYKGGRAKLSQGWYEFTLENNLGEGDICVFELLRTREVVLQVTLFRV 393

Query: 61  GENHINLI 68
            E+   L 
Sbjct: 394 KEDDSGLF 401


>Medtr4g083390.5 | B3 DNA-binding domain protein | HC |
          chr4:32459292-32456722 | 20130731
          Length = 133

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 8  GRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTKNN 49
          G++W + Y  +  T    S  W+KFA DN LK+GD CVFEL KN+
Sbjct: 53 GKSWGMTYNGQNKTKQFDSVSWEKFAEDNYLKLGDACVFELMKNS 97


>Medtr4g083390.6 | B3 DNA-binding domain protein | HC |
          chr4:32459292-32456722 | 20130731
          Length = 133

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 8  GRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTKNN 49
          G++W + Y  +  T    S  W+KFA DN LK+GD CVFEL KN+
Sbjct: 53 GKSWGMTYNGQNKTKQFDSVSWEKFAEDNYLKLGDACVFELMKNS 97


>Medtr4g083390.4 | B3 DNA-binding domain protein | HC |
          chr4:32459292-32456722 | 20130731
          Length = 133

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 8  GRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTKNN 49
          G++W + Y  +  T    S  W+KFA DN LK+GD CVFEL KN+
Sbjct: 53 GKSWGMTYNGQNKTKQFDSVSWEKFAEDNYLKLGDACVFELMKNS 97


>Medtr4g083390.7 | B3 DNA-binding domain protein | HC |
          chr4:32459292-32456722 | 20130731
          Length = 133

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 8  GRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTKNN 49
          G++W + Y  +  T    S  W+KFA DN LK+GD CVFEL KN+
Sbjct: 53 GKSWGMTYNGQNKTKQFDSVSWEKFAEDNYLKLGDACVFELMKNS 97


>Medtr4g083390.10 | B3 DNA-binding domain protein | HC |
          chr4:32459292-32456722 | 20130731
          Length = 133

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 8  GRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTKNN 49
          G++W + Y  +  T    S  W+KFA DN LK+GD CVFEL KN+
Sbjct: 53 GKSWGMTYNGQNKTKQFDSVSWEKFAEDNYLKLGDACVFELMKNS 97


>Medtr4g083390.8 | B3 DNA-binding domain protein | HC |
          chr4:32459292-32456722 | 20130731
          Length = 133

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 8  GRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTKNN 49
          G++W + Y  +  T    S  W+KFA DN LK+GD CVFEL KN+
Sbjct: 53 GKSWGMTYNGQNKTKQFDSVSWEKFAEDNYLKLGDACVFELMKNS 97


>Medtr4g083390.9 | B3 DNA-binding domain protein | HC |
          chr4:32459292-32456722 | 20130731
          Length = 133

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 8  GRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTKNN 49
          G++W + Y  +  T    S  W+KFA DN LK+GD CVFEL KN+
Sbjct: 53 GKSWGMTYNGQNKTKQFDSVSWEKFAEDNYLKLGDACVFELMKNS 97


>Medtr4g083390.3 | B3 DNA-binding domain protein | HC |
          chr4:32459282-32456816 | 20130731
          Length = 149

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 8  GRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTKNN 49
          G++W + Y  +  T    S  W+KFA DN LK+GD CVFEL KN+
Sbjct: 53 GKSWGMTYNGQNKTKQFDSVSWEKFAEDNYLKLGDACVFELMKNS 97


>Medtr4g083390.2 | B3 DNA-binding domain protein | HC |
          chr4:32459282-32456816 | 20130731
          Length = 149

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 8  GRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTKNN 49
          G++W + Y  +  T    S  W+KFA DN LK+GD CVFEL KN+
Sbjct: 53 GKSWGMTYNGQNKTKQFDSVSWEKFAEDNYLKLGDACVFELMKNS 97


>Medtr4g083390.1 | B3 DNA-binding domain protein | HC |
           chr4:32458773-32457094 | 20130731
          Length = 193

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 8   GRTWHVKYLLRRGT---ISAGWKKFASDNNLKVGDVCVFELTKNN 49
           G++W + Y  +  T    S  W+KFA DN LK+GD CVFEL KN+
Sbjct: 113 GKSWGMTYNGQNKTKQFDSVSWEKFAEDNYLKLGDACVFELMKNS 157