Miyakogusa Predicted Gene

Lj1g3v5062780.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5062780.2 Non Characterized Hit- tr|I1JJD2|I1JJD2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,93.43,0,PYRUVATE
DEHYDROGENASE E1 COMPONENT, BETA SUBUNIT,NULL; DEHYDROGENASE
RELATED,NULL; Thiamin diphosph,CUFF.34787.2
         (200 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g005380.2 | pyruvate dehydrogenase E1 beta subunit | HC | ...   382   e-106
Medtr7g005380.1 | pyruvate dehydrogenase E1 beta subunit | HC | ...   382   e-106
Medtr3g076630.1 | pyruvate dehydrogenase E1 beta subunit | HC | ...   177   8e-45
Medtr4g021470.1 | branched chain alpha-keto acid dehydrogenase E...   135   2e-32
Medtr7g009290.1 | pyridine-binding domain transketolase | LC | c...    91   6e-19
Medtr7g009310.1 | pyridine-binding domain transketolase | LC | c...    86   3e-17
Medtr7g009250.1 | pyruvate dehydrogenase E1 component subunit be...    61   7e-10

>Medtr7g005380.2 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr7:85481-92086 | 20130731
          Length = 361

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/201 (91%), Positives = 191/201 (95%), Gaps = 1/201 (0%)

Query: 1   MWGVTRLKTI-RPAFSSLRQFSSVAKEMTVREALNSALDEEMSADPKVFLMGEEVGEYQG 59
           M GV R K + RP+FS+ R  SS AK+MTVR+ALNSALDEEMSADPKVFLMGEEVGEYQG
Sbjct: 1   MLGVIRNKNLLRPSFSAFRHLSSSAKQMTVRDALNSALDEEMSADPKVFLMGEEVGEYQG 60

Query: 60  AYKITKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIIN 119
           AYKI+KGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGL+PVVEFMTFNFSMQAIDHIIN
Sbjct: 61  AYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIIN 120

Query: 120 SAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYASWYGSCPGLKVLSPYSSEDARG 179
           SAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHS CYASWYGSCPGLKVL+PYSSEDARG
Sbjct: 121 SAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSHCYASWYGSCPGLKVLAPYSSEDARG 180

Query: 180 LLKAAIRDPDPVVFLENELLY 200
           LLKAAIRDPDPVVFLENELLY
Sbjct: 181 LLKAAIRDPDPVVFLENELLY 201


>Medtr7g005380.1 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr7:86084-92086 | 20130731
          Length = 361

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/201 (91%), Positives = 191/201 (95%), Gaps = 1/201 (0%)

Query: 1   MWGVTRLKTI-RPAFSSLRQFSSVAKEMTVREALNSALDEEMSADPKVFLMGEEVGEYQG 59
           M GV R K + RP+FS+ R  SS AK+MTVR+ALNSALDEEMSADPKVFLMGEEVGEYQG
Sbjct: 1   MLGVIRNKNLLRPSFSAFRHLSSSAKQMTVRDALNSALDEEMSADPKVFLMGEEVGEYQG 60

Query: 60  AYKITKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIIN 119
           AYKI+KGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGL+PVVEFMTFNFSMQAIDHIIN
Sbjct: 61  AYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIIN 120

Query: 120 SAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYASWYGSCPGLKVLSPYSSEDARG 179
           SAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHS CYASWYGSCPGLKVL+PYSSEDARG
Sbjct: 121 SAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSHCYASWYGSCPGLKVLAPYSSEDARG 180

Query: 180 LLKAAIRDPDPVVFLENELLY 200
           LLKAAIRDPDPVVFLENELLY
Sbjct: 181 LLKAAIRDPDPVVFLENELLY 201


>Medtr3g076630.1 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr3:34442945-34446106 | 20130731
          Length = 403

 Score =  177 bits (448), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 83/175 (47%), Positives = 118/175 (67%)

