Miyakogusa Predicted Gene

Lj1g3v5060720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5060720.1 tr|A9SNI1|A9SNI1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_165894,30.95,4e-19,seg,NULL; DUF4308,Domain of unknown
function DUF4308,CUFF.33970.1
         (170 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g118290.1 | thylakoid membrane phosphoprotein 14 kDa prote...   177   5e-45
Medtr8g024180.1 | thylakoid membrane phosphoprotein 14 kDa prote...   152   2e-37
Medtr7g118290.2 | thylakoid membrane phosphoprotein 14 kDa prote...   125   1e-29
Medtr7g118290.3 | thylakoid membrane phosphoprotein 14 kDa prote...    98   3e-21
Medtr7g118290.4 | thylakoid membrane phosphoprotein 14 kDa prote...    98   3e-21
Medtr4g013200.1 | thylakoid membrane phosphoprotein 14 kDa prote...    89   2e-18
Medtr7g116795.1 | thylakoid membrane phosphoprotein 14 kDa prote...    78   3e-15
Medtr5g032440.1 | threonine endopeptidase | HC | chr5:13932332-1...    69   3e-12

>Medtr7g118290.1 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr7:49092785-49094059 | 20130731
          Length = 180

 Score =  177 bits (449), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 92/160 (57%), Positives = 103/160 (64%), Gaps = 12/160 (7%)

Query: 17  FVDGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXX 76
            VDGK P +   AS QCVS               WK TAFCRK+ARNV+           
Sbjct: 15  LVDGKPPCRHSAASPQCVSLPPLQSHTRP-----WKTTAFCRKIARNVISMASSTTTETE 69

Query: 77  XXXXXXLNGG-------ELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAI 129
                            + PE VKTIQ+ WDKVEDKYAVS+L VAG VALWGSAGVISAI
Sbjct: 70  ADAATTEVASTDPSTVTDSPELVKTIQQTWDKVEDKYAVSALAVAGTVALWGSAGVISAI 129

Query: 130 DRIPLVPGVLEVVGIGYTGWFAYKNLVFKPDREALFRKVK 169
           DR+PL+PGVLE+VGIGYTGWFAYKNLVFKP+REAL RK+K
Sbjct: 130 DRLPLIPGVLELVGIGYTGWFAYKNLVFKPEREALIRKIK 169


>Medtr8g024180.1 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr8:8854877-8852692 | 20130731
          Length = 170

 Score =  152 bits (383), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 8/152 (5%)

Query: 19  DGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXXXX 78
           D KA  QS T+S QCVS                K T   RK+AR+VM             
Sbjct: 18  DCKASFQSSTSSPQCVSLSSLPSLPLLSQNHALKTTHH-RKIARDVMVMATGDAPTE--- 73

Query: 79  XXXXLNGGELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGV 138
               ++  ELPEFVK +QEAWDK +D+YAVSSL VA   ALW   G+ISAIDR+PL+PGV
Sbjct: 74  ----VDSTELPEFVKNLQEAWDKYDDRYAVSSLVVASVFALWSLTGLISAIDRLPLIPGV 129

Query: 139 LEVVGIGYTGWFAYKNLVFKPDREALFRKVKE 170
           LE++GIGYTGWFAYKN+VFKP+RE L +KVKE
Sbjct: 130 LELIGIGYTGWFAYKNVVFKPEREELIQKVKE 161


>Medtr7g118290.2 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr7:49092799-49094059 | 20130731
          Length = 159

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/160 (46%), Positives = 82/160 (51%), Gaps = 33/160 (20%)

Query: 17  FVDGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXX 76
            VDGK P +   AS QCVS               WK TAFCRK+ARNV+           
Sbjct: 15  LVDGKPPCRHSAASPQCVSLPPLQSHTRP-----WKTTAFCRKIARNVISMASSTTTETE 69

Query: 77  XXXXXXLNGG-------ELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAI 129
                            + PE VKTIQ+ WDKVEDKYAVS+L VAG VALWGSAGVIS  
Sbjct: 70  ADAATTEVASTDPSTVTDSPELVKTIQQTWDKVEDKYAVSALAVAGTVALWGSAGVIS-- 127

