Miyakogusa Predicted Gene

Lj1g3v4996170.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4996170.1 Non Characterized Hit- tr|B5TV73|B5TV73_CAMSI
Putative uncharacterized protein OS=Camellia sinensis
,37.35,0.00000005, ,CUFF.33907.1
         (163 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g115310.1 | FAD/NAD(P)-binding oxidoreductase family prote...   165   2e-41
Medtr1g080690.1 | TPX2 (targeting protein for Xklp2) family prot...    69   2e-12

>Medtr7g115310.1 | FAD/NAD(P)-binding oxidoreductase family protein
           | HC | chr7:47633584-47625724 | 20130731
          Length = 867

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/157 (64%), Positives = 114/157 (72%), Gaps = 23/157 (14%)

Query: 22  MGREVTGIQQVEDNKPNG-----RLGDRVRVSPKIAAMVQAIDHE--------------- 61
           MGREVTGIQ V D KPNG       GDR+RVSPKIA MVQA+DHE               
Sbjct: 1   MGREVTGIQ-VMDKKPNGLASNGSFGDRIRVSPKIAKMVQAMDHEIKESAEGNSFVEKHQ 59

Query: 62  -KKDVLSAKNTKLNAGLPPAEKNEKSEVQKVNDNQELSSPTAISISLDKEHTSPPAPQPS 120
            +KDVL+ K+TKLNAGL   EKNEKSE  K+  ++EL+SPTAI+I +DKEHTSP APQ S
Sbjct: 60  ERKDVLNTKSTKLNAGLS-EEKNEKSEEPKMEGDKELTSPTAITIPVDKEHTSPSAPQQS 118

Query: 121 DQATEKHVTHTQTVDTEAVATEQNLSPKANNMDSPNS 157
           DQATEKHVTHTQTVDTEAVA  Q+LSP ANN  SPN+
Sbjct: 119 DQATEKHVTHTQTVDTEAVANGQDLSPNANNTHSPNT 155


>Medtr1g080690.1 | TPX2 (targeting protein for Xklp2) family protein
           | HC | chr1:35884532-35888074 | 20130731
          Length = 369

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 80/165 (48%), Gaps = 44/165 (26%)

Query: 22  MGREVTGIQQVEDNKPNGRL-------GDRVRVSPKIAAM-VQAIDHE------------ 61
           MGR+VT +Q VED KPNG          D   V+ KIAA+ ++A DHE            
Sbjct: 1   MGRQVTEMQ-VEDQKPNGVAIALNGSPNDNGHVTSKIAAVKLEAEDHEVKECTEVNVFVE 59

Query: 62  ----KKDVLSAKNTKLNAGLPPAEKNEKSEVQK-VNDNQELSSPTAISISLDKEHTSPPA 116
                KD L AK T     L   E +EK EVQK    ++ELSS                 
Sbjct: 60  KCHETKDALVAKTTSGKNDLHEDE-SEKHEVQKKSGGDKELSST---------------- 102

Query: 117 PQPSDQATEKHVTHTQTVDTEAVATEQNLSPKANNMDSPNSSKNS 161
            QPSD  TEK+ ++T    TEAV    NLSP ANNM SP SSKNS
Sbjct: 103 -QPSDLVTEKNGSYTHVDTTEAVLAGLNLSPNANNMHSPYSSKNS 146