Miyakogusa Predicted Gene

Lj1g3v4957710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4957710.1 tr|B9HMZ5|B9HMZ5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_557514 PE=4
SV=1,35.67,2e-18,DUF573,Protein of unknown function DUF573; seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.33738.1
         (398 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g114600.1 | DUF573 family protein | HC | chr7:47322775-473...   338   4e-93
Medtr1g081580.1 | transcription regulator | HC | chr1:36256584-3...   250   2e-66
Medtr1g081560.1 | transcription regulator | HC | chr1:36253804-3...   170   3e-42
Medtr1g081570.1 | DUF573 family protein | HC | chr1:36255671-362...    83   5e-16
Medtr3g070120.1 | DUF573 family protein | HC | chr3:31400868-313...    75   1e-13
Medtr2g010790.1 | DNA-binding storekeeper protein-related transc...    72   7e-13

>Medtr7g114600.1 | DUF573 family protein | HC |
           chr7:47322775-47320756 | 20130731
          Length = 441

 Score =  338 bits (868), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 217/451 (48%), Positives = 249/451 (55%), Gaps = 79/451 (17%)

Query: 1   MASEQHDTVFPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 60
           MAS+QHDTVFP++                                              +
Sbjct: 1   MASQQHDTVFPEEDIDDEEDEFHEYEEEDEEDDDVLVDDEENDLPSASASISVPSVTVAV 60

Query: 61  SNGATTTVPIQSSAATTIV----TPYSDPKRHRTXXXXXXXXXXXXDDSRRLFQRLWTDE 116
             GA    PI +  ATTI+    T  SD KR R             +DSR+LFQRLWTDE
Sbjct: 61  PGGALRP-PILTPTATTIIFADSTFSSDSKRQR-LDQIEEKKPLLVEDSRKLFQRLWTDE 118

Query: 117 DEMELLQGFLDYTTQRGSSNQTDTALFYDQIKSKLQLDFNKSQLVEKIRRLKKKYRNVVN 176
           DEMELLQGFLDYTTQRGSS+  DTA FYDQIKSKLQLDFNK+QLVEKIRRLKKKYRNVV+
Sbjct: 119 DEMELLQGFLDYTTQRGSSHHNDTAQFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVVS 178

Query: 177 RISSGKDFSFKTAHDQATFEVSRKIWGNVTPIAATDDMIAVDDDEIXXXXXXXXXXXXXF 236
           ++SSGK+F FKTAHDQATFE+SRKIW NV PIA     IA+DDDEI             F
Sbjct: 179 KMSSGKEFVFKTAHDQATFEISRKIWNNVAPIAGD---IAIDDDEI--NLNPISNPNLNF 233

Query: 237 SSPVLKYEVIFGNSTEKKTRKRSRP-SPAIKSVEKRELNLNDGAACSKDR---------- 285
           +  +LK EV   NST   TRKRSRP S +I+S EKRE   ND  A ++DR          
Sbjct: 234 TPVILKSEV---NST---TRKRSRPRSVSIRSFEKRE--SNDAVASNRDRDYLNINLNNP 285

Query: 286 --------------------------------------NVXXXXXXXXXSDNCDSGNGNV 307
                                                 N          S+NC +    V
Sbjct: 286 NPNPYPNHNHHPNPNPNAYTTTATVNPAITPTITTPNVNTNAAIHANNYSNNCSTAGNGV 345

Query: 308 AGLIEETVKSCLSPLLKELVAGAM-------RGPFGARGLSPVGLMNLGF--GELVDEKW 358
           AG+IEETV+SCLSP  KEL+AGAM       RG F    L P  +MNLGF  GEL DEKW
Sbjct: 346 AGVIEETVRSCLSP-FKELMAGAMGGGLFASRGSFAMNPL-PFQMMNLGFGGGELADEKW 403

Query: 359 RKQQILELEVYSKRLELVQDQVKATMEELRS 389
           RKQQILELEVYSKRLELVQDQ+K +++ELRS
Sbjct: 404 RKQQILELEVYSKRLELVQDQIKTSLDELRS 434


>Medtr1g081580.1 | transcription regulator | HC |
           chr1:36256584-36258195 | 20130731
          Length = 387

 Score =  250 bits (639), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 158/354 (44%), Positives = 196/354 (55%), Gaps = 65/354 (18%)

