Miyakogusa Predicted Gene

Lj1g3v4955290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4955290.1 Non Characterized Hit- tr|I1JJ48|I1JJ48_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,46.07,0.0000001,coiled-coil,NULL,CUFF.33704.1
         (190 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091710.1 | tropomyosin-like protein, putative | HC | chr5...    54   1e-07

>Medtr5g091710.1 | tropomyosin-like protein, putative | HC |
           chr5:40018589-40021260 | 20130731
          Length = 345

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 18/109 (16%)

Query: 11  VVMMECDMATNAEAAKLMK--------ALEDKES----LEKQVQELKKVNSEKEMLMRDL 58
           +  M+ DM T+  A + MK         L+DKE     L K+V+ LKKV +E E  ++DL
Sbjct: 130 IARMQHDMITDMSAGEEMKKEAEGLKEVLKDKEGRVEELVKEVEGLKKVKAESEARVKDL 189

Query: 59  QRKIWVLKMKEVQERDSRI------RDTIDYHKEKIILLRQGLEGFEKL 101
           +++I VL+MKE++ER+ RI      RDTI     +I   R  +E  EK+
Sbjct: 190 EKRIGVLEMKEIEERNKRIRVEEELRDTIGEKDREIDGFRNKVEELEKV 238