Miyakogusa Predicted Gene

Lj2g3v0044990.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0044990.2 tr|E5GC48|E5GC48_CUCME SNF5-like protein BSH
OS=Cucumis melo subsp. melo PE=4
SV=1,74.55,1e-18,SNF5,SNF5/SMARCB1/INI1; Peptidase_C48,Peptidase C48,
SUMO/Sentrin/Ubl1,CUFF.34158.2
         (105 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g124260.1 | chromatin structure-remodeling complex protein...   109   7e-25
Medtr0623s0010.1 | Ulp1 protease family, carboxy-terminal domain...    49   9e-07
Medtr0089s0100.6 | Ulp1 protease family, carboxy-terminal domain...    46   7e-06
Medtr0089s0100.1 | Ulp1 protease family, carboxy-terminal domain...    46   8e-06
Medtr0089s0100.3 | Ulp1 protease family, carboxy-terminal domain...    46   1e-05
Medtr0089s0100.2 | Ulp1 protease family, carboxy-terminal domain...    46   1e-05

>Medtr4g124260.1 | chromatin structure-remodeling complex protein
           BSH | HC | chr4:51314560-51311204 | 20130731
          Length = 240

 Score =  109 bits (272), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 51/55 (92%)

Query: 1   MYAGEKIIPIKLDLCVNHMLVKDQFLWDLNNFESDPEELARIFCKDMGIEDPEVG 55
           MYAGEKI+PIKLDL VNH LVKDQFLWDLNNF+SDPEE AR FC+DMGIEDPEVG
Sbjct: 92  MYAGEKIVPIKLDLRVNHTLVKDQFLWDLNNFDSDPEEFARTFCRDMGIEDPEVG 146


>Medtr0623s0010.1 | Ulp1 protease family, carboxy-terminal domain
           protein | HC | scaffold0623:6539-4754 | 20130731
          Length = 145

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 28/40 (70%)

Query: 46  DMGIEDPEVGCPRQTNSVDCGYYVIKFMKDIITHQQLVIP 85
           DMG+E     CPRQ N +DCGY+V++FMK+I+  +   IP
Sbjct: 72  DMGMETFNKQCPRQENGIDCGYFVMRFMKEILISKLNEIP 111


>Medtr0089s0100.6 | Ulp1 protease family, carboxy-terminal domain
          protein | LC | scaffold0089:33244-37385 | 20130731
          Length = 102

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 26/33 (78%)

Query: 53 EVGCPRQTNSVDCGYYVIKFMKDIITHQQLVIP 85
          ++ CP QTN +DCGY+V++FMK+II   Q +IP
Sbjct: 22 KIKCPMQTNGIDCGYFVMQFMKEIILANQDMIP 54


>Medtr0089s0100.1 | Ulp1 protease family, carboxy-terminal domain
          protein | LC | scaffold0089:33360-37120 | 20130731
          Length = 129

 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 26/33 (78%)

Query: 53 EVGCPRQTNSVDCGYYVIKFMKDIITHQQLVIP 85
          ++ CP QTN +DCGY+V++FMK+II   Q +IP
Sbjct: 55 KIKCPMQTNGIDCGYFVMQFMKEIILANQDMIP 87


>Medtr0089s0100.3 | Ulp1 protease family, carboxy-terminal domain
          protein | LC | scaffold0089:33301-37364 | 20130731
          Length = 96

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 26/33 (78%)

Query: 53 EVGCPRQTNSVDCGYYVIKFMKDIITHQQLVIP 85
          ++ CP QTN +DCGY+V++FMK+II   Q +IP
Sbjct: 22 KIKCPMQTNGIDCGYFVMQFMKEIILANQDMIP 54


>Medtr0089s0100.2 | Ulp1 protease family, carboxy-terminal domain
          protein | LC | scaffold0089:33055-37382 | 20130731
          Length = 96

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 26/33 (78%)

Query: 53 EVGCPRQTNSVDCGYYVIKFMKDIITHQQLVIP 85
          ++ CP QTN +DCGY+V++FMK+II   Q +IP
Sbjct: 22 KIKCPMQTNGIDCGYFVMQFMKEIILANQDMIP 54