Miyakogusa Predicted Gene
- Lj1g3v4954920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4954920.1 Non Characterized Hit- tr|I1NC11|I1NC11_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,71.72,0,HLH,Helix-loop-helix domain; seg,NULL; HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix dom,CUFF.33673.1
(375 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g113830.1 | transcription factor | HC | chr7:46921384-4692... 356 2e-98
Medtr1g082480.1 | basic helix loop helix (BHLH) DNA-binding fami... 348 3e-96
Medtr1g082480.2 | basic helix loop helix (BHLH) DNA-binding fami... 300 1e-81
Medtr3g099620.1 | basic helix loop helix (BHLH) DNA-binding fami... 250 2e-66
Medtr8g066770.1 | transcription factor | HC | chr8:27763142-2776... 213 2e-55
Medtr5g064950.1 | basic helix loop helix (BHLH) DNA-binding fami... 211 6e-55
Medtr5g064950.2 | basic helix loop helix (BHLH) DNA-binding fami... 186 4e-47
Medtr8g024210.1 | transcription factor | HC | chr8:8874219-88716... 171 8e-43
Medtr0194s0050.1 | transcription factor | HC | scaffold0194:2569... 165 7e-41
Medtr2g022280.1 | basic helix loop helix (BHLH) DNA-binding fami... 122 5e-28
Medtr1g028470.1 | basic helix loop helix (BHLH) DNA-binding fami... 115 6e-26
Medtr3g090850.1 | transcription factor | HC | chr3:41256456-4125... 99 1e-20
Medtr8g024790.1 | basic helix loop helix (bHLH) family transcrip... 60 5e-09
Medtr1g072320.1 | bHLH transcription factor | HC | chr1:32103626... 59 9e-09
Medtr8g024770.1 | basic helix loop helix (bHLH) family transcrip... 55 1e-07
Medtr1g112680.1 | transcription factor aborted microspores-like ... 54 2e-07
Medtr2g104530.1 | helix loop helix DNA-binding domain protein | ... 54 4e-07
Medtr7g117670.1 | ABA-inducible bHLH-type transcription factor |... 52 7e-07
Medtr5g030430.1 | basic helix loop helix (bHLH) family transcrip... 52 1e-06
Medtr8g098275.2 | bHLH transcription factor | HC | chr8:41000355... 52 1e-06
Medtr8g098275.3 | bHLH transcription factor | HC | chr8:41001796... 52 1e-06
Medtr8g098275.1 | bHLH transcription factor | HC | chr8:41000594... 52 1e-06
Medtr8g067280.1 | basic helix loop helix (bHLH) family transcrip... 52 1e-06
Medtr8g027495.1 | ABA-inducible bHLH-type transcription factor |... 50 3e-06
Medtr5g014600.1 | basic helix loop helix (bHLH) DNA-binding fami... 50 4e-06
>Medtr7g113830.1 | transcription factor | HC |
chr7:46921384-46922800 | 20130731
Length = 316
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/340 (60%), Positives = 233/340 (68%), Gaps = 43/340 (12%)
Query: 41 RAMALEAVVYPQPQDPFGYGI-KDH---NLLADVELSNWGYEDFNLNLENEQQQGGSISI 96
