Miyakogusa Predicted Gene

Lj1g3v5038190.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5038190.2 tr|C6JAN9|C6JAN9_9FIRM L-fucokinase
domain-containing protein (Fragment) OS=Ruminococcus sp.
5_1_39B,24.77,0.0000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Fucokinase,L-fucokinase; seg,NULL,CUFF.34013.2
         (407 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g117870.1 | L-fucokinase/GDP-L-fucose pyrophosphorylase | ...   543   e-154

>Medtr7g117870.1 | L-fucokinase/GDP-L-fucose pyrophosphorylase | HC
           | chr7:48918542-48912166 | 20130731
          Length = 1049

 Score =  543 bits (1399), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 266/327 (81%), Positives = 288/327 (88%), Gaps = 2/327 (0%)

Query: 83  KHILLFHAGGDSKRVPWANPMGKVFLPLPYLASDEPDGPVPLLFDHILAIASCARQAFGD 142
           KH+LL HAGGDSKRVPWANPMGKVFLPLP+LA DEPDGPVPLLFDHILAIASCARQAF D
Sbjct: 109 KHVLLLHAGGDSKRVPWANPMGKVFLPLPFLADDEPDGPVPLLFDHILAIASCARQAFRD 168

Query: 143 QGGMLTMTGDVLPCFDASVMILPNDTSCIITVPITLDVASNHGVIVAAETE-RSTKSYAV 201
           QGGMLTMTGDVLPCFDASVM LP DTSCIITVPITLDVASNHGVIVAAETE  S ++YA+
Sbjct: 169 QGGMLTMTGDVLPCFDASVMTLPEDTSCIITVPITLDVASNHGVIVAAETEVHSNQNYAL 228

Query: 202 SLVDNLLQKPTLEELVENKAVLADGRTLLDTGIIAVRGKAWLELVTLACSCQPMISELLE 261
           SLVDNLLQKPT++ELV++KAVL DGRTLLDTGIIAVRGKAWL+LVTLACS Q MIS+L+ 
Sbjct: 229 SLVDNLLQKPTVDELVQSKAVLVDGRTLLDTGIIAVRGKAWLDLVTLACSSQEMISDLIR 288

Query: 262 SKKEMSLYEDLVAAWVPAKHEWLRKRPLGEELVNKLGKHKMFSYCAYDLLFLHFGTSSEV 321
           S+KEMSLYEDLVAAWVPAKHEWLRKRPLGEELVN+LG  +M SYCAYDLLFLHFGTS+EV
Sbjct: 289 SRKEMSLYEDLVAAWVPAKHEWLRKRPLGEELVNRLGNQRMLSYCAYDLLFLHFGTSNEV 348

Query: 322 LDHLSGAGSELVGRRHMCXXXXXXXXXXXXXXXXXXXEIAPGVSIGEDSLIYDSSISAGI 381
           LDHLSG GS+LVGRRH+C                   +IAPGVS+GEDSLIYDSSIS GI
Sbjct: 349 LDHLSGVGSDLVGRRHICSIPATTASDITASAIILSSKIAPGVSVGEDSLIYDSSISGGI 408

Query: 382 HIGSLCIVVGVNISLD-DYICTEDSIK 407
           HIGSLCIVVG +ISLD DYIC EDS+K
Sbjct: 409 HIGSLCIVVGASISLDHDYICAEDSMK 435