Miyakogusa Predicted Gene

Lj1g3v5034870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5034870.1 Non Characterized Hit- tr|K4D9P6|K4D9P6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,89.8,2e-19,FAMILY NOT NAMED,NULL; DUF966,Protein of unknown
function DUF966,NODE_121824_length_114_cov_11.061403.path2.1
         (52 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084275.1 | auxin-regulated protein | HC | chr2:35459148-3...   103   3e-23
Medtr4g057330.1 | auxin-regulated protein | HC | chr4:20983812-2...   102   8e-23
Medtr4g063130.1 | auxin-regulated protein | HC | chr4:23360644-2...    73   5e-14
Medtr4g063130.2 | auxin-regulated protein | HC | chr4:23360647-2...    72   9e-14
Medtr1g115370.1 | DUF966 domain protein | HC | chr1:52069779-520...    69   9e-13
Medtr8g091300.1 | DUF966 domain protein | HC | chr8:38095364-380...    64   2e-11
Medtr2g062310.1 | DUF966 domain protein | HC | chr2:26306172-263...    59   1e-09

>Medtr2g084275.1 | auxin-regulated protein | HC |
           chr2:35459148-35463284 | 20130731
          Length = 508

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 47/52 (90%), Positives = 49/52 (94%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFDESNSDNF 52
           MA LYSWSCKRSYK+G+VWHDLSEDDLILPAHGNEYVLKGSELF ESNSD F
Sbjct: 78  MADLYSWSCKRSYKNGYVWHDLSEDDLILPAHGNEYVLKGSELFCESNSDRF 129


>Medtr4g057330.1 | auxin-regulated protein | HC |
           chr4:20983812-20980996 | 20130731
          Length = 514

 Score =  102 bits (254), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/52 (90%), Positives = 48/52 (92%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFDESNSDNF 52
           MASLYSWS KRSYK+GFVWHDL EDDLI PAHGNEYVLKGSELFDESNSD F
Sbjct: 77  MASLYSWSSKRSYKNGFVWHDLCEDDLIQPAHGNEYVLKGSELFDESNSDRF 128


>Medtr4g063130.1 | auxin-regulated protein | HC |
           chr4:23360644-23365038 | 20130731
          Length = 422

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/49 (57%), Positives = 38/49 (77%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFDESNS 49
           M ++YSWS KRSYK+GFVWHDL+E D I P  G++Y+LKGSE+ +   +
Sbjct: 80  MPTMYSWSSKRSYKNGFVWHDLTESDFIYPTQGHDYILKGSEILEHETT 128


>Medtr4g063130.2 | auxin-regulated protein | HC |
           chr4:23360647-23365038 | 20130731
          Length = 421

 Score = 72.4 bits (176), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/49 (57%), Positives = 38/49 (77%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFDESNS 49
           M ++YSWS KRSYK+GFVWHDL+E D I P  G++Y+LKGSE+ +   +
Sbjct: 80  MPTMYSWSSKRSYKNGFVWHDLTESDFIYPTQGHDYILKGSEILEHETT 128


>Medtr1g115370.1 | DUF966 domain protein | HC |
           chr1:52069779-52068406 | 20130731
          Length = 254

 Score = 68.9 bits (167), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/49 (61%), Positives = 41/49 (83%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSELFDESNS 49
           +A++YSWS KRSY++GFVW DLSE+DLI P+  +EYVLKG+ L +E +S
Sbjct: 60  IANMYSWSTKRSYRNGFVWQDLSENDLIYPSSSHEYVLKGTLLIEEPSS 108


>Medtr8g091300.1 | DUF966 domain protein | HC |
           chr8:38095364-38096989 | 20130731
          Length = 409

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 2/53 (3%)

Query: 1   MASLYSWSCKRSYKSGFVWHDLSEDDLILPAHGN-EYVLKGSELFDESNSDNF 52
           M S YSWS KR+YKSG+VWHDL+  D+I P+ G  EYVLKGSEL  E  S+ F
Sbjct: 77  MPSQYSWSTKRNYKSGYVWHDLALKDIIHPSEGGAEYVLKGSELV-EGCSERF 128


>Medtr2g062310.1 | DUF966 domain protein | HC |
          chr2:26306172-26303022 | 20130731
          Length = 427

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 31/39 (79%)

Query: 5  YSWSCKRSYKSGFVWHDLSEDDLILPAHGNEYVLKGSEL 43
          ++WS KR YKSG+VW DL +DDLI P   NEYVLKGS++
Sbjct: 61 FAWSYKRRYKSGYVWQDLMDDDLITPISDNEYVLKGSQI 99