Miyakogusa Predicted Gene

Lj1g3v5062660.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5062660.1 Non Characterized Hit- tr|I1JS72|I1JS72_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39925
PE,71.74,0,Pumilio-like repeats,Pumilio RNA-binding repeat; ARM
repeat,Armadillo-type fold; PUM,Pumilio RNA-bin,CUFF.34029.1
         (740 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g117545.1 | pumilio-family RNA-binding repeatprotein | HC ...  1028   0.0  

>Medtr7g117545.1 | pumilio-family RNA-binding repeatprotein | HC |
           chr7:48703739-48696573 | 20130731
          Length = 743

 Score = 1028 bits (2657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/695 (73%), Positives = 576/695 (82%), Gaps = 15/695 (2%)

Query: 56  RVRKQIDPETTTYFSEIANXXXXXXXXXXXXXXICANALEETRGKEFEIATDYILSHTLE 115
           R+RKQ+DPETT Y S+I+N              ICANALEET+GKEFEIATDYILSHTLE
Sbjct: 54  RIRKQVDPETTKYLSQISNLFESDGVALEERSLICANALEETKGKEFEIATDYILSHTLE 113

Query: 116 TILQGSDVDSLCAFLKTCANDFPSIATDQSGSHVAQTAINSLALHLQ-------DPLVED 168
           TILQG DVD+LCAFL + AN FP IA D+SGSHVAQTAINSLA HLQ         LVE+
Sbjct: 114 TILQGCDVDNLCAFLHSSANQFPFIAMDRSGSHVAQTAINSLASHLQYDYDQHTHSLVEE 173

Query: 169 ALTIICKVIAANSVDVMCNCYGSHVLRSLLCLCKGVPLDKTGYYMSKSTTALADRFNFKD 228
           ALT+IC VIAANS+DVMCNCYGSHVLR+LLCLCKGVPLD +G+Y+SKSTTALA+R NFK 
Sbjct: 174 ALTLICNVIAANSLDVMCNCYGSHVLRTLLCLCKGVPLDNSGFYLSKSTTALAERLNFKQ 233

Query: 229 FPSKKDDAADFQSGYPNLLRSLVSEMLKQARKCIKALQVDQFSSLVFQTTLRVLAGNDEE 288
           F S KD    F SG+P LL SLVS+M   A K IK+LQ+DQFSSLVFQTTLRVLAGNDE 
Sbjct: 234 FSSNKDA---FHSGFPILLNSLVSQMFNHATKYIKSLQLDQFSSLVFQTTLRVLAGNDEL 290

Query: 289 LLHVIPVILGCKNQNNAEGNFIETTVVPQLLSLFKEAEFSHLMEVVLEVSPKALFNELFT 348
           LL VIP++LGCKN+NNAEGN IET +VP+L +LFKE  FSHLMEVVLEVSP ALFNELFT
Sbjct: 291 LLDVIPILLGCKNKNNAEGNLIETAIVPELKNLFKEPGFSHLMEVVLEVSPVALFNELFT 350

Query: 349 KVFRNSLFELSSHQHGNFVVQALISHANNQDLMELIYEELAPNMEGLFQMGRSGVVASLI 408
           KVFRNSLFELSSHQHGNFVVQALISHA++QDLMELI++EL PNMEGLFQMGRSGVVASLI
Sbjct: 351 KVFRNSLFELSSHQHGNFVVQALISHASDQDLMELIWDELRPNMEGLFQMGRSGVVASLI 410

Query: 409 AACERLHVNEHKCCEVLAKTVCLADDSPKWIVPRLLFLDSYFTCEDKSNWSWRSGARMNV 468
           AACERLH+NEHKCC+VLAKTVCLAD+S KWIVPRLLFLDSYF CEDKS+W W+SGA+MNV
Sbjct: 411 AACERLHINEHKCCQVLAKTVCLADESSKWIVPRLLFLDSYFNCEDKSSWIWQSGAKMNV 470

Query: 469 MGSLILQAIFRFKSEYIQPYITSITSMEATHVLEAVRDAKGSHVIEAFLCSGASGKQKRR 528
           MGSLILQ+IFRF SEYI+P+ITSITSM+  HVLEAV++A+GSHVIEAFLCSGA GKQKRR
Sbjct: 471 MGSLILQSIFRFNSEYIKPFITSITSMDTAHVLEAVKNARGSHVIEAFLCSGAPGKQKRR 530

Query: 529 LVTKLQSHFGEVALNSSGAFTIEKCFTSCNLSLREAIVSEILAVRSELSKTKQGSYLLRR 588
           LV KLQ HFGEVAL+SSGAFTIEKCFT+CNLSLRE IVSE+LAV+SELSKTKQGSYLLR+
Sbjct: 531 LVAKLQGHFGEVALHSSGAFTIEKCFTACNLSLRETIVSELLAVQSELSKTKQGSYLLRK 590

Query: 589 LDVDGYVTSPDHWRSKQTSKESTYKDFYATFGSNDTKSSKTDGFLSDTF-SKSNPKTVKE 647
           LDVDG+  SPDHWRSKQ SKESTYK+FYATFGS+DT+S+K DGFL+DT  +K N   VKE
Sbjct: 591 LDVDGFAASPDHWRSKQASKESTYKEFYATFGSSDTRSTKNDGFLADTSNNKPNSNNVKE 650

Query: 648 MRKEIDQSLGPAASFLSTDGFXXXXXXXXXXXXXXAQIGGDDDN--XXXXXXXXXXVESG 705
           MRKEIDQSLG ++SFLSTDGF              A+IGG++D+            VESG
Sbjct: 651 MRKEIDQSLG-SSSFLSTDGFNRNPKKAKQKNKKNAEIGGNEDDSSRKKKRSKKEKVESG 709

Query: 706 DDITSNPASKKTLKKRQRDGDVSEVFVKKLKASDK 740
            D T+   + KT KKRQR+ D SE   KKLK SD+
Sbjct: 710 YD-TAGTKAAKTAKKRQRNRDASEASGKKLKTSDE 743