Miyakogusa Predicted Gene
- Lj2g3v0065000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0065000.1 Non Characterized Hit- tr|D5ACI0|D5ACI0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,56.03,5e-19,seg,NULL,gene.g38352.t1.1
(122 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g033620.1 | myb-like DNA-binding domain, shaqkyf class pro... 160 4e-40
Medtr8g063600.1 | myb-like transcription factor family protein |... 97 5e-21
Medtr8g063870.1 | myb-like transcription factor family protein |... 61 2e-10
Medtr4g111975.1 | MYB-like transcription factor family protein |... 51 3e-07
>Medtr1g033620.1 | myb-like DNA-binding domain, shaqkyf class
protein | HC | chr1:12134107-12135768 | 20130731
Length = 244
Score = 160 bits (404), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 95/126 (75%), Gaps = 6/126 (4%)
Query: 1 MNKDRRRSSIHDITSVNNGDIAAPQGPIXXXXXXXXXXXXXXXXXXAFPTSTGVPGSGMY 60
MNKDRRRSSIHDITSVNNGD++ PQGPI A P++TG+PG+GMY
Sbjct: 57 MNKDRRRSSIHDITSVNNGDVSTPQGPITGQTNGSSGNSAGKSVKQAVPSTTGLPGAGMY 116
Query: 61 ATPTIGQPIGGPLISAVGTPVNLPGAPPHMVY----PVPGALVPGAPMNMVPITYPMP-H 115
A PTIGQPIGGPL+SAVGTPVNL APPHM Y PVPG +V GAP+NMVP+TYPMP H
Sbjct: 117 AAPTIGQPIGGPLVSAVGTPVNL-SAPPHMAYGIRAPVPGTVVSGAPVNMVPMTYPMPHH 175
Query: 116 TSAPHR 121
TSAPHR
Sbjct: 176 TSAPHR 181
>Medtr8g063600.1 | myb-like transcription factor family protein | HC
| chr8:26556670-26553511 | 20130731
Length = 290
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 75/129 (58%), Gaps = 13/129 (10%)
Query: 2 NKDRRRSSIHDITSVNNGDIAAPQGPIXXXXXXXXXXXXXXXXXXAFPT-STGV------ 54
K+RRRSSIHD+T V NGDI+APQGPI A P G+
Sbjct: 161 KKERRRSSIHDVTFVKNGDISAPQGPITGQASNSAANSAGQSAEQAPPVPPAGIKTLDNP 220
Query: 55 --PGSGMYATPTIGQPIGGPLISAVGTPVNLPGAPPHMVY---PVPGALVPGAPMNMVPI 109
P +G++A P IGQPIGGP++SAVGT VNL AP M Y PV ++PG PMN+ P+
Sbjct: 221 PSPPAGIHAAPRIGQPIGGPVVSAVGTTVNLT-APGDMDYGLGPVSETVMPGVPMNLGPM 279
Query: 110 TYPMPHTSA 118
TY M HT A
Sbjct: 280 TYAMLHTYA 288
>Medtr8g063870.1 | myb-like transcription factor family protein | LC
| chr8:26776011-26777328 | 20130731
Length = 273
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 2 NKDRRRSSIHDITSVNNGDIAAPQGPIXXXXXXXXXXXXXX--XXXXAFPTSTGVP---- 55
K+RRRSS HD+T V NGDI+AP G I A + P
Sbjct: 147 KKERRRSSRHDVTYVENGDISAPHGAITGQASDYARQSATQTPQAPSAGTRTLNDPPVPP 206
Query: 56 ----------GSGMYATPTIGQPIGGPLISAVGTPVNLPGAPPHMVYPVPGALVPGAPMN 105
G G+YA IGQPIGG + PG + + PV +PG PMN
Sbjct: 207 AGMYVVTPPSGVGVYAAHRIGQPIGGRNCT--------PGQMAYGIGPVSWTSMPGVPMN 258
Query: 106 MVPITYPMPHTSA 118
+ P+T+PM +T A
Sbjct: 259 LGPMTFPMQNTYA 271
>Medtr4g111975.1 | MYB-like transcription factor family protein | HC
| chr4:46325032-46326931 | 20130731
Length = 303
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 32/102 (31%)
Query: 1 MNKDRRRSSIHDITSVNNGDIAAP-QGPIXXXXXXXXXXXXXXXXXXAFPTST-GV---- 54
MN+DRRRSSIHDITSVNNGD+A+ Q PI P++T G+
Sbjct: 190 MNRDRRRSSIHDITSVNNGDVASNHQAPI------------TGQHGNTLPSNTMGLGQSM 237
Query: 55 ----------PGSGMYATPTIGQPIGGP---LISAVGTPVNL 83
G GMY P +G P P + SAVGTPV L
Sbjct: 238 KHRVQPHHPPGGLGMYGAP-VGHPFVAPPAHMASAVGTPVML 278