Miyakogusa Predicted Gene

Lj1g3v5038150.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5038150.2 Non Characterized Hit- tr|C6TJT9|C6TJT9_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,52.17,3e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; LRAT,LRAT-like domain,CUFF.33979.2
         (258 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g117750.1 | lecithin retinol acyltransferase | HC | chr7:4...   399   e-111
Medtr1g057650.1 | lecithin retinol acyltransferase | HC | chr1:2...   242   3e-64
Medtr5g076250.1 | lecithin retinol acyltransferase | HC | chr5:3...   220   9e-58
Medtr3g064020.1 | lecithin retinol acyltransferase | LC | chr3:2...   186   2e-47
Medtr3g063990.1 | lecithin retinol acyltransferase | LC | chr3:2...   149   2e-36

>Medtr7g117750.1 | lecithin retinol acyltransferase | HC |
           chr7:48908813-48907086 | 20130731
          Length = 259

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/259 (76%), Positives = 222/259 (85%), Gaps = 1/259 (0%)

Query: 1   MGLLSHRVERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERNFKSTTETSSNLD 60
           MGL+S+R+E+H++KPGDH+YTYRA+F+YSHHG+FVGGSKVVHFRP+RNFKS TETSSN+D
Sbjct: 1   MGLISNRIEKHDIKPGDHVYTYRAVFSYSHHGIFVGGSKVVHFRPDRNFKSITETSSNVD 60

Query: 61  DSTSTPCEIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTAFFTKVRGGTCTTA 120
           D T TPC  FPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPT F T++RGGTCTTA
Sbjct: 61  DPTPTPCPTFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTLFLTRIRGGTCTTA 120

Query: 121 SSDPPETVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKQGVGRSGQASSIVG 180
             DPPETVIHRAMYLLQNGFGNY+VFQNNCEDFA+YCKTGLLI+DKQGVGRSGQASS++G
Sbjct: 121 LPDPPETVIHRAMYLLQNGFGNYDVFQNNCEDFAMYCKTGLLIVDKQGVGRSGQASSVIG 180

Query: 181 XXXXXXXXXXXXXXXXXXVGVATVTAGMYCMSRYATDIGVRSDVIKVGVEDLAVNLGW-T 239
                             VG+ATVTAGMYCMSRYATDIGVRSDV+KVGVEDLAVNLGW T
Sbjct: 181 APLAAMLSSPLKLLMPSPVGMATVTAGMYCMSRYATDIGVRSDVVKVGVEDLAVNLGWTT 240

Query: 240 CPEEEIAAEDETSGSLITI 258
           C +EE    D T+ S I I
Sbjct: 241 CSDEEEVVGDGTANSPIII 259


>Medtr1g057650.1 | lecithin retinol acyltransferase | HC |
           chr1:25342939-25339608 | 20130731
          Length = 264

 Score =  242 bits (617), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 118/235 (50%), Positives = 155/235 (65%), Gaps = 4/235 (1%)

Query: 1   MGLLSHRVERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERNFKSTTETSSNLD 60
           MGLLS+RV R  +K GDHIY++R  + Y+HHG+++G  KV+HF   R  +  T T  ++ 
Sbjct: 1   MGLLSNRVTRESLKAGDHIYSWRTAYIYAHHGIYIGDDKVIHF-TRRGQEVGTGTVLDVL 59

Query: 61  DSTSTPC---EIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTAFFTKVRGGTC 117
             +S P    EI P C   Q + GVV+SCL+CFL  G LY FEY VSP  F  K RGGTC
Sbjct: 60  LLSSAPARSQEICPICIPSQEDHGVVVSCLNCFLAGGVLYRFEYAVSPALFLAKARGGTC 119

Query: 118 TTASSDPPETVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKQGVGRSGQASS 177
           T A SD  + V+HRA+YLL+NGF  YNVF+NNCEDFA+YCKTGL+++D++ +G+SGQA S
Sbjct: 120 TLAVSDEDDVVVHRALYLLENGFRCYNVFKNNCEDFAIYCKTGLVVVDERTIGQSGQAVS 179

Query: 178 IVGXXXXXXXXXXXXXXXXXXVGVATVTAGMYCMSRYATDIGVRSDVIKVGVEDL 232
           I+G                   G+A    G+YC SRYA DIG+R DV+K+ VE+L
Sbjct: 180 IIGGPLAAVLSTPLRLVTTNVYGMAATAVGVYCASRYAADIGMRRDVVKIQVEEL 234


>Medtr5g076250.1 | lecithin retinol acyltransferase | HC |
           chr5:32478491-32483095 | 20130731
          Length = 254

 Score =  220 bits (561), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 122/258 (47%), Positives = 154/258 (59%), Gaps = 13/258 (5%)

Query: 1   MGLLSHRVERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERNFKSTTET----- 55
           MG+ S++++  ++ PGDHIY++R  + Y+HHG++VG   V+HF      +  T T     
Sbjct: 1   MGVFSNKIDHEQLNPGDHIYSWRQAYIYAHHGIYVGDGMVLHFTRGGGQEIGTGTVLDRF 60

Query: 56  --SSNLDDSTSTPCEIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTAFFTKVR 113
             SS+  + T TPC   P CG +    GVV SCLDCFL   +LY FEYGVS   F  K R
Sbjct: 61  LCSSSPSNGTDTPC---PKCGDQNKTDGVVSSCLDCFLSGDNLYLFEYGVSAAYFLAKAR 117

Query: 114 GGTCTTASSDPPETVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKQGVGRSG 173
           GGTCT A SDP E V+ RA +L +NGFG YNVF NNCEDFA+YCKTGLLI+    VGRSG
Sbjct: 118 GGTCTLAVSDPTEDVLRRASFLFENGFGGYNVFNNNCEDFAIYCKTGLLIITSISVGRSG 177

Query: 174 QASSIVGXXXXXXXXXXXXXXXXXXVGVATVTAGMYCMSRYATDIGVRSDVIKVGVEDLA 233
           QA+S +                    G+A V  GMYC+SR+ +DIGVR DV KV VE L 
Sbjct: 178 QAASCLAAASAVISTPLRFMTTSFS-GLAAVGYGMYCVSRFVSDIGVRRDVSKVPVEKLV 236

Query: 234 VNLGWTCPEE--EIAAED 249
                  PE+  E+  ED
Sbjct: 237 ALPDIDEPEKTPEVTKED 254


>Medtr3g064020.1 | lecithin retinol acyltransferase | LC |
           chr3:28791368-28790464 | 20130731
          Length = 251

 Score =  186 bits (472), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/234 (43%), Positives = 134/234 (57%), Gaps = 13/234 (5%)

Query: 1   MGLLSHRVERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERNFKSTTE------ 54
           M +LS++++R ++K GDHIY++R  + Y+HHG+++G   V+HF      ++T        
Sbjct: 1   MEVLSNKIDRKQLKTGDHIYSWRQAYVYAHHGIYIGDEMVIHFTIGSGQQATGIPAILDR 60

Query: 55  --TSSNLDDSTSTPCEIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTAFFTKV 112
             TSS     T  PC+   +      N GV  SCLDCFL  G LY F+YGVS   F  + 
Sbjct: 61  FFTSSAPSFDTKLPCQRCREAA-ETRNHGVFSSCLDCFLSGGQLYLFQYGVSKLQFLAQA 119

Query: 113 RGGTCTTASSDPPETVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLILDKQGVGRS 172
           RGGTCT ASSDP E V+ RA+YLL+ GFG Y++ +NNCEDFA+YCKTGL    K   G S
Sbjct: 120 RGGTCTLASSDPTEEVLPRALYLLEKGFGCYHISKNNCEDFAVYCKTGLFATTK---GCS 176

Query: 173 GQASSIVGXXXXXXXXXXXXXXXXXXVGVATVTAGMYCMSRYATDIGVRSDVIK 226
           GQA+S +                    G A V  G YC+ R  +DIG R +VIK
Sbjct: 177 GQAASYLA-ATSTVASSSFRFVNSSLFGKALVGCGTYCIKRLVSDIGFRYEVIK 229


>Medtr3g063990.1 | lecithin retinol acyltransferase | LC |
           chr3:28784361-28783379 | 20130731
          Length = 272

 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 126/261 (48%), Gaps = 58/261 (22%)

Query: 8   VERHEMKPGDHIYTYRAIFTYSHHGVFVGGSKVVHFRPERNFKSTTETSSN--------- 58
           ++R ++K GDHIY++R  + Y+HHG++VG   V+HF      ++ T T SN         
Sbjct: 2   IDRKQLKAGDHIYSWRQAYIYAHHGIYVGDGMVIHFTDGAIQQTETPTISNRFCSSSVPS 61

Query: 59  -----------------------------------LDDSTSTPCEIFPDCGFRQPNSGVV 83
                                              LD  T  PC    DC  +    GV+
Sbjct: 62  CRSSVPSCRSSVPSSRSSVPSCRSSVPSCRSSVPSLD--TDIPCPRCGDCC-QTKMHGVI 118

Query: 84  LSCLDCFLRNGSLYCFEYGVSPTAFFTKVRGGTCTTASSDPPETVIHRAMYLLQNGFGNY 143
           LSCLDCFL  G L+ + YGVS   F  + RGGTCT ASSDP + V+ RA+YLL+NGFG+Y
Sbjct: 119 LSCLDCFLSEGGLHRYLYGVSTLHFIVQARGGTCTRASSDPTKEVLFRALYLLENGFGDY 178

Query: 144 NVFQNNCEDFALYCKTGLLILDKQGVGRSGQASSIVGXXXXXXXXXX--XXXXXXXXVGV 201
           + ++NNCEDFA+YCKTG L       G SGQA+S                       +G 
Sbjct: 179 HFYKNNCEDFAIYCKTGFL----SSEGGSGQAASYWAGAISIASTALGYFVPIYKPLIGC 234

Query: 202 ATVTAGMYCMSRYATDIGVRS 222
           AT     Y   R  +DIG RS
Sbjct: 235 AT-----YSCDRLVSDIGYRS 250