R+MALE + PQDPF YG KDH NLL D E +N+ Y +FNL +NE+Q G +S
Sbjct: 12 RSMALEPTLL-YPQDPFTYGFNKDHYNYNLLTDSE-ANFDYTNFNL--QNEEQ--GFVS- 64
Query: 97 CSFLENQ-TENYPCVDWSPQSMEVELPHKNEQNMSNPSSDASNCNTHNLDXXXXXXXXXX 155
+FL+NQ TENYP +WS +NC + LD
Sbjct: 65 -TFLKNQQTENYPYENWS-----------------------NNCPS--LDSSISTRSRSK 98
Query: 156 XXXXXXXXNKEEIENQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAI 215
NKEEIENQRMTHIAVERNRRKQ+NEYLSVLRS+MPESYV RGDQASIIGGAI
Sbjct: 99 KRRVKTSKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAI 158
Query: 216 NFVKELEQKLQFLGVQKEKEGKSDVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXXXK 275
NFVK+LEQKLQFLGVQK+KEGK D + N NKPFSEFFTFPQY
Sbjct: 159 NFVKKLEQKLQFLGVQKQKEGKFDTIV---ENKNKPFSEFFTFPQYSTSDGVCESSETKM 215
Query: 276 GEQLSAVQSGIADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGE 335
G ++ + IADIEV MVESHANLKIR+KK PKQLLKMVSSLHG+ LTILHLNVTT E
Sbjct: 216 GGEVQS--RNIADIEVTMVESHANLKIRTKKRPKQLLKMVSSLHGLCLTILHLNVTTADE 273
Query: 336 IVLYSISVKVEDDCKLGSVDEIAAAIYQMLDRIQQESNLN 375
V YS+SVKVEDDCKLGSVDEIAAAIYQ+L+ IQQES++N
Sbjct: 274 FVFYSLSVKVEDDCKLGSVDEIAAAIYQILESIQQESSIN 313
>Medtr1g082480.1 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr1:36677044-36674657 | 20130731
Length = 337
Score = 348 bits (894), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 231/344 (67%), Gaps = 23/344 (6%)
Query: 39 KVRAMALEAVVYPQPQDPFGYGIKDHNLLADVELSNWGYEDFNLNLENEQQQGGSISICS 98
+V+ MALEAVVYPQ QDPF YGIKD + +FN N ++Q S
Sbjct: 10 RVKDMALEAVVYPQTQDPFSYGIKD-------------FYNFNFNTLVAKEQEQEHRSFS 56
Query: 99 FLENQTENY--PCVDWSPQ-SMEVELPHKNE--QNMSNPSSDASNCNTHNLDXXXXXXXX 153
F+ENQTEN P VDW+ S PH NE + ++PSS+ +N +
Sbjct: 57 FVENQTENNCPPYVDWNNNNSSTFSPPHLNEVQETTTDPSSNTNNTQNFHASPSVNTVIR 116
Query: 154 XXXXXXXXXXNKEEIENQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGG 213
NKEEIENQRMTHIAVERNRRKQ+NEYLS+LRS+MP+S++ RGDQASIIGG
Sbjct: 117 PKRRRARSRKNKEEIENQRMTHIAVERNRRKQMNEYLSILRSLMPDSHIQRGDQASIIGG 176
Query: 214 AINFVKELEQKLQFLGVQKEKEGKSDVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXX 273
AINFVKELE K FLG +KE+ KSD A ++N PFSEFFTFPQY
Sbjct: 177 AINFVKELEHKFHFLGAKKERVVKSDE---AGGSNNMPFSEFFTFPQYSTSGSVCDNSNS 233
Query: 274 XK--GEQLSAVQSGIADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVT 331
GE++ +QS IADIEV MVE+HANLKIRS+K PKQLLK+VS L MRLTILHLNVT
Sbjct: 234 VATIGEKVGEIQSCIADIEVTMVENHANLKIRSRKRPKQLLKIVSGLQNMRLTILHLNVT 293
Query: 332 TTGEIVLYSISVKVEDDCKLGSVDEIAAAIYQMLDRIQQESNLN 375
T GEIVLYS+SVKVEDDCKLGSVD+IA+A+YQ + RIQQE+ LN
Sbjct: 294 TIGEIVLYSLSVKVEDDCKLGSVDDIASAVYQTVTRIQQEAMLN 337
>Medtr1g082480.2 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr1:36677044-36674771 | 20130731