Query: 26  EMTVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKITKGLLEKYGPERVLDTPITEAG 85
           E+ + EAL   L+EEM  DP V +MGE+VG Y G+YK+T+ L EK+G  RVLDTPI E  
Sbjct: 82  ELLLFEALREGLEEEMERDPCVCVMGEDVGHYGGSYKVTRNLAEKFGDLRVLDTPIAENA 141

Query: 86  FTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAA 145
           FTG+G+GAA  GLRP++E M   F + A + I N+    +Y S GQ  +P+V RGP G  
Sbjct: 142 FTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFKIPVVIRGPGGVG 201

Query: 146 AGVGAQHSQCYASWYGSCPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLY 200
             +GA+HSQ   S++ S PG+++++  +  +A+GL+KAAIR  +PV+  E+ LLY
Sbjct: 202 RQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSDNPVILFEHVLLY 256


>Medtr4g021470.1 | branched chain alpha-keto acid dehydrogenase E1
           beta subunit | HC | chr4:6990880-6984927 | 20130731
          Length = 358

 Score =  135 bits (340), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 103/177 (58%), Gaps = 2/177 (1%)

Query: 25  KEMTVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKITKGLLEKYGPERVLDTPITEA 84
           K + +  A+N AL   +  DP+ ++ GE+VG + G ++ T GL +++G +RV +TP+ E 
Sbjct: 36  KSLNLYSAVNQALHIALDTDPRAYVFGEDVG-FGGVFRCTTGLADRFGKKRVFNTPLCEQ 94

Query: 85  GFTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINV-PIVFRGPNG 143
           G  G G+G A  G R + E    ++   A D I+N AAK  Y S  Q N   +  R P G
Sbjct: 95  GIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYG 154

Query: 144 AAAGVGAQHSQCYASWYGSCPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLY 200
           A    G  HSQ   +++   PG+KV+ P S ++A+GLL + IRDP+P+VF E + LY
Sbjct: 155 AVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPKEAKGLLLSCIRDPNPIVFFEPKWLY 211


>Medtr7g009290.1 | pyridine-binding domain transketolase | LC |
           chr7:2001810-2002973 | 20130731
          Length = 89

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 3/69 (4%)

Query: 131 QINVPIVFRGPNGAAAGVGAQHSQCYASWYGSCPGLKVLSPYSSEDARGLLKAAIRDPDP 190
           +INV +   GP      +    ++CYAS YGSCPG KVL+PYSSEDARGLLKAAIRDPDP
Sbjct: 9   KINVLLKKYGPERV---LDTPITECYASCYGSCPGFKVLAPYSSEDARGLLKAAIRDPDP 65

Query: 191 VVFLENELL 199
            VFLENEL 
Sbjct: 66  AVFLENELF 74


>Medtr7g009310.1 | pyridine-binding domain transketolase | LC |
           chr7:2004363-2009385 | 20130731
          Length = 84

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 38/41 (92%), Positives = 40/41 (97%)

Query: 159 WYGSCPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELL 199
           WYGSCPGLKVL+PYSS+DARGLLKAAIRDPDP VFLENELL
Sbjct: 6   WYGSCPGLKVLAPYSSDDARGLLKAAIRDPDPAVFLENELL 46


>Medtr7g009250.1 | pyruvate dehydrogenase E1 component subunit beta
           | HC | chr7:1979798-1980901 | 20130731
          Length = 117

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 39/55 (70%)

Query: 84  AGFTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVF 138
           AGFT IGVGAAYYGL+PV+EFMTFNFSMQ   +  +  A+    +A +   P+VF
Sbjct: 7   AGFTRIGVGAAYYGLKPVLEFMTFNFSMQTRCNKFSEDARGLLKAAIRDPDPVVF 61



 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 9/53 (16%)

Query: 157 ASWYGSCPGLKVLS-PYS--------SEDARGLLKAAIRDPDPVVFLENELLY 200
           A++YG  P L+ ++  +S        SEDARGLLKAAIRDPDPVVFLENELLY
Sbjct: 16  AAYYGLKPVLEFMTFNFSMQTRCNKFSEDARGLLKAAIRDPDPVVFLENELLY 68