Miyakogusa Predicted Gene
- Lj1g3v5021180.4
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v5021180.4 Non Characterized Hit- tr|I1MIA2|I1MIA2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,39.68,6e-19,seg,NULL; Nucleic acid-binding proteins,Nucleic
acid-binding, OB-fold-like; Rep_fac-A_C,Replication ,CUFF.33869.4
(260 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g014890.1 | DUF223 domain protein | LC | chr4:4267608-4264... 118 6e-27
Medtr5g004860.1 | replication factor-A carboxy-terminal domain p... 113 2e-25
Medtr5g041170.1 | replication factor-A carboxy-terminal domain p... 112 3e-25
Medtr3g055660.1 | plant OB fold protein | LC | chr3:21910372-219... 111 7e-25
Medtr6g464080.1 | replication factor-A carboxy-terminal domain p... 110 2e-24
Medtr8g076570.1 | FHA domain protein | HC | chr8:32446773-324395... 107 9e-24
Medtr4g085760.1 | replication factor-A carboxy-terminal domain p... 106 2e-23
Medtr6g059860.1 | replication factor-A carboxy-terminal domain p... 101 8e-22
Medtr2g450060.1 | replication factor-A carboxy-terminal domain p... 98 9e-21
Medtr5g053590.1 | DUF223 domain protein | LC | chr5:22080013-220... 91 1e-18
Medtr0003s0290.1 | plant OB fold protein, putative | LC | scaffo... 87 1e-17
Medtr7g450880.1 | plant OB fold protein, putative | LC | chr7:17... 80 2e-15
Medtr1g062890.1 | replication factor-A carboxy-terminal domain p... 78 9e-15
Medtr2g060880.1 | DUF223 domain protein | LC | chr2:25828278-258... 73 3e-13
Medtr1g043690.1 | tyrosine kinase | LC | chr1:16391328-16395911 ... 71 8e-13
Medtr7g110100.1 | replication factor-A carboxy-terminal domain p... 69 6e-12
Medtr4g032565.1 | replication factor-A carboxy-terminal domain p... 66 3e-11
Medtr4g032585.1 | replication factor-A carboxy-terminal domain p... 66 4e-11
Medtr6g445520.1 | replication factor-A carboxy-terminal domain p... 65 5e-11
Medtr8g062030.1 | replication factor-A carboxy-terminal domain p... 65 9e-11
Medtr1g105785.1 | replication factor-A carboxy-terminal domain p... 64 1e-10
Medtr2g048560.1 | replication factor-A carboxy-terminal domain p... 64 2e-10
Medtr6g055250.1 | DUF223 domain protein | LC | chr6:19764237-197... 62 7e-10
Medtr5g078250.1 | replication factor-A carboxy-terminal domain p... 61 1e-09
Medtr3g056270.1 | replication factor-A carboxy-terminal domain p... 59 4e-09
Medtr7g051400.1 | replication factor-A carboxy-terminal domain p... 59 4e-09
Medtr4g036240.2 | replication factor-A carboxy-terminal domain p... 59 5e-09
Medtr4g036240.1 | replication factor-A carboxy-terminal domain p... 59 5e-09
Medtr4g036240.3 | replication factor-A carboxy-terminal domain p... 59 6e-09
Medtr8g469790.1 | retropepsins domain protein, putative | LC | c... 59 7e-09
Medtr1g075850.1 | replication factor-A carboxy-terminal domain p... 55 6e-08
Medtr3g082920.1 | tyrosine kinase family protein | HC | chr3:374... 55 1e-07
Medtr4g070090.1 | replication factor-A-like protein | HC | chr4:... 53 2e-07
Medtr5g027390.1 | replication factor-A-like protein | LC | chr5:... 53 3e-07
Medtr4g040040.1 | replication factor-A carboxy-terminal domain p... 51 1e-06
Medtr8g039210.1 | replication factor-A carboxy-terminal domain p... 50 2e-06
>Medtr4g014890.1 | DUF223 domain protein | LC | chr4:4267608-4264883
| 20130731
Length = 519
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 125/261 (47%), Gaps = 27/261 (10%)
Query: 1 MSQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGN-GWSYEACFK 59
+SQ + SQ T + + +LS++N V E VT+A+I K+ GW Y+ C
Sbjct: 282 LSQLTQGSQITQQGDIMNKAHFLTLSEVNHVMHETICVTIAEIKKINANKYGWIYDGCNF 341
Query: 60 CNRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAID 119
C + + C + N E PRFRVEV Y N+ +KF+LWD + ++ +A +
Sbjct: 342 CTKGVRMDNGQLKC-RGNHINDEAKPRFRVEVEAVYKNDKAKFLLWDNDVASIIGMSAQE 400
Query: 120 LKKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKL 179
