Miyakogusa Predicted Gene

Lj1g3v5038190.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5038190.3 Non Characterized Hit- tr|Q55DE9|Q55DE9_DICDI
Putative uncharacterized protein OS=Dictyostelium
disc,29.63,0.00000000000001,GHMP Kinase, C-terminal domain,NULL; no
description,NULL; GHMP_kinases_C,GHMP kinase, C-terminal
dom,CUFF.34013.3
         (171 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g117870.1 | L-fucokinase/GDP-L-fucose pyrophosphorylase | ...   251   2e-67

>Medtr7g117870.1 | L-fucokinase/GDP-L-fucose pyrophosphorylase | HC |
            chr7:48918542-48912166 | 20130731
          Length = 1049

 Score =  251 bits (641), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 124/151 (82%), Positives = 130/151 (86%)

Query: 17   VPLLASPELISELQQRLLVVFTGQVRLAKKVLQKVVTRYLRRDNLLVSSIKRLVELAKIG 76
            VPLLASP+LISELQQRLLVVFTGQVRLAKKVLQKVV RYLRRDNLLVSSIKRLVELAKIG
Sbjct: 896  VPLLASPQLISELQQRLLVVFTGQVRLAKKVLQKVVIRYLRRDNLLVSSIKRLVELAKIG 955

Query: 77   REALMNCEIDEFGEIMLEAWRLHQELDPFCSNESVDRLFSFASPYCCGYKLVXXXXXXXX 136
            REALMNC+IDE GEIMLEAWRLHQELDP+CSN+ VD+LFSFASPYCCGYKLV        
Sbjct: 956  REALMNCDIDELGEIMLEAWRLHQELDPYCSNDFVDKLFSFASPYCCGYKLVGAGGGGFA 1015

Query: 137  XXXXRDKQLAKGLRHRLEDEKHFEVKIYDWQ 167
                +D Q AK LR RLEDEK F VKIYDWQ
Sbjct: 1016 LLIAKDTQRAKELRQRLEDEKDFGVKIYDWQ 1046