Query: 130 DRIPLVPGVLEVVGIGYTGWFAYKNLVFKPDREALFRKVK 169
                              WFAYKNLVFKP+REAL RK+K
Sbjct: 128 -------------------WFAYKNLVFKPEREALIRKIK 148


>Medtr7g118290.3 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr7:49092799-49094059 | 20130731
          Length = 158

 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 70/137 (51%), Gaps = 17/137 (12%)

Query: 17  FVDGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXX 76
            VDGK P +   AS QCVS               WK TAFCRK+ARNV+           
Sbjct: 15  LVDGKPPCRHSAASPQCVSLPPLQSHTRP-----WKTTAFCRKIARNVISMASSTTTETE 69

Query: 77  XXXXXXLNGG-------ELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAI 129
                            + PE VKTIQ+ WDKVEDKYAVS+L VAG VALWGSAGVIS  
Sbjct: 70  ADAATTEVASTDPSTVTDSPELVKTIQQTWDKVEDKYAVSALAVAGTVALWGSAGVIS-- 127

Query: 130 DRIPLVPGVLEVVGIGY 146
             + L+P  L +  I Y
Sbjct: 128 --VSLLP-FLHIYYINY 141


>Medtr7g118290.4 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr7:49092799-49094059 | 20130731
          Length = 158

 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 70/137 (51%), Gaps = 17/137 (12%)

Query: 17  FVDGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXX 76
            VDGK P +   AS QCVS               WK TAFCRK+ARNV+           
Sbjct: 15  LVDGKPPCRHSAASPQCVSLPPLQSHTRP-----WKTTAFCRKIARNVISMASSTTTETE 69

Query: 77  XXXXXXLNGG-------ELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAI 129
                            + PE VKTIQ+ WDKVEDKYAVS+L VAG VALWGSAGVIS  
Sbjct: 70  ADAATTEVASTDPSTVTDSPELVKTIQQTWDKVEDKYAVSALAVAGTVALWGSAGVIS-- 127

Query: 130 DRIPLVPGVLEVVGIGY 146
             + L+P  L +  I Y
Sbjct: 128 --VSLLP-FLHIYYINY 141


>Medtr4g013200.1 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr4:3579932-3583601 | 20130731
          Length = 146

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 56/78 (71%)

Query: 93  KTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGWFAY 152
           K++Q  WDK ED+  +  LG A  VALW S  +I+AID++P++P  LE++GI ++ WF Y
Sbjct: 61  KSVQNVWDKPEDRLGLFGLGFAAVVALWASTNLIAAIDKLPVIPISLELIGILFSVWFTY 120

Query: 153 KNLVFKPDREALFRKVKE 170
           + L+FKPDRE LF+ + +
Sbjct: 121 RYLLFKPDREELFQILNK 138


>Medtr7g116795.1 | thylakoid membrane phosphoprotein 14 kDa protein
           | HC | chr7:48250629-48252424 | 20130731
          Length = 161

 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 51/75 (68%)

Query: 90  EFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGW 149
           E    ++E WD +E+K  V   G  G VA+W S+ ++ AI+ +PL+P ++E+VG+GYTGW
Sbjct: 72  ELFTDLKEKWDALENKSTVLLYGGGGLVAVWLSSILVGAINSVPLLPKIMELVGLGYTGW 131

Query: 150 FAYKNLVFKPDREAL 164
           F Y+ L+FK  R+ L
Sbjct: 132 FVYRYLLFKSSRKEL 146


>Medtr5g032440.1 | threonine endopeptidase | HC |
           chr5:13932332-13928123 | 20130731
          Length = 182

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 47/69 (68%)

Query: 102 VEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGWFAYKNLVFKPDR 161
           + D  +++  G    VALW ++ ++ A+D IP++P + EVVG+GY+ WF Y+ L+FK +R
Sbjct: 106 INDTTSLAVYGGGAIVALWLTSAIVGAVDSIPVIPKLFEVVGLGYSLWFTYRYLLFKRNR 165

Query: 162 EALFRKVKE 170
           E L  K++E
Sbjct: 166 EELANKIEE 174