LK+QL++ G+F P +D ++ FK+K PG +SV +SDNE ++++ +
Sbjct: 401 LKEQLVEIGQFHPTAYPPILDQVVCPQKVFKIKACPGSSPYSVIQISDNEGLLKNLEKQF 460
Query: 180 QVDEDSLMSKKGKSISSFLKEDDAYEIQSLXXXXXXXXXXIGHCTPAKRLSKDTLDDDFA 239
+ E SL + S SS P KR S++ +D +
Sbjct: 461 GLGEQSLCDETDPSCSS-------------------------ATPPPKRNSQEDVDWVGS 495
Query: 240 CQDLPSVQLSSSKVTKHIKTE 260
QD+ + QLSS+K+ K K E
Sbjct: 496 TQDVEATQLSSTKLAKQPKLE 516
>Medtr5g004860.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:159787-157165 | 20130731
Length = 540
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Query: 2 SQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKV-CVGNGWSYEACFKC 60
+Q S SQF +++ + N ++ L+ + ++Q+ Y VTVA+++KV GW Y ACFKC
Sbjct: 255 TQSQSSSQFITDDDLLSNPLIMPLADILQLQEISYCVTVAEVEKVNSTKFGWYYFACFKC 314
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDL 120
+ A + P+TC TE V R+++++ VSY N FV+WDRE QL+ +A L
Sbjct: 315 GKIAKGDNPPYTCESGHNTETEIV-RYKLDLNVSYENTKGTFVMWDREATQLLGISAAQL 373
Query: 121 KKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKL 179
+ ++ G + + P +D I K + FKVK QP +K SV D + + ++ K
Sbjct: 374 RTNMIQAGITNRLEYPMLLDGIGEKTYVFKVKWQPKWKTTSVVCYRDADALVNLVKAKF 432
>Medtr5g041170.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:18079249-18077033 | 20130731
Length = 445
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Query: 2 SQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKV-CVGNGWSYEACFKC 60
+Q S SQF +++ + N ++ L+ + ++Q+ Y VTVA+++KV GW Y ACFKC
Sbjct: 162 TQSQSSSQFITDDDLLSNPLIMPLADILQLQEISYCVTVAEVEKVNSTKFGWYYFACFKC 221
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDL 120
+ A + P+TC TE V R+++++ VSY N FV+WDRE QL+ +A L
Sbjct: 222 GKIAKGDNPPYTCESGHNTETEIV-RYKLDLNVSYENTKGTFVMWDREATQLLGISAAQL 280
Query: 121 KKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKL 179
+ ++ G + + P +D I K + FKVK QP +K SV D + + ++ K
Sbjct: 281 RTNMIQAGITNRLDYPMLLDGIGEKTYVFKVKWQPKWKTTSVVCYRDADALVNLVKAKF 339
>Medtr3g055660.1 | plant OB fold protein | LC |
chr3:21910372-21907746 | 20130731
Length = 548
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 14/269 (5%)
Query: 1 MSQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGN-GWSYEACFK 59
+SQ + SQ T + + +LS++N V E VT+A+I K+ GW Y+ C
Sbjct: 282 LSQLTQGSQITQQGDIMNKAHFLTLSEVNHVMHETICVTIAEIKKINANKYGWIYDGCNF 341
Query: 60 CNRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAID 119
C + + C + N E PRFRVEV Y N+ +KF+LWD + ++ +A +
Sbjct: 342 CTKGVRMDNGQLKC-RGNHINDEAKPRFRVEVEAVYKNDKAKFLLWDNDVASIIGMSAQE 400
Query: 120 LKKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKL 179
LK+QL++ G+F P +D ++ FK+K P +SV +SDNE ++++ +
Sbjct: 401 LKEQLVEIGQFHPTAYPPILDQVVCPQKVFKIKACPESSPYSVIQISDNEGLLKNLEKQF 460
Query: 180 QVDEDSLMSKKGKSISSFLKEDDAYEIQSLXXXXXXXXXXIGHCTPA--------KRLSK 231
+ E S ++ +K D+ E Q L P+ KR S+
Sbjct: 461 GLGEAS----SKLALLDEVKVDEVKESQELVVDTLNTQSLCDETDPSCSSATPPPKRNSQ 516
Query: 232 DTLDDDFACQDLPSVQLSSSKVTKHIKTE 260
+ +D + QD+ + QLSS+K+ K K E
Sbjct: 517 EDVDWVGSTQDVEATQLSSTKLAKQPKLE 545
>Medtr6g464080.1 | replication factor-A carboxy-terminal domain
protein | LC | chr6:22311880-22315905 | 20130731
Length = 555
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
Query: 5 SSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGN-GWSYEACFKCNRK 63
SS SQ + ++F V+ + + + + +TV K +K GW YE+C KC R
Sbjct: 256 SSSSQRSQNDEFSNLSQVRPIGEFRNFMQTTFCITVGKTNKFNPNQFGWYYESCPKCPRS 315
Query: 64 ADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQ 123
+ ++ + C CG+ R+RV V V Y + + FV WD+E +Q++ TA L+K
Sbjct: 316 SRLNNGSYKC-GCGEDVEVPFTRYRVIVQVVYEGDKADFVFWDKEVVQILGVTADTLRKT 374
Query: 124 LLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKLQVDE 183
+ + GE D M+ P+ +D +LG A +VK QP Y+Q SV G + + I+ I+ LQ +E
Sbjct: 375 MQEVGEDDPMIYPKHLDNLLGLELALRVKYQPYYQQSSVQGFTSDPAVIQRIKRHLQPNE 434
