Miyakogusa Predicted Gene

Lj1g3v4981000.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4981000.1 Non Characterized Hit- tr|D8RZ40|D8RZ40_SELML
Putative uncharacterized protein OS=Selaginella
moelle,65,3e-19,TatA_E,Twin-arginine translocation protein TatA/E;
MttA_Hcf106,Twin-arginine translocation protein T,CUFF.33761.1
         (141 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g115180.1 | twin arginine translocase | HC | chr7:47559165...   123   5e-29
Medtr1g080910.1 | twin arginine translocase | HC | chr1:36004640...   105   1e-23
Medtr7g115180.2 | twin arginine translocase | HC | chr7:47559165...    80   5e-16
Medtr1g080910.2 | twin arginine translocase | HC | chr1:36004440...    72   2e-13
Medtr1g100220.1 | sec-independent protein translocase | HC | chr...    47   5e-06

>Medtr7g115180.1 | twin arginine translocase | HC |
           chr7:47559165-47561424 | 20130731
          Length = 144

 Score =  123 bits (309), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/102 (65%), Positives = 76/102 (74%), Gaps = 5/102 (4%)

Query: 41  SVAPPITTTPRRRNKGTALTCNALFGLGVPELXXXXXXXXXXFGPKKLPEVGRSIGKTLK 100
           S+ PP     RRR      TCNALFGLGVPEL          FGPKKLPEVGRSIGKT+K
Sbjct: 41  SINPP----RRRRINNNGFTCNALFGLGVPELVVIAGVAAIVFGPKKLPEVGRSIGKTVK 96

Query: 101 SFQQAAKEFETELKKEPDSIGGQ-SEEPLAVSEQEKQETEVS 141
           SFQQAAKEFE+ELKKEP S GG+ SE+ +AVSE++KQ+TEVS
Sbjct: 97  SFQQAAKEFESELKKEPGSSGGEPSEKSIAVSEEKKQDTEVS 138


>Medtr1g080910.1 | twin arginine translocase | HC |
           chr1:36004640-36003563 | 20130731
          Length = 139

 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/92 (61%), Positives = 65/92 (70%), Gaps = 5/92 (5%)

Query: 51  RRRNKGTA-LTCNALFGLGVPELXXXXXXXXXXFGPKKLPEVGRSIGKTLKSFQQAAKEF 109
           R R + T   TCNA FGLGVPEL          FGPKKLPEVGRSIGKT+KSFQQAAKEF
Sbjct: 46  RTRTRSTKRFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEF 105

Query: 110 ETELKKEPDSIGGQSEEPLAVSEQEKQETEVS 141
           ETELKKEP+S    +EE    ++QE Q+ +VS
Sbjct: 106 ETELKKEPNS----TEEISVTNDQEDQDNKVS 133


>Medtr7g115180.2 | twin arginine translocase | HC |
           chr7:47559165-47560473 | 20130731
          Length = 121

 Score = 80.5 bits (197), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 40  ASVAPPITTTPRRRNKGTALTCNALFGLGVPELXXXXXXXXXXFGPKKLPEVGRSIGKTL 99
            S+ PP     RRR      TCNALFGLGVPEL          FGPKKLPEVGRSIGKT+
Sbjct: 40  VSINPP----RRRRINNNGFTCNALFGLGVPELVVIAGVAAIVFGPKKLPEVGRSIGKTV 95

Query: 100 KSFQQAAKEFETELKKEPDSIGGQSE 125
           KSFQQ       E + + +S G + E
Sbjct: 96  KSFQQTKWRIPFETRTQLESHGFEPE 121


>Medtr1g080910.2 | twin arginine translocase | HC |
           chr1:36004440-36003570 | 20130731
          Length = 107

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/55 (65%), Positives = 38/55 (69%), Gaps = 1/55 (1%)

Query: 51  RRRNKGTA-LTCNALFGLGVPELXXXXXXXXXXFGPKKLPEVGRSIGKTLKSFQQ 104
           R R + T   TCNA FGLGVPEL          FGPKKLPEVGRSIGKT+KSFQQ
Sbjct: 46  RTRTRSTKRFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQ 100


>Medtr1g100220.1 | sec-independent protein translocase | HC |
           chr1:45171283-45165728 | 20130731
          Length = 258

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 8/71 (11%)

Query: 53  RNKGTALTCNALFGLGVPELXXXXXXXXXXFGPKKLPEVGRSIGKTLKSF-------QQA 105
           R KG  +   +LFG+G PE           FGPK L EV R++GKTL+ F       Q  
Sbjct: 77  RCKGNVVYA-SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLREFQPTIREIQDV 135

Query: 106 AKEFETELKKE 116
           ++EF++ L++E
Sbjct: 136 SREFKSTLERE 146