Miyakogusa Predicted Gene

Lj1g3v5037140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5037140.1 Non Characterized Hit- tr|I3SV35|I3SV35_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,50.54,0.00000009,seg,NULL,CUFF.33967.1
         (87 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g027295.2 | Dof-type zinc finger DNA-binding family protei...    47   4e-06
Medtr8g027295.1 | Dof-type zinc finger DNA-binding family protei...    47   4e-06

>Medtr8g027295.2 | Dof-type zinc finger DNA-binding family protein |
           HC | chr8:9594622-9592389 | 20130731
          Length = 269

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 19/91 (20%)

Query: 1   MGNYHHGHGMSSPYVEMGHETSNYHISSSCSAAPIDXXXXXXXXXXXXNPY-----VVMP 55
           M NYHH HGM S YVEM       H ++  S++ +D            NPY     + +P
Sbjct: 126 MENYHHNHGMPSSYVEM-------HNNNESSSSALD-LLRSSMASRGMNPYANNNNLGLP 177

Query: 56  MSSNSHYPASGTGFPMQEMKPTLGLGFSLDG 86
            +SN+ YP+   GF MQE+KP+  LGFS+DG
Sbjct: 178 -NSNAIYPS---GFTMQEVKPS--LGFSIDG 202


>Medtr8g027295.1 | Dof-type zinc finger DNA-binding family protein |
           HC | chr8:9594461-9592389 | 20130731
          Length = 269

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 19/91 (20%)

Query: 1   MGNYHHGHGMSSPYVEMGHETSNYHISSSCSAAPIDXXXXXXXXXXXXNPY-----VVMP 55
           M NYHH HGM S YVEM       H ++  S++ +D            NPY     + +P
Sbjct: 126 MENYHHNHGMPSSYVEM-------HNNNESSSSALD-LLRSSMASRGMNPYANNNNLGLP 177

Query: 56  MSSNSHYPASGTGFPMQEMKPTLGLGFSLDG 86
            +SN+ YP+   GF MQE+KP+  LGFS+DG
Sbjct: 178 -NSNAIYPS---GFTMQEVKPS--LGFSIDG 202