Length = 336
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/314 (55%), Positives = 204/314 (64%), Gaps = 23/314 (7%)
Query: 39 KVRAMALEAVVYPQPQDPFGYGIKDHNLLADVELSNWGYEDFNLNLENEQQQGGSISICS 98
+V+ MALEAVVYPQ QDPF YGIKD + +FN N ++Q S
Sbjct: 10 RVKDMALEAVVYPQTQDPFSYGIKD-------------FYNFNFNTLVAKEQEQEHRSFS 56
Query: 99 FLENQTENY--PCVDWSPQ-SMEVELPHKNE--QNMSNPSSDASNCNTHNLDXXXXXXXX 153
F+ENQTEN P VDW+ S PH NE + ++PSS+ +N +
Sbjct: 57 FVENQTENNCPPYVDWNNNNSSTFSPPHLNEVQETTTDPSSNTNNTQNFHASPSVNTVIR 116
Query: 154 XXXXXXXXXXNKEEIENQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGG 213
NKEEIENQRMTHIAVERNRRKQ+NEYLS+LRS+MP+S++ RGDQASIIGG
Sbjct: 117 PKRRRARSRKNKEEIENQRMTHIAVERNRRKQMNEYLSILRSLMPDSHIQRGDQASIIGG 176
Query: 214 AINFVKELEQKLQFLGVQKEKEGKSDVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXX 273
AINFVKELE K FLG +KE+ KSD A ++N PFSEFFTFPQY
Sbjct: 177 AINFVKELEHKFHFLGAKKERVVKSDE---AGGSNNMPFSEFFTFPQYSTSGSVCDNSNS 233
Query: 274 XK--GEQLSAVQSGIADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVT 331
GE++ +QS IADIEV MVE+HANLKIRS+K PKQLLK+VS L MRLTILHLNVT
Sbjct: 234 VATIGEKVGEIQSCIADIEVTMVENHANLKIRSRKRPKQLLKIVSGLQNMRLTILHLNVT 293
Query: 332 TTGEIVLYSISVKV 345
T GEIVLYS+SVKV
Sbjct: 294 TIGEIVLYSLSVKV 307
>Medtr3g099620.1 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr3:45673320-45670902 | 20130731
Length = 321
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 204/340 (60%), Gaps = 36/340 (10%)
Query: 43 MALEAVVYPQPQDPFGYGIKDHNLLADVELSNWGYEDFNLNLENEQQQGGSISICSFLEN 102
MALE VV+PQ QDPF Y KD+ + L+N D++ +L E+Q+ + I + N
Sbjct: 1 MALETVVFPQ-QDPFTYSYKDNYFNS---LNN----DYD-HLHAEEQENVLLGI---INN 48
Query: 103 QTENYPCVDWSPQSMEVELPHKN-------EQNMSNPSSDASNCNTHNLDXXXXXXXXXX 155
+ +N +W Q E H + +Q ++ P S +
Sbjct: 49 EQQNLHA-NWDHQ---WEYSHSSSPEICTVDQTITAPPSSTME------EATVTASCRRK 98
Query: 156 XXXXXXXXNKEEIENQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAI 215
NKEEIENQRMTHI VERNRRKQ+NEYL+VLRS+MP SYV RGDQASIIGGAI
Sbjct: 99 RRRIKSAKNKEEIENQRMTHITVERNRRKQMNEYLNVLRSLMPSSYVQRGDQASIIGGAI 158
Query: 216 NFVKELEQKLQFLGVQKEKEGKSDVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXXXK 275
NFVKELEQ LQ +G QK+ + ++ + + N+ PF+EFFTFPQY
Sbjct: 159 NFVKELEQHLQSMGGQKKTKEPNENIGL---NNGPPFAEFFTFPQYTTSATQNNNNNNNV 215
Query: 276 GEQLSAVQS----GIADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVT 331
+ Q +ADIEV MV+SHAN+KI SKK P QL+K+V L +RLTILHLNVT
Sbjct: 216 TMEQHNYQEQKQWAVADIEVTMVDSHANMKILSKKKPGQLMKIVVGLQNLRLTILHLNVT 275
Query: 332 TTGEIVLYSISVKVEDDCKLGSVDEIAAAIYQMLDRIQQE 371
T ++VLYS+S+KVE+ +L SVDEIAAA+ ++L +QQE
Sbjct: 276 TVDDMVLYSVSIKVEEGSQLNSVDEIAAAVNRLLRTVQQE 315