Query: 184 DS 185
S
Sbjct: 435 QS 436
>Medtr8g076570.1 | FHA domain protein | HC | chr8:32446773-32439587
| 20130731
Length = 810
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 2/182 (1%)
Query: 3 QFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGN-GWSYEACFKCN 61
Q SS SQ + ++F VKS+++ + K+ Y +TVAK K GW YE C KC
Sbjct: 254 QVSSSSQRVNYDEFSNLSGVKSIAEFRDFDKDTYCITVAKSLKFNPNRYGWYYETCTKCT 313
Query: 62 RKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLK 121
+ + + C CG++ + R++V V++ Y ++ ++F+ WD+EC Q++ A L+
Sbjct: 314 KASRSGGASYKC-SCGEEVEVPLTRYKVVVIMEYRDHKAEFLFWDKECFQILGVAADTLR 372
Query: 122 KQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKLQV 181
K + GE D + PE +D +L FA +VK Q Y Q SV S +E I++I+ +L
Sbjct: 373 KTMQQVGEDDPHIYPEVLDKLLKIEFALRVKYQLYYHQASVNVFSRDEIVIKNIKARLHP 432
Query: 182 DE 183
DE
Sbjct: 433 DE 434
>Medtr4g085760.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:33538359-33540924 | 20130731
Length = 545
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 2 SQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKV-CVGNGWSYEACFKC 60
SQ+S SQF+ + N SL++++ + +E VTVA+I K+ +GW+Y+ C +C
Sbjct: 263 SQYSQASQFSQNTDIMSNAKFLSLAEISNISQELSCVTVAEIIKLNATRHGWTYDGCNQC 322
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDL 120
R + C KN E +PR++VEV + +F+ WD ++K +A +L
Sbjct: 323 TRSVKLEGDKWMC-YHKHKNDEPLPRYKVEVTAVHKEEKIRFIFWDDLSASILKISAAEL 381
Query: 121 KKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESI----- 175
+K+++ G + P+ +D +L K FK+K PG SV VSD+E + ++
Sbjct: 382 RKKMVRAGHTNPRTYPKTLDKLLQKKKVFKIKALPGGNPCSVLQVSDSEPLLANLEKQFG 441
Query: 176 -------RDKLQVDEDSLMSKKGKSIS-SFL----KEDDAYEIQSLXXXXXXXXXXIGHC 223
++ L ++ + + +S+S FL K+ ++SL
Sbjct: 442 LVEASSSKEPLGLEMADIGTSSKQSVSLGFLELSSKDTSMVAVESLCGENDLSVT--SST 499
Query: 224 TPAKRLSKDTLDDDF--ACQDLPSVQLSSSKVTK 255
PAKRLS D D + A QD+ Q S++KVTK
Sbjct: 500 PPAKRLSMDDTDSEVVPATQDVQPTQRSTTKVTK 533
>Medtr6g059860.1 | replication factor-A carboxy-terminal domain
protein | LC | chr6:20543712-20541106 | 20130731
Length = 539
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 127/269 (47%), Gaps = 17/269 (6%)
Query: 1 MSQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGN-GWSYEACFK 59
+SQ + SQ T + + +LS++N V E VT+A+I K+ GW Y+ C
Sbjct: 276 LSQLTQGSQMTQQGDIMNKAHFLTLSEVNHVMHETICVTIAEIKKINANKYGWIYDGCNF 335
Query: 60 CNRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAID 119
C + + C + N E PRFRVEV Y N+ +KF+LW+ + ++ +A +
Sbjct: 336 CTKGVRMDNGQLKC-RGNHINDEAKPRFRVEVEAVYKNDKAKFLLWENDVASIMGMSAQE 394
Query: 120 LKKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKL 179
LK+QL+ EF P +D ++ FK+K G +SV +SDNE ++++ +
Sbjct: 395 LKEQLV---EFHPTTYPPILDQVVCPQKVFKIKACLGSSPYSVIQISDNEGLLKNLEKQF 451
Query: 180 QVDEDSLMSKKGKSISSFLKEDDAYEIQSLXXXXXXXXX---XIGH-----CTPAKRLSK 231
+ E S ++ +K D+ E Q L H P KR S+
Sbjct: 452 GLGEVS----SKLALLDEVKFDEVKESQELVVDTLNTQSLCDETDHSCSSATPPPKRNSQ 507
Query: 232 DTLDDDFACQDLPSVQLSSSKVTKHIKTE 260
+ +D + QD+ + QLSS+K+ K K E
Sbjct: 508 EDVDWVGSTQDVEATQLSSTKLAKQPKLE 536
>Medtr2g450060.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:22081675-22078797 | 20130731
Length = 570
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 2 SQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVG-NGWSYEACFKC 60
+Q + SQ +++ + + V LSQ+ ++ + Y VTVA I KV NGW Y AC KC
Sbjct: 259 TQSYTGSQVATQDDLLSKNTVLPLSQVIQLDQITYCVTVATIQKVNSNKNGWYYFACHKC 318
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDL 120
+ A P+TC E V R+++E+ VSY ++ FV+WDRE Q++ +A L
Sbjct: 319 PKIAKGDKPPYTCEDGHNTEIEIV-RYKLEMDVSYESDRCNFVVWDREVTQMLGISAAQL 377
Query: 121 KKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKLQ 180
+ ++ G + + P +D + K F FKVK QP +K SV E ++ + K
Sbjct: 378 RSNMIQAGITNRLEYPMLLDRLAEKNFVFKVKWQPRWKSCSVVCYKGGEAFVDQVVAKFP 437
Query: 181 V 181
+
Sbjct: 438 I 438
