Miyakogusa Predicted Gene

Lj1g3v5021050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5021050.1 tr|B9IPL1|B9IPL1_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_248529
PE=4,67.8,2e-16, ,CUFF.33848.1
         (86 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g116650.1 | tyrosine kinase family protein | HC | chr7:481...   103   4e-23

>Medtr7g116650.1 | tyrosine kinase family protein | HC |
           chr7:48165459-48168646 | 20130731
          Length = 544

 Score =  103 bits (257), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/63 (76%), Positives = 55/63 (87%)

Query: 1   MGKRPVSDFEDPRLGGQVDKEDFNAILQIAVLCVAKSSKGRPTIEIIFDELDKVYKDARA 60
           MGKRP+SDF D RL GQVDKEDF +ILQIAVLCVAKSS GRP IE++FDELDKVY+D  +
Sbjct: 464 MGKRPLSDFVDSRLKGQVDKEDFGSILQIAVLCVAKSSTGRPPIEVVFDELDKVYRDLDS 523

Query: 61  RKE 63
           RK+
Sbjct: 524 RKK 526