>Medtr8g066770.1 | transcription factor | HC |
chr8:27763142-27765450 | 20130731
Length = 312
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 148/217 (68%), Gaps = 18/217 (8%)
Query: 164 NKEEIENQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQ 223
NKEE E QR+THI VERNRRKQ+NE+L+VLRS+MPESYV RGDQASI+GGAI FVKELE
Sbjct: 105 NKEEAETQRITHITVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEH 164
Query: 224 KLQFLG------VQKEKEGKSDVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXXXKGE 277
LQ L VQ+E ++ MAI S PF++FF +PQY +
Sbjct: 165 LLQSLEARKLQLVQQEVTQNNEDMAI----SKPPFAQFFVYPQY--------TWSQTPNK 212
Query: 278 QLSAVQSGIADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGEIV 337
S ++ IADIEV ++E+HANL+I ++ P QL K+V+ + L+ILHLNVTT +V
Sbjct: 213 YTSKTKAAIADIEVTLIETHANLRILTRTRPGQLTKLVAGFQRLFLSILHLNVTTIQPLV 272
Query: 338 LYSISVKVEDDCKLGSVDEIAAAIYQMLDRIQQESNL 374
YSIS KVE+ +LGSVD IA A++ +L RI++E++L
Sbjct: 273 FYSISAKVEEGFQLGSVDGIATAVHHLLGRIEEEASL 309
>Medtr5g064950.1 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr5:27301497-27299044 | 20130731
Length = 300
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 185/335 (55%), Gaps = 44/335 (13%)
Query: 43 MALEAVVYPQPQDPFGYGIKDHNLLADVELSNWGYEDFNLNLENEQQQGGSISICSFLEN 102
MALEAVV+PQ DPF YG L D E + + N
Sbjct: 1 MALEAVVFPQ--DPFTYGC----LTKDEE-----------------------DLFGIISN 31
Query: 103 QTENYPCVDW---SPQSMEVELPHKNEQNMSNPSSDASNCNTHNLDXXXXXXXXXXXXXX 159
++ +W SP +++ + + S+P + +T
Sbjct: 32 NLDHNILSNWDSSSPSNIKEQW-----NSHSSPETSTLPPSTFEATTTITAPRRRKRRHT 86
Query: 160 XXXXNKEEIENQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVK 219
NKEEIE+QRMTHIAVERNRRKQ+NEYL +L+S+MP SYV RGDQASI+GGAINF+K
Sbjct: 87 VNAKNKEEIESQRMTHIAVERNRRKQMNEYLDILKSLMPPSYVQRGDQASIVGGAINFLK 146
Query: 220 ELEQKLQFLGVQKE--KEGKSDVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXXXKGE 277
EL+Q LQF+ QK+ KE + I+ + S++P +EFF FPQY K
Sbjct: 147 ELQQHLQFMKGQKKINKEAHENSF-ISCSCSSQPLTEFFMFPQYSMDARQNITCYPTKHN 205
Query: 278 QLSAVQSGIADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGEIV 337
Q A + DIEV +V+SHAN+KI KK Q++KMV+ + + ILHLNV++ + V
Sbjct: 206 QSRA----MGDIEVTLVDSHANIKIMLKKRQGQVMKMVAGIQNLGFNILHLNVSSMDDNV 261
Query: 338 LYSISVKVEDDCKLGSVDEIAAAIYQMLDRIQQES 372
L S+S KVE+ +L +VDEIAAA+ ++ RIQ E+
Sbjct: 262 LVSVSAKVEEGSRLNTVDEIAAAVNELSHRIQVEA 296
>Medtr5g064950.2 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr5:27301497-27299995 | 20130731
Length = 308
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 170/320 (53%), Gaps = 68/320 (21%)
Query: 43 MALEAVVYPQPQDPFGYGIK---------------DHNLLADVELSNWGYEDFNLNLENE 87
