Miyakogusa Predicted Gene

Lj1g3v4996180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4996180.1 Non Characterized Hit- tr|A5C3T9|A5C3T9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,62.96,0.0000000003,FAD/NAD(P)-binding domain,NULL; seg,NULL;
NAD_binding_8,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
N,CUFF.33908.1
         (481 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g115310.1 | FAD/NAD(P)-binding oxidoreductase family prote...   754   0.0  
Medtr1g106590.1 | GRAS family transcription factor | HC | chr1:4...   157   2e-38
Medtr2g064620.1 | FAD/NAD(P)-binding oxidoreductase family prote...   112   1e-24

>Medtr7g115310.1 | FAD/NAD(P)-binding oxidoreductase family protein
           | HC | chr7:47633584-47625724 | 20130731
          Length = 867

 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/476 (80%), Positives = 418/476 (87%), Gaps = 3/476 (0%)

Query: 6   LNTWKLLPSTTPFLNTCSSASSSRFCMVRMDAXXXXXXXXXXXTRKYGTSRRSILKKTFK 65
           + TWKLLPST P+L    S+S++    V+M+            +  YGTSR+SILKKTFK
Sbjct: 395 MKTWKLLPSTVPYLINRPSSSTA-VATVKMEKPPSSNSKPRRRS-SYGTSRKSILKKTFK 452

Query: 66  QEQVTFTTPISDDPLVAIIGGGISGLICALFLEKRGVRSTVFDTGVHGLGGRMGTRVVDS 125
           QEQVTFT P SD+P VAIIGGGISGLICA+FL+KRG+RSTVFDTG+HGLGGR+GTR++D 
Sbjct: 453 QEQVTFTAPFSDEPHVAIIGGGISGLICAIFLDKRGIRSTVFDTGLHGLGGRLGTRIIDD 512

Query: 126 QSHPLIFDHAAQFFTVNDSRFMELVNAWMDKGLVREWEGTVGELQKGGQFLPFLPSPPRY 185
           +   L+FDHAAQFFTVNDSRF E+VN W+DKGLVREW+GTVGEL+ GG+FLPFLPSPPRY
Sbjct: 513 EYDSLVFDHAAQFFTVNDSRFAEIVNVWLDKGLVREWKGTVGELKNGGEFLPFLPSPPRY 572

Query: 186 IATNGMRFVADSLLSESRMVNVVRPCWISKLEPFNGMWHLSENGKPCGKFDAIVIAHNGK 245
           IAT GMRF+ADSLLS++ +VNV RPCWISKLEPFNGMWHLSENGKP GKFDAIVIAHNGK
Sbjct: 573 IATRGMRFLADSLLSQTSLVNVERPCWISKLEPFNGMWHLSENGKPRGKFDAIVIAHNGK 632

Query: 246 CANRLLMTSGLPLIAKQMKSLELNSIWALLAAFEDPLPFPGSTEVPFEGAFVRGIDSVSW 305
           CANRLLMTSGLPLIAKQMK LEL+SIWALLAAFE+ LPF  +TEV FEGAFVRGIDSVSW
Sbjct: 633 CANRLLMTSGLPLIAKQMKRLELSSIWALLAAFEETLPFLENTEVAFEGAFVRGIDSVSW 692

Query: 306 MANNTKKLQVSQSGGPHCWTFLSTAAYGKQNKVPQENIPAATTARVKAGMLEGVEAALGL 365
           MANNTKKL  SQS GPHCWTFLSTAAYGKQNKVPQENIP AT  RVK GMLEGVE ALGL
Sbjct: 693 MANNTKKLLASQSDGPHCWTFLSTAAYGKQNKVPQENIPTATATRVKEGMLEGVETALGL 752

Query: 366 SKGSLPEPFYTKLQLWGAALPTNTPGIPCIFDPFGRAGICGDWLLGSNIEAAVLSGVALA 425
           SKGSLP+PFYTKLQLWGAALPTNTPG+PCIFDPFGRAGICGDWLLGSNIEAAVLSG+ALA
Sbjct: 753 SKGSLPKPFYTKLQLWGAALPTNTPGVPCIFDPFGRAGICGDWLLGSNIEAAVLSGIALA 812

