Miyakogusa Predicted Gene

Lj1g3v4997260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4997260.1 Non Characterized Hit- tr|A5C4J5|A5C4J5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,85.56,0,seg,NULL; DBD_Tnp_Mut,Transposase, MuDR, plant; MULE,MULE
transposase domain; SWIM,Zinc finger, SWIM,CUFF.33778.1
         (754 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g018850.1 | hypothetical protein | LC | chr2:6002946-60058...   103   5e-22
Medtr5g081480.1 | hypothetical protein | LC | chr5:34898739-3489...    73   1e-12
Medtr6g086685.1 | transposase-like protein, putative | LC | chr6...    72   2e-12
Medtr8g464800.1 | hypothetical protein | LC | chr8:22967551-2296...    71   3e-12
Medtr8g464080.1 | hypothetical protein | LC | chr8:22625395-2263...    70   6e-12
Medtr7g090610.1 | hypothetical protein | LC | chr7:35661825-3566...    68   4e-11
Medtr0177s0050.1 | hypothetical protein | LC | scaffold0177:2429...    61   4e-09

>Medtr2g018850.1 | hypothetical protein | LC | chr2:6002946-6005884
           | 20130731
          Length = 659

 Score =  103 bits (258), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 9/175 (5%)

Query: 243 IRTITDNHTCGG--ITHLGHQQASVQWVASSVEQRLRENPNCKPKEILEEIHKAHGITLS 300
           I  + D HTC    +T + H + S   +  SV+  L  + +   K I+  I +    T+S
Sbjct: 278 IGKMKDPHTCVSTELTQV-HCKLSYNVICESVKSLLHMDASITVKVIIAHIREKFNYTIS 336

Query: 301 YKQAWRGKERIMATMRGSFEEGYRLLPQYCEQLKRTNPGSIASVYGSPTDN-----CFQR 355
           Y++AWR K + + ++ G++E+ Y+ LPQ+   +++   G+I      P+        F+R
Sbjct: 337 YRKAWRAKNKAIESIYGNWEDSYKELPQWLMVMEKDLSGTIIDFQTDPSTEVVNEIVFKR 396

Query: 356 LFISFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPVAFGVV 410
           LF +F+  I GF   C+P++ +D T+L  KY GTLLL    DG+  +FP+AF +V
Sbjct: 397 LFWAFRPCILGF-EFCKPIVQIDATWLYGKYKGTLLLVVAQDGNNKIFPIAFAIV 450


>Medtr5g081480.1 | hypothetical protein | LC |
           chr5:34898739-34895435 | 20130731
          Length = 939

 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 11/152 (7%)

Query: 608 RANEAEFEVISHEGT---NIVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNVHRFTES 664
           R+ E +FEV    GT   N V+++   C CR W L  LPC HA++ + +   NV+ F   
Sbjct: 631 RSTEFDFEVRHVSGTGYKNHVNLQRWVCDCRKWLLTALPCCHAISCMRNQDLNVYDFVPD 690

Query: 665 CFTVATYRKTYSQTIHPIPDKSLWKELSEGDENAAKADQVLINXXXXXXXXXXXXXXXXX 724
            +    Y   YS  I+P   +SLWK     D          I                  
Sbjct: 691 IYKKDKYATCYSSVIYPANGQSLWKRTDYNDLQPPP-----IRKQPGRPKKKRNKEAHEL 745

Query: 725 AEDRGRVKRV---VHCSRCNQTGHFRTTCAAP 753
            +D  +++R    + CSRC Q+GH ++TC  P
Sbjct: 746 VKDDTQMRRARWGMKCSRCKQSGHNKSTCKLP 777



 Score = 70.9 bits (172), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 17/165 (10%)

Query: 228 WRIHVAKLAGVPTFTIRTITDNHTCGGITHLGHQQASVQWVASSVEQRLRENPNCKPKEI 287
           ++ +  K+    T+ +R I   H C     L  +  +  W+ S +  R+REN N K   I
Sbjct: 462 FKAYCGKIPNEETWQLRKIQRLHKCSRGFKL--KMLNFDWLGSKLHSRVRENQNLKLTTI 519

Query: 288 LEEIHKAHGITLSYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQLKRTNPGSIASVYGS 347
           +    +  G+ ++  +A+R + + +  + GSF E Y  L  Y  +L R+N GS   V   
Sbjct: 520 MNRTVEKWGLEINLNKAYRARGKAIDVIDGSFREQYTRLYDYTHELLRSNVGSTVRVSTM 579

