Miyakogusa Predicted Gene

Lj2g3v0075030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0075030.1 Non Characterized Hit- tr|I1ND16|I1ND16_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,36.57,0.000000001,MFMR,G-box binding, MFMR,CUFF.34174.1
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g034500.1 | bZIP transcription factor | HC | chr1:12570997...    72   1e-13

>Medtr1g034500.1 | bZIP transcription factor | HC |
           chr1:12570997-12576886 | 20130731
          Length = 307

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 58/115 (50%), Gaps = 30/115 (26%)

Query: 1   MATEESNDIGTPCKSVVPQDE-TQNRPLLPDWT-RMQAYYNPGSTQIPLLN-PHATGSYL 57
           M  EES   G P   + PQD+ T N+P+LP WT  MQAYYNPGST  P  N P A   YL
Sbjct: 1   MRKEESTPFGRPYNFMAPQDDQTPNKPMLPHWTTAMQAYYNPGSTPSPFYNHPLAAAPYL 60

Query: 58  YH-HMTPNQ--------------------------DAALVFSQKVHQNFGKRNLD 85
           YH ++  NQ                          DAA  FS+ VH+NFG++N D
Sbjct: 61  YHQYILQNQANNVLLQRDALHDPVRLSNKPHVVVEDAAKAFSEMVHRNFGQKNQD 115