Miyakogusa Predicted Gene
- Lj2g3v0039060.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0039060.1 Non Characterized Hit- tr|K3YS43|K3YS43_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si017087,34.71,8e-19,Glyco_transf_34,Galactosyl transferase;
seg,NULL; FAMILY NOT NAMED,NULL,CUFF.34096.1
(235 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g119880.1 | xyloglucan xylosyltransferase | HC | chr4:4967... 236 1e-62
Medtr8g058553.1 | xyloglucan xylosyltransferase | HC | chr8:2018... 179 3e-45
Medtr7g108675.1 | xyloglucan xylosyltransferase | HC | chr7:4426... 178 4e-45
Medtr3g037340.1 | xyloglucan xylosyltransferase | HC | chr3:1371... 118 5e-27
Medtr4g108940.1 | xyloglucan xylosyltransferase | HC | chr4:4516... 117 8e-27
Medtr4g097240.1 | galactosyl transferase GMA12/MNN10 family prot... 77 2e-14
Medtr5g015260.1 | galactosyl transferase GMA12/MNN10 family prot... 76 3e-14
Medtr4g097230.1 | galactosyl transferase GMA12/MNN10 family prot... 72 5e-13
>Medtr4g119880.1 | xyloglucan xylosyltransferase | HC |
chr4:49678173-49680110 | 20130731
Length = 454
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 133/178 (74%), Gaps = 9/178 (5%)
Query: 1 MLEQCLXXXXXXXXXXXXXXXFLTFLCLFLTVIVLRGTIGVGKFGTPEHDLDEIRH---- 56
MLE+CL LTFLCLFLTVIVLRGTIG GKFGTPE DL+EIR
Sbjct: 1 MLERCLGSRRLRQMQRAFRRGTLTFLCLFLTVIVLRGTIGAGKFGTPEQDLNEIRQQLYS 60
Query: 57 ---RVEPHRVLEEVQPENNDPNS--YATFDISKILVDEVGGDDEKRDPNAPYTFDPKISN 111
RVEPHRVLEEVQ N+ ++ YATFDI+KIL DE GDDEKRDPN PYT PKIS+
Sbjct: 61 RGRRVEPHRVLEEVQSSENNNDNNNYATFDITKILKDEEAGDDEKRDPNTPYTLGPKISD 120
Query: 112 WDQQRARWLQDHPDYPNLIRPNKSRVLLVTGSSPKLCENLVGDHYLLKSIKNKVDYCR 169
WD+QR+ WL ++PDYPN I PNK RVLLVTGSSPK CEN VGDHYLLKSIKNK+DYCR
Sbjct: 121 WDEQRSSWLSNNPDYPNFINPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCR 178
>Medtr8g058553.1 | xyloglucan xylosyltransferase | HC |
chr8:20182108-20179400 | 20130731
Length = 538
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 122/190 (64%), Gaps = 21/190 (11%)
Query: 1 MLEQCLXXXXXXXXXXXXXXXFLTFLCLFLTVIVLRGTIGVGKFGTPEHDLDEIRHRV-- 58
MLE+ L +T LCLFLT++VLRGTIG GKFGTPE D +IR+R
Sbjct: 1 MLEKYLGAQRARKFQRFLNHCKVTILCLFLTIVVLRGTIGAGKFGTPEQDFVDIRNRFSS 60
Query: 59 ----EPHRVLEEVQPENNDPN----------SYATFDISKILVDEVGGDDE-----KRDP 99
EPHR+L E+ + + +Y FDI+ ILVDE +++ KR
Sbjct: 61 RKLSEPHRILGEIHSTTSSSSRSDSSTTSTTNYNDFDINTILVDEEEEEEQGDEFEKRSS 120
Query: 100 NAPYTFDPKISNWDQQRARWLQDHPDYPNLIRPNKSRVLLVTGSSPKLCENLVGDHYLLK 159
N PY+ PKISNWD+QR++W++++P++ N IRP K RVLLVTGSSPK CEN VGDHYLLK
Sbjct: 121 NEPYSLGPKISNWDEQRSKWIRENPNFSNFIRPGKPRVLLVTGSSPKPCENPVGDHYLLK 180
Query: 160 SIKNKVDYCR 169
SIKNK+DYCR
Sbjct: 181 SIKNKIDYCR 190
>Medtr7g108675.1 | xyloglucan xylosyltransferase | HC |
chr7:44269663-44267690 | 20130731
Length = 466
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 122/190 (64%), Gaps = 21/190 (11%)
Query: 1 MLEQCLXXXXXXXXXXXXXXXFLTFLCLFLTVIVLRGTIGVGKFGTPEHDLDEIRHRV-- 58
MLE+ L +T LCLFLT++VLRGTIG GKFGTPE D +IR+R
Sbjct: 1 MLEKYLGAQRARKFQRFLNHCKVTILCLFLTIVVLRGTIGAGKFGTPEQDFVDIRNRFSS 60
Query: 59 ----EPHRVLEEVQPENNDPN----------SYATFDISKILVDEVGGDDE-----KRDP 99
EPHR+L E+ + + +Y FDI+ ILVDE +++ KR