MALEAVV+PQ DPF YG DHN+L SNW + N
Sbjct: 1 MALEAVVFPQ--DPFTYGCLTKDEEDLFGIISNNLDHNIL-----SNWDSS----SPSNI 49
Query: 88 QQQGGSISICSFLENQTENYPCVDWSPQSMEVELPHKNEQNMSNPSSDASNCNTHNLDXX 147
++Q S S SP++ LP + + ++ H ++
Sbjct: 50 KEQWNSHS-----------------SPET--STLPPSTFEATTTITAPRRRKRRHTVNAK 90
Query: 148 XXXXXXXXXXXXXXXXNKEEIENQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQ 207
NKEEIE+QRMTHIAVERNRRKQ+NEYL +L+S+MP SYV RGDQ
Sbjct: 91 ----------------NKEEIESQRMTHIAVERNRRKQMNEYLDILKSLMPPSYVQRGDQ 134
Query: 208 ASIIGGAINFVKELEQKLQFLGVQKE--KEGKSDVMAIANANSNKPFSEFFTFPQYXXXX 265
ASI+GGAINF+KEL+Q LQF+ QK+ KE + I+ + S++P +EFF FPQY
Sbjct: 135 ASIVGGAINFLKELQQHLQFMKGQKKINKEAHENSF-ISCSCSSQPLTEFFMFPQYSMDA 193
Query: 266 XXXXXXXXXKGEQLSAVQSGIADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTI 325
K Q A + DIEV +V+SHAN+KI KK Q++KMV+ + + I
Sbjct: 194 RQNITCYPTKHNQSRA----MGDIEVTLVDSHANIKIMLKKRQGQVMKMVAGIQNLGFNI 249
Query: 326 LHLNVTTTGEIVLYSISVKV 345
LHLNV++ + VL S+S KV
Sbjct: 250 LHLNVSSMDDNVLVSVSAKV 269
>Medtr8g024210.1 | transcription factor | HC | chr8:8874219-8871607
| 20130731
Length = 365
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 134/205 (65%), Gaps = 15/205 (7%)
Query: 164 NKEEIENQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQ 223
NKE++ENQRMTHIAVERNRR+Q+N++LSVLRS+MP SYV RGDQASIIGGAI+FVKELEQ
Sbjct: 172 NKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPSSYVQRGDQASIIGGAIDFVKELEQ 231
Query: 224 KLQFLGVQKEKEGKSDVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXXXKGEQLSAVQ 283
L+ L QK + D F + + E + +
Sbjct: 232 LLESLEAQKRIKKNED---------------FGSSSSSSPPSYGMKLSPYEENEVKAENK 276
Query: 284 SGIADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGEIVLYSISV 343
S ADI+V ++++H NLKI KK QL+K++ +L +RLTILHLN+T+ VLYS ++
Sbjct: 277 SEAADIKVTLIQTHVNLKIECKKKAGQLIKVIVALENLRLTILHLNITSFESSVLYSFNL 336
Query: 344 KVEDDCKLGSVDEIAAAIYQMLDRI 368
K+E+DCKLG+ ++IA A++Q+ I
Sbjct: 337 KIEEDCKLGTANDIAEAVHQIFSYI 361
>Medtr0194s0050.1 | transcription factor | HC |
scaffold0194:25693-27314 | 20130731
Length = 387
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 137/215 (63%), Gaps = 10/215 (4%)
Query: 166 EEIENQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKL 225
EE+E+QRMTHIAVERNRRKQ+NE+L VLRS+MP SYV RGDQASIIGGAI FV+ELEQ L
Sbjct: 177 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLL 236
Query: 226 QFLGVQKEK----EGKSDVMAIANANSNKPFSEFF--TFPQYXXXXXXXXXXXXXKGEQL 279
Q L QK + E +S + ++ S + FF T P E+
Sbjct: 237 QCLESQKRRRLLGEAQSKQVGDSSLASTQQQPPFFPATLPNDQMKLVEMETGLQ---EET 293
Query: 280 SAVQSGIADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGEIVLY 339
