Miyakogusa Predicted Gene
- Lj1g3v4955410.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4955410.2 Non Characterized Hit- tr|Q01BE3|Q01BE3_OSTTA
Putative HASTY (ISS) (Fragment) OS=Ostreococcus tauri
,41.46,8e-17,seg,NULL; EXPORTIN 5,NULL; EXPORTIN 1/5,NULL; no
description,Armadillo-like helical; Xpo1,Exportin-1,CUFF.33716.2
(308 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g114260.1 | HASTY 1 | HC | chr7:47155771-47146046 | 20130731 422 e-118
Medtr1g063040.1 | HASTY 1 | LC | chr1:27704528-27710520 | 20130731 315 3e-86
>Medtr7g114260.1 | HASTY 1 | HC | chr7:47155771-47146046 | 20130731
Length = 1191
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/309 (68%), Positives = 235/309 (76%), Gaps = 1/309 (0%)
Query: 1 MDDTHTNNVAQAIATALDWASTPSARQSAAAFLDSIKA-GDVRVLANTSFLLVKKNWSPE 59
M+D+ +NVAQAIATAL+W+STP +RQ A +FLDS+KA GD+R LANT FLLVK+NWS E
Sbjct: 1 MEDSSVHNVAQAIATALNWSSTPDSRQQALSFLDSMKASGDIRTLANTLFLLVKRNWSSE 60
Query: 60 IRLHAFKMLQHLVRLRWEELSPAEHRNFANLSVDLMSEIADPGENWALKSQTAALVAEIV 119
IRLHAFKMLQHLVRLRWEELS EH+NFA LS+DLM +IADP ENWALKSQTAALVAEIV
Sbjct: 61 IRLHAFKMLQHLVRLRWEELSSEEHKNFAKLSMDLMYDIADPSENWALKSQTAALVAEIV 120
Query: 120 RSEGLNLWQEMLPSLVSLSDKGPIQAELVSMMLRWLPEDITVHNEXXXXXXXXXXXXXXX 179
R EGL+LW+E+ PSLV+LS KGPIQAELVSMMLRWLPEDITVHNE
Sbjct: 121 RREGLDLWREIHPSLVTLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGERRRLLLRGLT 180
Query: 180 XXXXXXXXXXXXXXXRHFTAALNEAGRKQMDIAKLHXXXXXXXXXXXXXXXEWAPLSDLA 239
RHF AALNEAGRKQ DIAKLH EWAPL+DL+
Sbjct: 181 ESLPEILPLLYSLLERHFVAALNEAGRKQTDIAKLHAAAVTAALNAIIAYAEWAPLTDLS 240
Query: 240 KSGIIHGCAFLLSAPDFRLHASEFFKLVSPRKRPADPSASEFDQAMRSIFQTLMNISRDF 299
KSGII+GC FLLSAPDFRLHAS+FFKLVS RKR D SASE DQ MR IFQ LMNISRDF
Sbjct: 241 KSGIINGCGFLLSAPDFRLHASDFFKLVSSRKRSVDASASEIDQVMREIFQLLMNISRDF 300
Query: 300 LYRSGSGPG 308
LY+SGS PG
Sbjct: 301 LYKSGSVPG 309
>Medtr1g063040.1 | HASTY 1 | LC | chr1:27704528-27710520 | 20130731
Length = 980
Score = 315 bits (807), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/283 (59%), Positives = 189/283 (66%), Gaps = 12/283 (4%)
Query: 38 AGDVRVLANTSFLLVKKNWSPEIRLHAFKMLQHLVRLRWEELSPAEHRNFANLSVDLMSE 97
+GD+R L T FLLVKKNWS EIRLHAFKMLQHLVRL+WEELSP EH+NFA LS+DLM E
Sbjct: 4 SGDIRTLPTTLFLLVKKNWSSEIRLHAFKMLQHLVRLKWEELSPKEHKNFAKLSIDLMYE 63
Query: 98 IADPGENWALKSQTAALVAE------IVRSEGLNL-W-QEMLP----SLVSLSDKGPIQA 145
IADP E+W LKSQT L+ IVR EGL L W +EMLP S+ S+ QA
Sbjct: 64 IADPCEDWTLKSQTLLLILSHLQFRLIVRREGLVLLWHEEMLPIFGYSIQQGSNTSKFQA 123
Query: 146 ELVSMMLRWLPEDITVHNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHFTAALNEAG 205
ELVSMMLRWL EDITVHNE +H TAAL+EA
Sbjct: 124 ELVSMMLRWLSEDITVHNEDLEGDRRRLLLRWVTQSLPETLPLLHTLLEKHCTAALSEAS 183
Query: 206 RKQMDIAKLHXXXXXXXXXXXXXXXEWAPLSDLAKSGIIHGCAFLLSAPDFRLHASEFFK 265
RKQ+D+AKLH EWAPL+DLAKSGII+ C FLLSAP+FRLHASEFFK
Sbjct: 184 RKQIDVAKLHAAAVTATLNAVIAYAEWAPLTDLAKSGIINLCGFLLSAPEFRLHASEFFK 243
Query: 266 LVSPRKRPADPSASEFDQAMRSIFQTLMNISRDFLYRSGSGPG 308
LVS RKR D SASE DQ MR IFQ LMNISR+FL++SGSG G
Sbjct: 244 LVSSRKRSVDASASEIDQVMRDIFQILMNISREFLHKSGSGLG 286