Query: 64  ATTTVPI-------QSSAATTIVTPYSDPKRHRTXXXXXXXXXXXXDDSRRLFQRLWTDE 116
           AT  VP         +SA+ T +    +PKR                DSR+LFQR+WT+E
Sbjct: 53  ATAAVPTSVILALPHASASATTIDGSPEPKR--------EPMEEKTSDSRKLFQRIWTEE 104

Query: 117 DEMELLQGFLDYTTQRGSSNQTDTALFYDQIKSKLQLDFNKSQLVEKIRRLKKKYRNVVN 176
           DE+ +LQGFLDY   R SS   DT  FYD +K K+QLDF KSQLV+K+RRLKKKYR  + 
Sbjct: 105 DEITILQGFLDYNANRESSYHNDTGSFYDHMKGKIQLDFTKSQLVDKLRRLKKKYRTALQ 164

Query: 177 RISSGKDFSFKTAHDQATFEVSRKIW---GNVTPIAATDDMIAVDDDEIXXXXXXXXXXX 233
           +  SGKDF FK+ HDQA FE+S KIW   GN TPI     +   +DDEI           
Sbjct: 165 KFDSGKDFGFKSTHDQAAFEISHKIWNINGNSTPIG----VPVEEDDEIIPNPNPN---- 216

Query: 234 XXFSSPVLKYEVIFGNSTEKKTRKRSRPSPAIKSVEKRELNLNDGAACSKDRN--VXXXX 291
              SS + + + +       ++RKRSR      + E+    LND    SKD +       
Sbjct: 217 ---SSHLAEKKAV-------QSRKRSR------AAEEERHELND----SKDNHQNNSGNT 256

Query: 292 XXXXXSDNCDSGNG----NVAGLIEETVKSCLSPLLKELVAGAMRGP------------F 335
                 +N +  NG    NV GLIEETVKSCL+P+LKEL    M G              
Sbjct: 257 NSSNVDENREKSNGNHVHNVPGLIEETVKSCLTPVLKELSNATMSGSPFGFGGRGFGAGG 316

Query: 336 GARGLSPVGLMNLGFGE-LVDEKWRKQQILELEVYSKRLELVQDQVKATMEELR 388
            +    P+G +NLG GE  VD+KWRKQQILELEVYSKRLELVQD+VKA +EELR
Sbjct: 317 FSMNTVPLGFLNLGSGEKAVDDKWRKQQILELEVYSKRLELVQDEVKAAIEELR 370


>Medtr1g081560.1 | transcription regulator | HC |
           chr1:36253804-36252660 | 20130731
          Length = 375

 Score =  170 bits (430), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/300 (38%), Positives = 161/300 (53%), Gaps = 66/300 (22%)

Query: 104 DSRRLFQRLWTDEDEMELLQGFLDYTTQRGSSN---QTDTALFYDQIKSKLQLDFNKSQL 160
           D  + +QRLWT +DE+ELL+G+LDY  Q+G +N   Q+  A FYDQ+  K  ++FN++QL
Sbjct: 127 DGVKQYQRLWTKQDEIELLKGYLDYIKQQGRANTTIQSGVASFYDQVIPKFSVEFNRNQL 186

Query: 161 VEKIRRLKKKYRNVVNRISSGKD--FSFKTAHDQATFEVSRKIWGNVTPIAATDDMIAVD 218
           VEK+RRLK+K++  +++   GK+   SFK   +QA FE+S KIWGN T      D++ VD
Sbjct: 187 VEKLRRLKRKHKMTLDK---GKEVQISFKIPQEQAIFEISHKIWGNDT----DHDVLDVD 239

Query: 219 DDEIXXXXXXXXXXXXXFSSPVLKYEVIFGNSTEKKTRKRSRPSP-AIKSVEKRELNLND 277
           D                                       SRP P +   +E  +L   D
Sbjct: 240 D---------------------------------------SRPVPESPDLIENIKLKAED 260

Query: 278 GAACSKDRNVXXXXXXXXXSDNCDSGN-------GNVAGLIEETVKSCLSPLLKELVAGA 330
              C ++ +          +D+ +S N        ++ G IEET+KSC SPLLKEL+   
Sbjct: 261 VDNC-EETDKRAHKRVRLTTDDVNSKNYQSNSDATSLRGFIEETMKSCFSPLLKELLDDV 319