Query: 426 NHIADYCQSPAGSDAGEFAIGLNHEFQPLEGHDIGQFPGLVSEEKTKESQVYELAK 481
           NHIADY QS  G+D GEFA+GLNHEFQPLEGHDIGQFPGL SEEK  E+QVYELAK
Sbjct: 813 NHIADYIQS-LGTDPGEFAVGLNHEFQPLEGHDIGQFPGLGSEEKITEAQVYELAK 867


>Medtr1g106590.1 | GRAS family transcription factor | HC |
           chr1:48194978-48191881 | 20130731
          Length = 342

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/90 (81%), Positives = 78/90 (86%)

Query: 296 FVRGIDSVSWMANNTKKLQVSQSGGPHCWTFLSTAAYGKQNKVPQENIPAATTARVKAGM 355
           F++GIDSVSWMANNTKKL  SQS GPHCWTFLSTAAY KQNKVPQ+NIP  T  RV+ GM
Sbjct: 38  FLKGIDSVSWMANNTKKLLASQSNGPHCWTFLSTAAYEKQNKVPQKNIPTVTATRVREGM 97

Query: 356 LEGVEAALGLSKGSLPEPFYTKLQLWGAAL 385
           LEGVEAALGLSKGS P+PFYTKLQLWG  L
Sbjct: 98  LEGVEAALGLSKGSPPKPFYTKLQLWGLYL 127


>Medtr2g064620.1 | FAD/NAD(P)-binding oxidoreductase family protein
           | HC | chr2:29324465-29316459 | 20130731
          Length = 359

 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 167/371 (45%), Gaps = 39/371 (10%)

Query: 87  GISGLICALFLEKRGVRSTVFDTGVHGLGGRMGTRVVDSQS-HPLIFDHAAQFFTVNDSR 145
            +SG +CA  L + GV  T+F++   G GGRM  R   ++    L FDH A FF+V+   
Sbjct: 3   AVSGAVCASTLARNGVSVTLFESA-RGPGGRMSQRREKTEDGKELHFDHGAPFFSVSKPE 61

Query: 146 FMELVNAWMDKGLVREWEGTVGELQKGGQFLPFLPSP-----PRYIATNGMRFVADSLLS 200
              LV  W  +GLV EW    G      Q L F          R++   GM  +  +L +
Sbjct: 62  VARLVQEWESRGLVAEWREKFGSFDI--QTLKFDNIEQEGLSKRFVGVPGMNSICKALCN 119

Query: 201 ESRM-----VNVVRPCWISKLEPFNGMWHL-SENGKPCGKFDAIVIAHNGKCANRLLMTS 254
           ES +     V + R  W+        +W L   +G+  G+F  +V +     + R+   +
Sbjct: 120 ESGVESKFGVGIGRVEWLDD----EKLWSLIGVDGQNLGQFKGLVASDKNIVSTRIADVT 175

Query: 255 G---------LPLIAKQMKSLELNSIWALLAAFEDPLPFPGSTEVPFEGAFVRGIDSVSW 305
           G         LP +++++ +L +   +A++ AF +PL     + +P +G  ++    +SW
Sbjct: 176 GRLPPLDLKLLPELSEKLHNLPVRPCFAVMLAFAEPL-----STIPVKGFSIKNSKVLSW 230

Query: 306 MANNTKKLQVSQSGGPHCWTFLSTAAYGKQNKVPQENIPAATTARVKAGMLEGVEAALGL 365
              +++K    +S     W   STA Y  ++ + Q  +   +   +   + E +      
Sbjct: 231 AYCDSRK--PGRSTTSERWVLHSTAEYA-ESIIAQTGLKKPSDVTLNK-VAEELFQEFQR 286

Query: 366 SKGSLPEPFYTKLQLWGAALPTNTPGI--PCIFDPFGRAGICGDWLLGSNIEAAVLSGVA 423
           +   + +PF+ K   WG+A P  +      C++D   R  ICGD+ +  N+E A+ SG+A
Sbjct: 287 TGTKISQPFFKKAHRWGSAFPAASIAQEEKCLWDRNKRLAICGDFCVSPNVEGAIDSGLA 346

Query: 424 LANHIADYCQS 434
            A  + D   S
Sbjct: 347 AALRLKDISSS 357