Query: 348 PTDN------------C--FQRLFISFQASIYGFLNACRPLLGLD 378
           P               C  FQR++I F+A    F   CRP++GLD
Sbjct: 580 PFQGNEEDVERLGAVLCPHFQRMYICFKACKDSFFQ-CRPVIGLD 623


>Medtr6g086685.1 | transposase-like protein, putative | LC |
           chr6:32637826-32638380 | 20130731
          Length = 184

 Score = 72.0 bits (175), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 4/160 (2%)

Query: 260 HQQASVQWVASSVEQRLRENPNCKPKEILEEIHKAHGITLSYKQAWRGKERIMATMRGSF 319
           H++   + ++ +++  +    + K K I+  + +    T +Y++AW  K   + ++  ++
Sbjct: 25  HRKLKYKIISDNIKTLVHVVASTKSKLIITHVQEFFYYTTTYRKAWLEKNATIESIYRNW 84

Query: 320 EEGYRLLPQYCEQLKRTNPGSI---ASVYGSPTDNCFQRLFISFQASIYGFLNACRPLLG 376
           EE Y +LPQ+   +K T  G++    ++     +  F  L  +F  SI+GF   C+ ++ 
Sbjct: 85  EESYNVLPQWLNVMKETMLGTVFDLKTLNSEKGETQFYHLLWAFYPSIHGF-KYCKSVIH 143

Query: 377 LDRTYLKSKYLGTLLLATGFDGDGALFPVAFGVVDEENDD 416
            D  +L  KY GTL LA G DG+     +AF +V+ E  +
Sbjct: 144 ADGMWLYDKYKGTLFLAVGQDGNNKTILIAFELVEGETKE 183


>Medtr8g464800.1 | hypothetical protein | LC |
           chr8:22967551-22968879 | 20130731
          Length = 380

 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 9/187 (4%)

Query: 486 LWEAAHVLTVIEFESKILEIEEISQDAAYWIRRIPPRLWATAYFE-GQRFGHLTANIVES 544
           +W+AA      E+E  + EI  I+ +A  ++ + P R W+ ++F    +   L  N++++
Sbjct: 1   MWKAAKASYPQEWEKSMREIRSINPEAHKYLMQTPLRHWSKSWFRFDSKCDVLVNNMLDT 60

Query: 545 LDTWILDASGLPIVQMTECIRRQLM-TWFNERRETSMQWTSILVPSAERHVAEALERART 603
            ++ IL     PIV M E IR  LM  W   R +        ++P+ ++ + +  ER+R 
Sbjct: 61  FNSVILGPREKPIVTMFEEIRCYLMERWARNRSKMIELEAGAVLPNNKKKLLKERERSRF 120

Query: 604 YQVLRANEAEFEVISHEGTN---IVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQN--- 657
           +    + +  FEV +   T+    V++  + C CR W L G+P  HA+   +  + +   
Sbjct: 121 WMRRVSGDMLFEVYNRNQTSEQYAVNLDAQTCSCRSWMLTGIPGCHAITCYMDRKLDPDD 180

Query: 658 -VHRFTE 663
             H FTE
Sbjct: 181 YFHIFTE 187


>Medtr8g464080.1 | hypothetical protein | LC |
           chr8:22625395-22630202 | 20130731
          Length = 906

 Score = 70.5 bits (171), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 7/190 (3%)

Query: 504 EIEEISQDAAYWIRRIPPRLWATAYFEGQRFGHLTANIVESLDTWILDASGL---PIVQM 560
           +I + S DA  W+  IP + W  A+ EG+R+GH+T NI E ++  +     L   PIVQ 
Sbjct: 651 QIRDWSDDAVKWVDDIPKKQWLQAHDEGRRWGHMTTNISECVNNVLRGVHNLPISPIVQA 710

Query: 561 TECIRRQLMTWFNERRETSMQWTSILVPSAERHVAEALERARTYQVLRANEAEFEVISHE 620
           T     +L           M    I       ++A+    + T+QV   N  +      E
Sbjct: 711 TYYRSTELFVKRGSEARAMMASGKIYSDKVMDNLAKERAISNTHQVYIHNRGQSIFSVQE 770