Query: 331 MRGPFGARGLSPVGLMNLGFGELVDEKWRKQQILELEVYSKRLELVQDQVKATMEELRSS 390
              P GA        M L  GE+ DEKW K++ILELEVY  RLEL+Q Q+KA +EEL+SS
Sbjct: 320 PVEPPGALP------MLLSTGEVRDEKWLKRRILELEVYLNRLELLQGQIKARLEELKSS 373


>Medtr1g081570.1 | DUF573 family protein | HC |
           chr1:36255671-36255246 | 20130731
          Length = 99

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 15/87 (17%)

Query: 115 DEDEMELLQGFLDYTTQRGSSNQTDTALFYDQIKSKLQLDFNKSQLVEKIRRLKKKYRNV 174
           +EDE+ +LQGFLDY   RGSS   D   FYDQIK                RRLKK +  V
Sbjct: 28  NEDEITILQGFLDYNVNRGSSYHNDIGSFYDQIK---------------FRRLKKNHCMV 72

Query: 175 VNRISSGKDFSFKTAHDQATFEVSRKI 201
           +++   GKDF+FK AH QATFE+S KI
Sbjct: 73  LHKFDFGKDFAFKRAHYQATFEISHKI 99


>Medtr3g070120.1 | DUF573 family protein | HC |
           chr3:31400868-31399419 | 20130731
          Length = 377

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 109 FQRLWTDEDEMELLQGFLDYTTQRGSSNQTDTALFYDQIKSKLQLDFNKSQLVEKIRRLK 168
           FQR++T++DE+ +LQG +D+T + G+      + FY  +K  +       QL +K+RRL+
Sbjct: 153 FQRVFTEDDEVAILQGLVDFTAKSGNDPTKHLSAFYQIVKKSVHFKVTLDQLRDKVRRLR 212

Query: 169 KKYRNVVNRISSGKDFSFKTAHDQATFEVSRKIWG 203
            KY    N+I S K  +F    ++  FE+S+KIWG
Sbjct: 213 LKYE---NKIKSKKTPTFSKPVEETMFELSKKIWG 244


>Medtr2g010790.1 | DNA-binding storekeeper protein-related
           transcriptional regulator, putative | HC |
           chr2:2529538-2531249 | 20130731
          Length = 420

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 120/293 (40%), Gaps = 82/293 (27%)

Query: 103 DDSRRLFQRLWTDEDEMELLQGFLDYTTQRGSSNQTDTALFYDQIKSKLQLDFNKSQLVE 162
           +DS++ FQR++++EDE+ +L+G  D+  + G     +TA F+  +K  L+ D N  QL  
Sbjct: 198 EDSKKNFQRVFSEEDELVILKGLGDFVAKTGKDPMKETAAFHSFVKKLLKADANAEQLKR 257

Query: 163 KIRRLKKKYRNVVNRISSGKDFSFKTAHDQATFEVSRKIWGNVTPIAATDDMIAVDDDEI 222
           K+R LKKK+ +  N         F   HD+  F++  K+W       A ++         
Sbjct: 258 KVRGLKKKFESSDN---------FTKPHDKRAFDLF-KVWSKNASKEAEEN--------- 298

Query: 223 XXXXXXXXXXXXXFSSPVLKYEVIFGNSTEKKTRKRSRPSPAIKSVEKRELNLNDGAACS 282
                                    G S EK           I    K+E  + +G +  
Sbjct: 299 -------------------------GKSNEK-----------IAKSAKKEAPVKNGGSAK 322

Query: 283 KDRNVXXXXXXXXXSDNCDSGNGNVAGLIEETVKSCLSPLLKELV-----AG--AMRGPF 335
           K+  +                  NV+G +E  V      +L ELV     AG   +    
Sbjct: 323 KELAIVTK---------------NVSGKVESGVGKSF--ILSELVKFDEAAGIAVLDKDA 365

Query: 336 GARGLSPVGLMNLGFGELVDEKWRKQQILELEVYSKRLELVQDQVKATMEELR 388
              GL    LM       ++E+W+K Q  E++V+  R E+V++Q +  M+EL+
Sbjct: 366 AESGLE---LMRESDRVELEERWKKLQAAEMDVFLNRAEVVREQTRLAMQELK 415