Miyakogusa Predicted Gene

Lj1g3v5000600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5000600.1 Non Characterized Hit- tr|A5ARC1|A5ARC1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,91.49,4e-16,seg,NULL; GB DEF: T27C4.14 PROTEIN,NULL; EXPORTIN
4,7-RELATED,NULL; no description,Armadillo-like he,CUFF.33816.1
         (550 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g115710.1 | exportin-4 protein, putative | HC | chr7:47861...   857   0.0  
Medtr7g115710.2 | exportin-4 protein, putative | HC | chr7:47862...   823   0.0  

>Medtr7g115710.1 | exportin-4 protein, putative | HC |
            chr7:47861948-47841908 | 20130731
          Length = 1172

 Score =  857 bits (2215), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/507 (82%), Positives = 440/507 (86%)

Query: 1    MRASIFSPRLMESIIWFLARWSHTYLMSCDGIGEKILDSSHHYEHSSKKALLSFFGEHKQ 60
            MR S+FSPRLMESIIWFLARWS TYLMS DGIGEKILDS HHYEHSSKK LLSFFGEH Q
Sbjct: 613  MRDSVFSPRLMESIIWFLARWSSTYLMSSDGIGEKILDSGHHYEHSSKKVLLSFFGEHNQ 672

Query: 61   GRLVLDIIVHISLITLTSYPGEKDLQGLTCYLLLHSLVQHKHICIHLVTLNSWHELATAF 120
            GR++LDIIV ISLITLTSYPGEKDLQGLTCY+LLHSLVQ +HIC+ LV LNSWHELA AF
Sbjct: 673  GRVILDIIVRISLITLTSYPGEKDLQGLTCYMLLHSLVQQRHICVQLVALNSWHELANAF 732

Query: 121  SGEKTLFLLDTAHQRSLAQTLVRSASGIKNLEASNQYVRNLMGHIAKYIVEISSKSNFKS 180
            S EKTLFLLD +HQRSLAQTLVRSASG++N E S+QYVRNLMGHIA YIVE+SSKSN K+
Sbjct: 733  STEKTLFLLDISHQRSLAQTLVRSASGVRNSEESSQYVRNLMGHIATYIVEMSSKSNLKN 792

Query: 181  IAQQPDILLSVSCMLERLRGAASASEPRTQKAIYELGFSVMNPILVLLEVYKHESAVVYL 240
            +AQQPDILLSVSCMLERLRGAASASEPRTQKAIYELGFSVMNPILVLLEVYKHESAVVYL
Sbjct: 793  VAQQPDILLSVSCMLERLRGAASASEPRTQKAIYELGFSVMNPILVLLEVYKHESAVVYL 852

Query: 241  LLKFVVGWVDGQITYLEAQETAAVVDFCMRLLQLYSSHNIGKIXXXXXXXXXXEAKTDQY 300
            LLKFVV WVDGQITYLEAQETAAVV+FCMRLLQLYSSHNIGKI          EA+TD+Y
Sbjct: 853  LLKFVVDWVDGQITYLEAQETAAVVNFCMRLLQLYSSHNIGKISLSLSSSLLSEAQTDKY 912

Query: 301  RDXXXXXXXXXXXXXKDMIDFSSDSIETQGTNISQVVYFGLHIVTPLISMDLLKYPKLCH 360
            +D             KDMIDFSSDSIE QGTNISQVVYFGLHIVTPLISMDLLKYPKLCH
Sbjct: 913  KDLRALLQLLSSLCSKDMIDFSSDSIEAQGTNISQVVYFGLHIVTPLISMDLLKYPKLCH 972

Query: 361  DYFSLLSHMLEVYPETFAQLNREAFAHVLGTLDFGLHHQDADVVSKCLRALQALASYHYK 420
            DYFSLLSH+LEVYPETFAQLN EAF H+LGTLDFGLHHQD DVVSKCLRALQALASYHYK
Sbjct: 973  DYFSLLSHLLEVYPETFAQLNSEAFNHILGTLDFGLHHQDVDVVSKCLRALQALASYHYK 1032

Query: 421  GAANGNIGLGLHGVGLEDSSGKIQEGXXXXXXXXXXXXXXXEDYSSDLISVAADALLPLI 480
               NGNIGLG H +GL+DSSG++QEG               EDYSSDLISVAADALLPLI
Sbjct: 1033 ETGNGNIGLGAHAMGLKDSSGEVQEGLLSRFLRSLLQLLFFEDYSSDLISVAADALLPLI 1092