>Medtr5g053590.1 | DUF223 domain protein | LC |
chr5:22080013-22077419 | 20130731
Length = 524
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 128/259 (49%), Gaps = 23/259 (8%)
Query: 14 EKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVG-NGWSYEACFKCNRKADCSSLPFT 72
E+F+ + +V L ++ ++ + VTV KI++V NGW Y+AC KCNR A +LP
Sbjct: 274 ERFIGSAVVLPLKEIMQLTETTVCVTVVKINQVKPSKNGWYYKACTKCNRVAKGDTLPLL 333
Query: 73 CPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQLLDEG---- 128
C + + N + RF++EV V YN ++KF LWDREC +L+ TA DL++ + + G
Sbjct: 334 CDQKHETNAINL-RFKLEVEVEYNEVATKFFLWDRECNELLGTTAADLQRVMAEAGVTNP 392
Query: 129 -EFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSD-----NEKTIESIRDKLQVD 182
E+ + + KL ++ +KQ D N +T E + +L
Sbjct: 393 LEYQHTWTNWKTESLFVKLNGSQLGTAVRFKQSRKMKKDDFLPVENVQTAEVLYSQL--- 449
Query: 183 EDSLMSKKGKSISSFLKEDDAYEIQSLXXXXXXXXXXIGHCTPAKRLSKD-TLDDDFACQ 241
D+ + +++S+F Q+ TP KR++ +++DF
Sbjct: 450 PDTTTISQLQTLSTF-------PTQTPTALCDTEPESQSSLTPGKRVADPLPINNDFESP 502
Query: 242 DLPSVQLSSSKVTKHIKTE 260
D+ S + SS+K+ ++IKTE
Sbjct: 503 DMCSTKQSSTKIRRNIKTE 521
>Medtr0003s0290.1 | plant OB fold protein, putative | LC |
scaffold0003:135726-133156 | 20130731
Length = 479
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 20/179 (11%)
Query: 2 SQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKV-CVGNGWSYEACFKC 60
+Q S S F +E++ + N+++ SLS++ ++ + Y VT +++KV GW Y C KC
Sbjct: 223 TQTFSGSHFNTEDEILANNLIMSLSEIIQLDQITYCVTTVRVEKVNSTIFGWYYLVCCKC 282
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDL 120
+ A P+TC TE V R+++E+ VSY S FV+WDRE
Sbjct: 283 PKVAKGEKPPYTCDSGHNTETEIV-RYKLELDVSYEGTKSTFVMWDREA----------- 330
Query: 121 KKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKL 179
G + + P ID I K FKVK QP +K SV + + E I+ K
Sbjct: 331 -------GITNRLEYPMLIDSIGQKSMVFKVKWQPRWKTSSVVSFKEGDAICELIKSKF 382
>Medtr7g450880.1 | plant OB fold protein, putative | LC |
chr7:17012233-17013813 | 20130731
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 2 SQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKV-CVGNGWSYEACFKC 60
+Q S SQF E++ + N+++ L ++ ++ + Y VTV +++KV GW Y C KC
Sbjct: 159 TQTFSGSQFNIEDEILANNLIMPLYEIIQLDQITYCVTVVRVEKVNSTSFGWYYLVCCKC 218
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDL 120
+ A P+TC TE V R+++E+ VSY S FV+WDRE QL+ +A
Sbjct: 219 PKVAKGEKPPYTCESGHNIETEIV-RYKLELDVSYEGTKSTFVMWDREVSQLLGISAAQF 277
Query: 121 KKQLLDEGEFDAMVVP 136
+ +++ G + + P
Sbjct: 278 RLNMIEAGITNRLEYP 293
>Medtr1g062890.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:27585225-27589548 | 20130731
Length = 391
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 2 SQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKV-CVGNGWSYEACFKC 60
SQFS SQ ++ + SLS++N++ E VTVA+I K GW+Y+ C +C
Sbjct: 203 SQFSQGSQLSTPTDIMSKATFLSLSEINDITNEIICVTVAEITKQNATRYGWTYDGCKEC 262
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDL 120
+ C K N + VPR++VEV V + + ++F+ WD + ++ +A DL
Sbjct: 263 TKVVKMDDGQLKC-KNAHVNQKPVPRYKVEVQVEHKGSKARFLFWDELTVSILGISATDL 321
Query: 121 KKQLLDEGEFDAMVVP-EPIDCILGKLFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKL 179
++Q++ G + P + K FKVK PG S+ S++E+ + ++ +
Sbjct: 322 REQMIQAGHTNPKTYPKLLDKLVFKKKKVFKVKAHPGSNPCSIIQFSESEQLLGNLEKQF 381
Query: 180 QVDEDSLMS 188
++E MS
Sbjct: 382 GLEEVIRMS 390
>Medtr2g060880.1 | DUF223 domain protein | LC |
chr2:25828278-25824974 | 20130731
Length = 515
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%)
Query: 86 RFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQLLDEGEFDAMVVPEPIDCILGK 145
R++V V++ ++++ ++FV WD+EC Q++ A L+K + GE + PE +D +L
Sbjct: 353 RYKVVVIMVHDDHKAEFVFWDKECFQILGVAADALRKSMQHVGEDYPHIYPEVLDKLLEI 412
Query: 146 LFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKLQVDE 183
FA +VK QP Y Q SV S +E I+ I+ L DE
Sbjct: 413 EFALRVKYQPYYHQASVNAFSRDETVIKKIKAHLHPDE 450