Sbjct: 61 RKLSEPHRILGEIHSTTSSSSRSDSSTTSTTNYNDFDINTILVDEEEEEEQGDEFEKRSS 120
Query: 100 NAPYTFDPKISNWDQQRARWLQDHPDYPNLIRPNKSRVLLVTGSSPKLCENLVGDHYLLK 159
N PY+ PKISNWD+QR++W++++P++ N IRP K RVLLVTGSSPK CEN VGDHYLLK
Sbjct: 121 NEPYSLGPKISNWDEQRSKWIRENPNFSNFIRPGKPRVLLVTGSSPKPCENPVGDHYLLK 180
Query: 160 SIKNKVDYCR 169
SIKNK+DYCR
Sbjct: 181 SIKNKIDYCR 190
>Medtr3g037340.1 | xyloglucan xylosyltransferase | HC |
chr3:13716704-13713069 | 20130731
Length = 453
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 88/149 (59%), Gaps = 20/149 (13%)
Query: 23 LTFLCLFLTVIVLRGTIGVGKFGTPEHDLDEIRHRVEPHRVLEEVQPENN--DPNSYATF 80
+T LC F+T++VLRGTIGV GT ++D E +R+L E++ +++ D N TF
Sbjct: 49 ITILCGFVTILVLRGTIGV-NLGTSQNDAVNAAVIEETNRILAEIRSDSDPSDRNQTETF 107
Query: 81 DISKILVDEVGGDDEKRDPNAPYTFDPKISNWDQQRARWLQDHPDYPNLIRPNKSRVLLV 140
N Y PKI NWD +R WL + +YPN ++ K R+LL+
Sbjct: 108 ----------------MSLNETYALGPKILNWDTERTSWLDKNREYPNFVK-GKPRILLL 150
Query: 141 TGSSPKLCENLVGDHYLLKSIKNKVDYCR 169
TGS PK C+N +GDHYLLKSIKNK+DYCR
Sbjct: 151 TGSPPKPCDNPIGDHYLLKSIKNKIDYCR 179
>Medtr4g108940.1 | xyloglucan xylosyltransferase | HC |
chr4:45167661-45169567 | 20130731
Length = 448
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 91/149 (61%), Gaps = 19/149 (12%)
Query: 23 LTFLCLFLTVIVLRGTIGVGKFGTPEHDLDEIRHRV--EPHRVLEEVQPENNDPNSYATF 80
+T LC F+T++VLRGTIGV + D D + + E +R++ E++ + + +
Sbjct: 43 ITILCGFVTILVLRGTIGVNLISS---DSDAVNQNMIEETNRIIAEIRSDADPSDPDDKD 99
Query: 81 DISKILVDEVGGDDEKRDPNAPYTFDPKISNWDQQRARWLQDHPDYPNLIRPNKSRVLLV 140
+ +PNA +T PKIS+WD R WL +P+YP+ +R K+R+LL+
Sbjct: 100 NTF-------------FNPNATFTLGPKISDWDSDRKAWLNQNPEYPSFVR-GKARILLL 145
Query: 141 TGSSPKLCENLVGDHYLLKSIKNKVDYCR 169
TGS PK C+N +GDHYLLKSIKNK+DYCR
Sbjct: 146 TGSPPKPCDNPIGDHYLLKSIKNKIDYCR 174
>Medtr4g097240.1 | galactosyl transferase GMA12/MNN10 family protein
| HC | chr4:40076610-40077926 | 20130731
Length = 438
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 98 DPNAPYTFDPKISNWDQQRARWLQDHPDYPNLIRPNKSRVLLVTGSSPKLCENLVGDHYL 157
DP YT D + NWD++R WL HP + + ++L++TGS P C+N +GDH L
Sbjct: 84 DPQTCYTMDKPVKNWDEKRKEWLLHHPSF---VVGASEKILVITGSQPTKCDNPIGDHLL 140
Query: 158 LKSIKNKVDYCR 169
L+ KNKVDYCR
Sbjct: 141 LRFFKNKVDYCR 152
>Medtr5g015260.1 | galactosyl transferase GMA12/MNN10 family protein
| HC | chr5:5263011-5260836 | 20130731
Length = 446
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 67 VQPENNDPNSYATFDISKILVDEVGGDDEKRDPNAPYTFDPKISNWDQQRARWLQDHPDY 126
++ N+ SY+T D+ D+ DD P YT K+ +WD++R WL+ HP +
Sbjct: 63 LKSHKNNVVSYSTPDLRFDPPDQTFYDD----PEMEYTMSVKLEDWDEKREEWLKHHPSF 118
Query: 127 PNLIRPNKSRVLLVTGSSPKLCENLVGDHYLLKSIKNKVDYCR 169
K RVL+VTGS P C+N +GDH LL+ KNKVDY R
Sbjct: 119 S---AGAKERVLMVTGSQPSPCKNPIGDHLLLRFFKNKVDYSR 158
>Medtr4g097230.1 | galactosyl transferase GMA12/MNN10 family protein
| HC | chr4:40072089-40073357 | 20130731
Length = 422
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 98 DPNAPYTFDPKISNWDQQRARWLQDHPDYPNLIRPNKSRVLLVTGSSPKLCENLVGDHYL 157
DP Y+ + + WD++R+ WLQ HP + R+L++TGS P C+N +GDH L
Sbjct: 69 DPTLSYSVEEPMKQWDKKRSHWLQLHPSF---AAGASDRILVLTGSQPTPCKNPIGDHLL 125
Query: 158 LKSIKNKVDYCR 169
L+ KNKVDYCR
Sbjct: 126 LRCFKNKVDYCR 137