Query: 481  LCEQGLYQRLGNELIERLANPTLRSRL 507
            LCE+GLYQRLGNELIER ANP LRSRL
Sbjct: 1093 LCEKGLYQRLGNELIERQANPNLRSRL 1119


>Medtr7g115710.2 | exportin-4 protein, putative | HC |
            chr7:47862206-47842476 | 20130731
          Length = 1105

 Score =  823 bits (2127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/488 (81%), Positives = 423/488 (86%)

Query: 1    MRASIFSPRLMESIIWFLARWSHTYLMSCDGIGEKILDSSHHYEHSSKKALLSFFGEHKQ 60
            MR S+FSPRLMESIIWFLARWS TYLMS DGIGEKILDS HHYEHSSKK LLSFFGEH Q
Sbjct: 613  MRDSVFSPRLMESIIWFLARWSSTYLMSSDGIGEKILDSGHHYEHSSKKVLLSFFGEHNQ 672

Query: 61   GRLVLDIIVHISLITLTSYPGEKDLQGLTCYLLLHSLVQHKHICIHLVTLNSWHELATAF 120
            GR++LDIIV ISLITLTSYPGEKDLQGLTCY+LLHSLVQ +HIC+ LV LNSWHELA AF
Sbjct: 673  GRVILDIIVRISLITLTSYPGEKDLQGLTCYMLLHSLVQQRHICVQLVALNSWHELANAF 732

Query: 121  SGEKTLFLLDTAHQRSLAQTLVRSASGIKNLEASNQYVRNLMGHIAKYIVEISSKSNFKS 180
            S EKTLFLLD +HQRSLAQTLVRSASG++N E S+QYVRNLMGHIA YIVE+SSKSN K+
Sbjct: 733  STEKTLFLLDISHQRSLAQTLVRSASGVRNSEESSQYVRNLMGHIATYIVEMSSKSNLKN 792

Query: 181  IAQQPDILLSVSCMLERLRGAASASEPRTQKAIYELGFSVMNPILVLLEVYKHESAVVYL 240
            +AQQPDILLSVSCMLERLRGAASASEPRTQKAIYELGFSVMNPILVLLEVYKHESAVVYL
Sbjct: 793  VAQQPDILLSVSCMLERLRGAASASEPRTQKAIYELGFSVMNPILVLLEVYKHESAVVYL 852

Query: 241  LLKFVVGWVDGQITYLEAQETAAVVDFCMRLLQLYSSHNIGKIXXXXXXXXXXEAKTDQY 300
            LLKFVV WVDGQITYLEAQETAAVV+FCMRLLQLYSSHNIGKI          EA+TD+Y
Sbjct: 853  LLKFVVDWVDGQITYLEAQETAAVVNFCMRLLQLYSSHNIGKISLSLSSSLLSEAQTDKY 912

Query: 301  RDXXXXXXXXXXXXXKDMIDFSSDSIETQGTNISQVVYFGLHIVTPLISMDLLKYPKLCH 360
            +D             KDMIDFSSDSIE QGTNISQVVYFGLHIVTPLISMDLLKYPKLCH
Sbjct: 913  KDLRALLQLLSSLCSKDMIDFSSDSIEAQGTNISQVVYFGLHIVTPLISMDLLKYPKLCH 972

Query: 361  DYFSLLSHMLEVYPETFAQLNREAFAHVLGTLDFGLHHQDADVVSKCLRALQALASYHYK 420
            DYFSLLSH+LEVYPETFAQLN EAF H+LGTLDFGLHHQD DVVSKCLRALQALASYHYK
Sbjct: 973  DYFSLLSHLLEVYPETFAQLNSEAFNHILGTLDFGLHHQDVDVVSKCLRALQALASYHYK 1032

Query: 421  GAANGNIGLGLHGVGLEDSSGKIQEGXXXXXXXXXXXXXXXEDYSSDLISVAADALLPLI 480
               NGNIGLG H +GL+DSSG++QEG               EDYSSDLISVAADALLPLI
Sbjct: 1033 ETGNGNIGLGAHAMGLKDSSGEVQEGLLSRFLRSLLQLLFFEDYSSDLISVAADALLPLI 1092

Query: 481  LCEQGLYQ 488
            LCE+GLYQ
Sbjct: 1093 LCEKGLYQ 1100