>Medtr1g043690.1 | tyrosine kinase | LC | chr1:16391328-16395911 |
20130731
Length = 637
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 2 SQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKV-CVGNGWSYEACFKC 60
+Q S+ SQF++++ + N ++ LS + ++++ YVVTVAKI+KV GW Y AC KC
Sbjct: 258 TQSSAGSQFSTDDDLLSNPLIMPLSDILQLEQISYVVTVAKIEKVNSTKFGWYYLACDKC 317
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRF-----RVEVMVSYNNNSSKFVLWDRECIQLVKQ 115
+ A P+TC +K T F R+ + N S + +
Sbjct: 318 GKIAKGDKPPYTC----EKGTNLRWMFCMEIQRLHLFFGIVNPHSYWGV----------- 362
Query: 116 TAIDLKKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSV 162
+A L+ ++ G + + P +D I GK AFK+K QP K SV
Sbjct: 363 SAAQLRINMIQAGITNRLEYPMLMDSIGGKTMAFKIKWQPKCKTISV 409
>Medtr7g110100.1 | replication factor-A carboxy-terminal domain
protein | HC | chr7:45127464-45130150 | 20130731
Length = 526
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Query: 1 MSQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKC 60
+SQ + E +Q+ ++ ++ L E +C V+ +A I + W Y+AC KC
Sbjct: 254 VSQITGSLIVPLAEDMLQSRMM-TIEDLIESSDQCVVIVLASIIGIEAEYSWYYDACTKC 312
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDL 120
+ + CP+C ++ VPRF++ V V N S+ F+L+DR V ++ DL
Sbjct: 313 AGRIKIIAGRMFCPRC-NQSRNAVPRFKLHVQVMDNTGSTSFILFDRNVSNYVGKSVQDL 371
Query: 121 KKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPG-----YKQFSVTGVSDNEKTIESI 175
+G D P +D ++GK FKV++ G ++ + V +D+ I
Sbjct: 372 IDS-QGQGNNDKG-YPSDLDVLVGKKMLFKVEITDGNLHLSWRNYGVKRTTDDPDLISQF 429
Query: 176 RD----KLQVDED 184
K+ +D+D
Sbjct: 430 SKRHNLKITIDDD 442
>Medtr4g032565.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:11217564-11219039 | 20130731
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 51 GWSYEACFKCNRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECI 110
GW Y+AC KC + + CP+C K++ VPRF++ V V S+ F+L+DR
Sbjct: 47 GWYYDACTKCAGRITIVAGRMFCPRC-KQSRNAVPRFKLHVQVMDTTGSTSFILFDRNVS 105
Query: 111 QLVKQTAIDLKKQLLDEGEFD-AMVVPEPIDCILGKLFAFKVKVQPG-----YKQFSVTG 164
V ++ DL + +G+ D ++ P ++ ++GK FKV + G ++ + V
Sbjct: 106 NYVGRSVQDL---IDAQGQGDNSLGYPADLEVLVGKKMLFKVDITNGNLLHNWRNYGVKR 162
Query: 165 VSDNEKTIE 173
SD+ + I+
Sbjct: 163 TSDDAELIQ 171
>Medtr4g032585.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:11228071-11229546 | 20130731
Length = 286
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 51 GWSYEACFKCNRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECI 110
GW Y+AC KC + + CP+C K++ VPRF++ V V S+ F+L+DR
Sbjct: 47 GWYYDACTKCAGRITIVAGRMFCPRC-KQSRNVVPRFKLHVQVMDTTGSTSFILFDRNVS 105
Query: 111 QLVKQTAIDLKKQLLDEGEFD-AMVVPEPIDCILGKLFAFKVKVQPG-----YKQFSVTG 164
V ++ DL + +G+ D ++ P ++ ++GK FKV + G ++ + V
Sbjct: 106 NYVGRSVQDL---IDAQGQGDNSLGYPADLEVLVGKKMLFKVDITNGNLLHNWRNYGVKR 162
Query: 165 VSDNEKTIE 173
SD+ + I+
Sbjct: 163 TSDDAELIQ 171
>Medtr6g445520.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:15886770-15884303 | 20130731
Length = 428
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 8 SQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKCNRKADCS 67
S+ T E+ F++ K++ L E E V A + V + W Y AC CN+K
Sbjct: 126 SRITEEDDFLKITPRKTVEDLKECAMESCFVVKATVKFVIDTDEWWYTACV-CNKKVVPD 184
Query: 68 SLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQLLDE 127
F C KC K PR+ ++V V +S+ FV++DR+ L+K+TA D+ + +
Sbjct: 185 EKMFFCAKCNKHVIHVCPRYMIKVRVIDETDSATFVIFDRDATLLLKKTAADVIESM--- 241
Query: 128 GEFDAMVVPEPIDCILGKLFAFKVK 152
G ++ +P+ I ++ F FKV+
Sbjct: 242 GSDESGTLPKEISSLVESTFLFKVE 266
>Medtr8g062030.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:25901653-25904109 | 20130731
Length = 575
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 1 MSQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKC 60
++ S+ + EE+F++ K++SQL +++ + V A + G W Y AC KC
Sbjct: 253 LTVLGGPSKPSMEEEFLRMYPKKTISQLFNSEEDGFFVVSAIVSGFVEGEEWWYPAC-KC 311