Query: 621 GTNIVDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNVHRFTESCFTVATYRKTYSQTIH 680
                  R  C     +     PC+H +AA      +   +   C+T+      Y +   
Sbjct: 771 LVRPPSGRPTCI----FMALHYPCSHVIAACSKIHHDFMMYVSPCYTLQYVYNVYQEEFQ 826

Query: 681 PIPDKSLWKE 690
           P+P +S W E
Sbjct: 827 PVPHQSYWPE 836



 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 10/132 (7%)

Query: 260 HQQASVQWVASSVEQRLRENPNCKPKEILEEIHKAHGITLSYKQAWRGKERIMATMRGSF 319
           H+Q S  ++  S+ Q ++++       ++  I   +  T +Y +AW  K++ +  + G++
Sbjct: 505 HRQLSSAFICQSLLQMVKQDFTISVPVLIAHIRSKYTYTTTYMKAWIAKQKAIKMIYGNW 564

Query: 320 EEGYRLLPQYCEQLKRTNPGSIASV---------YGSPTDNCFQRLFISFQASIYGFLNA 370
           E+ Y  LP++    +   PG+I  +         Y  P    F+RLF SF+  I GF   
Sbjct: 565 EDAYTELPRWLLAFQTYLPGTIIDIETVPFIKDGYVVPGKATFKRLFWSFKPCIEGFA-Y 623

Query: 371 CRPLLGLDRTYL 382
           C+P++ +D T+L
Sbjct: 624 CKPVVSVDGTWL 635


>Medtr7g090610.1 | hypothetical protein | LC |
           chr7:35661825-35663059 | 20130731
          Length = 360

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 27/219 (12%)

Query: 541 IVESLDTWILDASGLPIVQMTECIRRQLMTWFNERRETSMQWTSILVPSAERHVAEALER 600
           + E+ ++ I+     PIV M E IR  L+  ++  R     +   ++P+ ++ +A     
Sbjct: 1   MSEAFNSTIVIPRQKPIVTMCEDIRVYLIEKWDANRTKIASYEDDVLPNIKKRIARESAY 60

Query: 601 ARTYQVLRANEAEFEVISHEGTNI---VDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQN 657
              + V R+ + +FEV    GT     V+++   C CR W L  LPC H ++ + +   N
Sbjct: 61  TSNWLVRRSTKFDFEVRHVSGTGYKYHVNLQMWVCDCRKWLLTALPCCHDISCMRNQDLN 120

Query: 658 VHRFTESCFTVATYRKTYSQTIHPIPDKSLWKELSEGDENAAKADQVLINXXXXXXXXXX 717
           V+ F    +    Y   YS  I+P P  ++ K+     +   K  + L+           
Sbjct: 121 VYDFVPDIYKNDKYVACYSSVIYPPP--AIRKQPGRPKKKRNKEARELV----------- 167

Query: 718 XXXXXXXAEDRGRVKRV---VHCSRCNQTGHFRTTCAAP 753
                   +D  +++R    + CS C Q+GH ++TC  P
Sbjct: 168 --------KDDTQMRRARWGMKCSSCRQSGHNKSTCKLP 198


>Medtr0177s0050.1 | hypothetical protein | LC |
           scaffold0177:24299-22979 | 20130731
          Length = 413

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 70/136 (51%), Gaps = 3/136 (2%)

Query: 211 KSDKTRFTAKCAS-EGCPWRIHVAKLAGVPTFTIRTITDNHTCGGITHLGHQQASVQWVA 269
           K+D  R    C S + C +   V+++AG  TF ++T++  HTCG + +  ++ A   W+A
Sbjct: 261 KNDAVRVRVICKSFDICNYTEFVSRVAGTHTFRVKTLSQKHTCGRVFY--NKNAKSDWLA 318

Query: 270 SSVEQRLRENPNCKPKEILEEIHKAHGITLSYKQAWRGKERIMATMRGSFEEGYRLLPQY 329
             + + ++ +   +  +++ E+   +   +++  A++ ++     + G   + Y LL  Y
Sbjct: 319 KVIFEGMKSSKRLQINDVVTEVRTKYSTGITFSTAFKARQIARKLVEGDSVKHYSLLWSY 378

Query: 330 CEQLKRTNPGSIASVY 345
            E L+R  P +I  ++
Sbjct: 379 SEDLQRACPRNICKLH 394