Miyakogusa Predicted Gene

Lj2g3v0039070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0039070.1 Non Characterized Hit- tr|D8T6J0|D8T6J0_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,44.59,4e-18,LysM domain,NULL; seg,NULL; no
description,NULL; LOC443603 PROTEIN-RELATED,NULL,CUFF.34099.1
         (362 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g037450.1 | peptidoglycan-binding LysM domain protein, put...   412   e-115
Medtr6g077740.1 | peptidoglycan-binding LysM domain protein, put...   159   5e-39

>Medtr1g037450.1 | peptidoglycan-binding LysM domain protein,
           putative | HC | chr1:13809048-13813353 | 20130731
          Length = 351

 Score =  412 bits (1060), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/368 (62%), Positives = 254/368 (69%), Gaps = 25/368 (6%)

Query: 3   MERDKWNEPNNGCY--DKFLFDSDRETPSRERXXXXXXXXXXXXXXRYGYIEHPVSKLDT 60
           MER+KWNE N+  Y  ++ L D DRE+                   R GYIEH VSK DT
Sbjct: 1   MEREKWNENNSNGYFENQVLCDYDRES---------VTMSSSSSPPRLGYIEHHVSKFDT 51

Query: 61  LVGIAIKYGVEVADVKKMNSLVTDHQMFALKILHIPLPGRHPPSPCLSNGSSTPGHGDSD 120
           LVGIAIKYGVEV D+K+MNSLVTDHQMFALK + IPLPGRHPPSPCLSNGS TPG+G+S 
Sbjct: 52  LVGIAIKYGVEVTDIKRMNSLVTDHQMFALKTVQIPLPGRHPPSPCLSNGSITPGNGNST 111

Query: 121 HSSPDRAHRDLLESFQSLRVKPSERKVSAKVSPAMSSLQGYYGLKXXXXXXXXXXXXXXX 180
           HS PD AHR+LLESFQS ++K S+R    KVSPAM SLQGYYGL                
Sbjct: 112 HSPPDNAHRELLESFQSTKLKSSDR----KVSPAMISLQGYYGLPSNPSENGSSSKNSPN 167

Query: 181 XMSERPLSHHRKSKSLVNVILEEIMEKSDISLA----EGNSNNWNDKLVQRREKSVADFT 236
             S RPLS HRKSKSLVNVILEEIMEK D +      E +S   NDKLVQRR+KSVADF+
Sbjct: 168 --SYRPLSRHRKSKSLVNVILEEIMEKDDTAPGAQPWELSSVKRNDKLVQRRQKSVADFS 225

Query: 237 RIPELLLKEDNGSSGGLPSRTGKGLALRQKAASRTAVATDSESSXXXXXXXXXXDAFPXX 296
           RIPEL+L+EDN SSGGLPSRTGKGLALRQKAASRT +  DSESS          D     
Sbjct: 226 RIPELILREDNSSSGGLPSRTGKGLALRQKAASRTPLPIDSESSGLVPVPMSMGDDVQTD 285

Query: 297 XXXXXXXXXXXXCLHDQDNSGCSSSIWPASMWSLKPDLQARSTAG--KPIFDGLPKPISG 354
                       CLHDQDN  CSSSIWP+ MW+LKPDLQA STA   KPIFDGLPKP++G
Sbjct: 286 CSSGVKKSSSTSCLHDQDN--CSSSIWPSKMWNLKPDLQALSTAAIKKPIFDGLPKPLTG 343

Query: 355 RRNKAALD 362
           RRNKAALD
Sbjct: 344 RRNKAALD 351


>Medtr6g077740.1 | peptidoglycan-binding LysM domain protein,
           putative | HC | chr6:29186028-29189722 | 20130731
          Length = 338

 Score =  159 bits (401), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/334 (36%), Positives = 166/334 (49%), Gaps = 40/334 (11%)

Query: 50  YIEHPVSKLDTLVGIAIKYGVEVADVKKMNSLVTDHQMFALKILHIPLPGRHPPSPCLSN 109
           YIEH VSK DTL G+AIKYGVEVADVK+MN L +D QMFALK L IPLPGRHPPSP + +
Sbjct: 24  YIEHHVSKFDTLAGVAIKYGVEVADVKRMNGLASDLQMFALKTLRIPLPGRHPPSP-VPD 82

Query: 110 GSSTPGHGDSDHSSPDRAHRDLLESFQSLRVKPSERKVSAKVSPAMSSLQGYYGLKXXXX 169
             +      S+   P      + E  QSLR+KP ++    K+SPAM+ LQ YYGL     
Sbjct: 83  EPAKLRENSSERRPPRNGQSAMKEPLQSLRLKPPKQ----KISPAMTILQKYYGLDSSNS 138

Query: 170 XXXXXXXXXXXXMSER-------------PL-SHHRKSKSLVNVILEEIMEKSD----IS 211
                        S               P+ +HH KS +L   +L    E SD      
Sbjct: 139 RDTSGETELAMYTSSTSDHSRDDWLPKPSPIPNHHSKSTNLPFDLLTGNDEVSDYMCFTD 198

Query: 212 LAEGNSNNWNDKLVQRREKS-VADFTRIPELLLKE-DNGSSGGLPSRTGKGLALRQKAAS 269
           +++G  +  ++K V+RR+K+ V +    PE L KE +N +     S  GK  ++R K+AS
Sbjct: 199 ISDGGGDRSDEKSVRRRQKADVDNGGTTPERLFKEGNNSNGSNGSSSNGKTFSMRPKSAS 258

Query: 270 RTAVATD-SESSXXXXXXXXXXDAFPXXXXXXXXXXXXXXCLHDQDNSGCSSSIWPASMW 328
           R ++  + S+S           D+                 L +Q+    +++ WP    
Sbjct: 259 RASLFPESSDSGWLDSISVGLGDSIFVDGLSGVRKSSSASSLREQEKYNSAATAWP---- 314

Query: 329 SLKPDLQARSTAGKPIFDGLPKPISGRRNKAALD 362
                     T  KPIFDGLP PI+GRR+K ALD
Sbjct: 315 ----------TISKPIFDGLPIPITGRRSKTALD 338