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLV-KQTAID 119
+R S + C C K + VPR+++++ V S FVL+D + L+ KQ ++
Sbjct: 312 HRSVTADSGAYYCKGCDKHVIQMVPRYKIKLRVDDGTGDSVFVLFDSDVHYLLEKQCSVL 371
Query: 120 LKKQLLDEGEFDAMVVPEPIDCILGKLFAFKV 151
+ K D+ F P I + GK F FKV
Sbjct: 372 VAKSKGDDVGF----YPPEIVMLKGKRFLFKV 399
>Medtr1g105785.1 | replication factor-A carboxy-terminal domain
protein | HC | chr1:47732917-47735741 | 20130731
Length = 566
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 24 SLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKCNRKADCSSLPFTCPKCGKKNTET 83
++ L E ++C + +A I + W Y+AC KC + + C KC
Sbjct: 276 TIEDLIEATEQCQGIVLATICGIESEYSWYYQACTKCAGRVRTVAGRLYCGKC-NTGRNA 334
Query: 84 VPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQLLDEGEFDAMVVPEPIDCIL 143
VPRF++ V V N S+ F+L+DR V +T D ++D ++ P +D +
Sbjct: 335 VPRFKLHVQVMDNTGSTSFILFDRNVSSYVNRTVQD----MIDAQPNNSSDYPSDLDSFV 390
Query: 144 GKLFAFKVKVQPG-----YKQFSVTGVSDNEKTI 172
GK FKV+V G ++ ++V + E I
Sbjct: 391 GKRMLFKVEVSDGNLLHNWRNYAVKRTTAEEDVI 424
>Medtr2g048560.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21416239-21412307 | 20130731
Length = 549
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 1 MSQFSSCSQFTSEEKFVQNDIVKSLSQLNE-VQKECYVVTVAKIDKVCVGNGWSYEACFK 59
+S+ + S+ + EE F+ + ++ L + +++C+ V ++ + + W Y +C
Sbjct: 253 ISKITEASKVSVEEDFLNLSPMTTVEGLKDCAEEKCFAV-FGTVNVIVDDSDWWYTSCVV 311
Query: 60 CNRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAID 119
CN+K + C KC K PR+ +++ V + +S+ FVL+DR+ +L K+T D
Sbjct: 312 CNKKVYPDEKMYFCSKCNKHVLNVTPRYMIKMRVVDHTDSATFVLFDRDAAELFKKTCAD 371
Query: 120 LKKQLLDEGEFDAMVVPEPIDCILGKLFAFKVKVQPG 156
+ + DA VP+ I ++ K + FKV+ G
Sbjct: 372 MIESC--GMGTDASEVPKDILAMVEKSYLFKVETNLG 406
>Medtr6g055250.1 | DUF223 domain protein | LC |
chr6:19764237-19766650 | 20130731
Length = 398
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 2 SQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKV-CVGNGWSYEACFKC 60
+Q S+ SQF++++ + N ++ LS + ++++ YVVTVAKI+KV GW Y AC+KC
Sbjct: 215 TQSSAGSQFSTDDDLLSNPLIMPLSDILQLEQISYVVTVAKIEKVNSTKFGWYYLACYKC 274
Query: 61 NRKADCSSLPFTCPKCGKKNTETV 84
+ A + P+T K TE V
Sbjct: 275 GKIAKGDNPPYTFEKGHNTETEIV 298
>Medtr5g078250.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:33436158-33438920 | 20130731
Length = 517
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 8 SQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKCNRKADCS 67
S+ + EE F++ K+L QL+ ++ V A I + W Y AC KC+R
Sbjct: 259 SKVSLEEDFLRTFPKKTLEQLHSTFEDGVFVVYATIGGLVDHEDWWYPAC-KCHRSVSAD 317
Query: 68 SLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQLLDE 127
S F C C K + VPRFRV+V VS N FV++D + L+ L E
Sbjct: 318 SGAFYCKGCAKHVFQMVPRFRVKVNVSDATNVGVFVVFDGDMQNLLNTPCSSLVSVAKAE 377
Query: 128 GEFDAMVVPEPIDCILGKLFAFKVK 152
+A P + + GK FKV+
Sbjct: 378 ---NAGHYPPEFEKLKGKKMLFKVE 399
>Medtr3g056270.1 | replication factor-A carboxy-terminal domain
protein | HC | chr3:22409504-22413525 | 20130731
Length = 719
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 14 EKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKCNRKADCSSLPFTC 73
+ F+ N ++ L + Q+E V + + ++ W Y AC CN+ + C
Sbjct: 424 QDFLFNTPRTTIQGLKDSQQEGMYVVLGTVKQIVNPENWYYTACM-CNKSVYPAEGMHFC 482
Query: 74 PKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAID-LKKQLLDEGEFDA 132
KC + + PR+ ++V V +++ + FVL+DR+ L ++ D L+ DEG
Sbjct: 483 EKCNRHVVKVFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADILETHRADEG---- 538
Query: 133 MVVPEPIDCILGKLFAFKVK----VQPGYKQ-FSVTGVSDNEKTIESIRDKLQVDEDSLM 187
V+P I ++ + FKV+ + P ++Q F V V + I + K +E + +
Sbjct: 539 -VLPTEIGALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQFKAKWAKEEATFI 597
Query: 188 --SKKGKSISSFL 198
+ + S+SS L
Sbjct: 598 KNTNEMGSLSSLL 610
>Medtr7g051400.1 | replication factor-A carboxy-terminal domain
protein | LC | chr7:18001910-18004476 | 20130731
Length = 542
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 24 SLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKCNRKADCSSLPFTCPKCGKKNTET 83
++ L E ++C + +A I + W Y+AC KC + + C KC
Sbjct: 254 TIEDLIEATEQCQGIVLATICGIESEYSWYYQACTKCVGRVRTVASRLYCGKCN-TGRNA 312
Query: 84 VPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQLLDEGEFDAMVVPEPIDCIL 143
V RF++ V V N S+ F+L+DR + V T D ++D ++ P +D +
Sbjct: 313 VARFKLHVQVIDNTGSTSFILFDRNVSKYVNGTIQD----MIDAQPNNSSDYPSDLDSFV 368
Query: 144 GKLFAFKVKVQPG 156
GK FKV+V G
Sbjct: 369 GKQMLFKVEVSDG 381
>Medtr4g036240.2 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830210-11833873 | 20130731
Length = 480
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 14 EKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKCNRKADCSSLPFTC 73
+ F+ N ++ L + Q+E V + + ++ W Y AC CN+ + C
Sbjct: 185 QDFLFNTPRTTIQGLKDSQQEGMYVVLGTVKQIVNPENWYYTACM-CNKSVYPAEGMHFC 243
Query: 74 PKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAID-LKKQLLDEGEFDA 132
KC + + PR+ ++V V +++ + FVL+DR+ L ++ D L+ DEG
Sbjct: 244 EKCNRHVVKVFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADILETHRADEG---- 299
Query: 133 MVVPEPIDCILGKLFAFKVK----VQPGYKQ-FSVTGVSDNEKTIESIRDKLQVDEDSLM 187
V+P I ++ + FKV+ + P ++Q F V V + I + K +E + +
Sbjct: 300 -VLPTEIAALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQFKAKWAKEEATFI 358
Query: 188 --SKKGKSISSFL 198
+ + S+SS L
Sbjct: 359 KNTNEMGSLSSLL 371
>Medtr4g036240.1 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830642-11833873 | 20130731
Length = 560
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 14 EKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKCNRKADCSSLPFTC 73
+ F+ N ++ L + Q+E V + + ++ W Y AC CN+ + C
Sbjct: 265 QDFLFNTPRTTIQGLKDSQQEGMYVVLGTVKQIVNPENWYYTACM-CNKSVYPAEGMHFC 323
Query: 74 PKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAID-LKKQLLDEGEFDA 132
KC + + PR+ ++V V +++ + FVL+DR+ L ++ D L+ DEG
Sbjct: 324 EKCNRHVVKVFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADILETHRADEG---- 379
Query: 133 MVVPEPIDCILGKLFAFKVK----VQPGYKQ-FSVTGVSDNEKTIESIRDKLQVDEDSLM 187
V+P I ++ + FKV+ + P ++Q F V V + I + K +E + +
Sbjct: 380 -VLPTEIAALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQFKAKWAKEEATFI 438
Query: 188 --SKKGKSISSFL 198
+ + S+SS L
Sbjct: 439 KNTNEMGSLSSLL 451
>Medtr4g036240.3 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830210-11833873 | 20130731
Length = 417
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 14 EKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKCNRKADCSSLPFTC 73
+ F+ N ++ L + Q+E V + + ++ W Y AC CN+ + C
Sbjct: 122 QDFLFNTPRTTIQGLKDSQQEGMYVVLGTVKQIVNPENWYYTACM-CNKSVYPAEGMHFC 180
Query: 74 PKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAID-LKKQLLDEGEFDA 132
KC + + PR+ ++V V +++ + FVL+DR+ L ++ D L+ DEG
Sbjct: 181 EKCNRHVVKVFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADILETHRADEG---- 236
Query: 133 MVVPEPIDCILGKLFAFKVK----VQPGYKQ-FSVTGVSDNEKTIESIRDKLQVDEDSLM 187
V+P I ++ + FKV+ + P ++Q F V V + I + K +E + +
Sbjct: 237 -VLPTEIAALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQFKAKWAKEEATFI 295
Query: 188 SKKGK--SISSFL 198
+ S+SS L
Sbjct: 296 KNTNEMGSLSSLL 308
>Medtr8g469790.1 | retropepsins domain protein, putative | LC |
chr8:25457465-25460928 | 20130731
Length = 542
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 SSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGN-GWSYEACFKCNRK 63
++ S+ + ++F V+ + + + + Y +T+ + K G YE+C KC R
Sbjct: 389 ATSSRRSQNDEFSNLAQVRHIGEFRDFIQNIYCITIGRTKKFNPNQFGCYYESCPKCPRS 448
Query: 64 ADCSSLPFTCPKCGKKNTETVPR---------FRVEVMVSYNNNSSKFVLWDRECIQLVK 114
+ + +CG + VP ++V V V Y + FV WD+EC+Q++
Sbjct: 449 WKSNGAGY---RCGCREDVEVPFTSLFISTFIYKVVVQVVYEGQKADFVFWDKECVQILG 505
Query: 115 QTAIDLKKQLLDEGEFDAMVVPEPIDCILGKLFAFKV 151
A L+K + + GE D ++ P+ +D +L A +
Sbjct: 506 VIADTLRKTMQEIGEDDPIIYPKHLDNLLNLQLALHM 542
>Medtr1g075850.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:33615520-33612872 | 20130731
Length = 528
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 1 MSQFSSCSQFTSEEKFVQNDIVKSLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKC 60
+ + S S+ + EE F++ K+L QL+ + V + I + W Y AC KC
Sbjct: 246 IPRIGSRSKVSLEEDFLRTYPKKTLEQLHSTFDDGVFVVYSTISGLVDHEDWWYPAC-KC 304
Query: 61 NRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKF 102
+R S F C C K + VPRFRV+V VS N+ +
Sbjct: 305 HRSVSADSGAFYCKGCAKHVFQMVPRFRVKVNVSDAENAGHY 346
>Medtr3g082920.1 | tyrosine kinase family protein | HC |
chr3:37427948-37423361 | 20130731
Length = 433
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 86 RFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQLLDEGEFDAMVVPEPIDCILGK 145
R++V V V + + S+FV D++C+Q++ T L+K + + + P +D +LG
Sbjct: 226 RYKVVVQVVCDGDKSEFVFGDKKCLQIIGITTQALRKIMQE-------IYPGHLDKMLGL 278
Query: 146 LFAFKVKVQPGYKQFSVTGVSDNEKTIESIRDKLQVDE 183
A +VK QP Y Q SV G S + I IR L E
Sbjct: 279 ELALRVKYQPYYHQSSVLGFSLDPAVIRRIRSHLHPRE 316
>Medtr4g070090.1 | replication factor-A-like protein | HC |
chr4:26377794-26380276 | 20130731
Length = 502
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 11 TSEEKFVQNDIVKSLSQLNEV------QKECYVVTVAKIDKVCVGNGWSYEACFKCNRKA 64
T+E + N VK++S+L + Q + VA +D + + NG Y +C C +
Sbjct: 279 TTETLSLTNVDVKTISELLSMAVSGVYQGDVVYNCVATVDDILLKNGLYYVSCPHCRKTV 338
Query: 65 DCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQL 124
+ F C C KK R+R+E+ V+ + S+ FVL+ QL + DL L
Sbjct: 339 SSTETDFNCEHCTKKVDYPKIRYRLELQVNDSTESTIFVLFAEVAEQLAQLKLDDLTPDL 398
Query: 125 LDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSV 162
++ D+ +P+ + I+G F+VK+ +++ V
Sbjct: 399 ENQTGRDSD-LPKQLQHIIGSKHIFQVKLSSYFERRGV 435
>Medtr5g027390.1 | replication factor-A-like protein | LC |
chr5:11382204-11385197 | 20130731
Length = 477
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 11 TSEEKFVQNDIVKSLSQLNEV------QKECYVVTVAKIDKVCVGNGWSYEACFKCNRKA 64
T+E + N VK++S+L + Q + VA +D + + NG Y +C C +
Sbjct: 247 TTETLSLTNVDVKTISELLSMAVSGVYQGDVVYNCVATVDDILLKNGLYYVSCPHCRKTV 306
Query: 65 DCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQL 124
+ F C C KK R+R+E+ V+ + S+ FVL+ QL + DL L
Sbjct: 307 SSTETDFNCEHCTKKVDYPKIRYRLELQVNDSTESTIFVLFAEVAEQLAQLKLDDLTPDL 366
Query: 125 LDEGEFDAMVVPEPIDCILGKLFAFKVKVQPGYKQFSV 162
++ D+ +P+ + I+G F+VK+ +++ V
Sbjct: 367 ENQTGRDSD-LPKQLQHIIGSKHIFQVKLSSYFERRGV 403
>Medtr4g040040.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:14260390-14261092 | 20130731
Length = 168
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 38 VTVAKIDKVCVGNGWSYEACFKCNRKADCSSLPFTCPKCGKKNTETVPRFRVEVMVSYNN 97
+ +A +D+ +GW + +C C+ + S + C +C K PRFR+ V+ N
Sbjct: 3 IIMATVDQYVTDDGWWFLSCI-CHEQVVPDSPAYYCERCNKHVLMITPRFRITFHVTDNT 61
Query: 98 NSSKFVLWDRECIQLVKQTAIDLKKQLLDEGEFDAM--VVPEPIDCILGKLFAFKV--KV 153
S+ F++ D + ++L+ GE M VP+ + ++GK + FKV KV
Sbjct: 62 GSATFLMHDSVAAEFFGIPC----SKMLEFGENVGMSSYVPDELLNMVGKCYLFKVFSKV 117
Query: 154 QP---GYKQFSVTGVSDNEKTI 172
G K + ++ ++D+E+ +
Sbjct: 118 GAGCDGEKCYPISKINDDEELL 139
>Medtr8g039210.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:14593466-14588967 | 20130731
Length = 678
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 22 VKSLSQLNEVQKECYVVTVAKIDKVCVGNGWSYEACFKCNRKADCSSLPFTCPKCGKKNT 81
VK++S+L + Y VA +D + + NG Y +C C + + F C C KK
Sbjct: 40 VKTISELLSMGDVVYNC-VATVDDILLKNGLYYISCPHCRKTVSSTETDFNCEYCTKKVD 98
Query: 82 ETVPRFRVEVMVSYNNNSSKFVLWDRECIQLVKQTAIDLKKQLLDEGEFDAMVVPEPIDC 141
R+R+E+ + + S+ FVL+ QL + DL L + G + P+ +
Sbjct: 99 YLKIRYRLELPFNDSTKSTIFVLFAEVAEQLAQLKLDDLTPDLENTGRDSNL--PKQLQH 156
Query: 142 ILGKLFAFKVKVQPGYKQFSV 162
I+G F+VK+ +++ +
Sbjct: 157 IIGSKHIFQVKLSSYFERRGI 177