+ +S +AD+EV ++ A +KI S++ P QL+K +++L M+L ILH N+TT + VLY
Sbjct: 294 AESKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDMQLIILHTNITTIEQTVLY 353
Query: 340 SISVKVEDDCKLGSVDEIAAAIYQMLDRIQQESNL 374
S +VKV D + + ++IA+++ Q+L I +++
Sbjct: 354 SFNVKVASDTRF-TAEDIASSVQQILSFIHANTSM 387
>Medtr2g022280.1 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr2:7685904-7683445 | 20130731
Length = 195
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 111/191 (58%), Gaps = 8/191 (4%)
Query: 173 MTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLGVQK 232
M+HIAVERNRR+Q+NE+L VLRS+ P Y+ RGDQASIIGG I F+ EL Q LQ L QK
Sbjct: 1 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFINELHQVLQALESQK 60
Query: 233 EKEGKSDVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXXXKGEQLSAVQSGIADIEVI 292
++ + + +P T Q+ K E ++ S IAD+EV
Sbjct: 61 RRK-SLSPSPGPSPKTLQP-----TLHQFDISSGGIGTNNAFK-ELGASCNSSIADVEVK 113
Query: 293 MVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGEIVLYSISVKVEDDCKLG 352
+ + LK+ S++ P Q+ ++++ L + +LHLN+++ E VLY VK+E C+L
Sbjct: 114 ISGPNVILKVISQRIPGQVSRIITVLESLSFEVLHLNISSMEETVLYQFVVKIELGCQL- 172
Query: 353 SVDEIAAAIYQ 363
S++E+A + Q
Sbjct: 173 SLEELAMEVQQ 183
>Medtr1g028470.1 | basic helix loop helix (BHLH) DNA-binding family
protein | HC | chr1:9631278-9629472 | 20130731
Length = 293
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 111/210 (52%), Gaps = 17/210 (8%)
Query: 171 QRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLGV 230
RM+HI VERNRRKQ+NE LS+L+S+MP YV RGDQASI+ I+++ EL Q LQ L
Sbjct: 85 HRMSHITVERNRRKQMNEQLSILKSLMPCFYVKRGDQASIVESVIDYINELHQLLQCLES 144
Query: 231 QKEKEGKSDVMAIANANSNK----PFSEFFTFPQYXXXXXXXXXXXXXKGEQLSAVQSGI 286
+K+++ ++V + + P S T Q+ S++ I
Sbjct: 145 KKQRKVYNEVPSPRPLPPSPRIIFPISP-RTPSQWLQQCGGYLSSEPSPTSSASSINDNI 203
Query: 287 -----------ADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGE 335
AD+EV SH LK S + P Q L+++S L +RL I+H+ V T E
Sbjct: 204 NELVGNSTSLVADVEVKFCGSHVLLKTVSSRIPGQALRIMSVLEDLRLEIVHVRVNTADE 263
Query: 336 IVLYSISVKVEDDCKLGSVDEIAAAIYQML 365
+LY ++K+ +C+L S +E+A I Q
Sbjct: 264 TMLYLFTIKIGIECQL-SAEELAQQIQQTF 292
>Medtr3g090850.1 | transcription factor | HC |
chr3:41256456-41258644 | 20130731
Length = 329
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 116/230 (50%), Gaps = 39/230 (16%)
Query: 171 QRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLGV 230
QR++HI VERNRRKQ+NE+LSVLRS+MP YV RGDQASIIGG ++++ EL+Q LQ L
Sbjct: 99 QRVSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYITELQQLLQALEA 158
Query: 231 QKEKEGKSDVMA---------IANANSNKPFSEFFTFPQYXXXXXXXXXXXXXKGEQ--- 278
+K+++ S+V++ + P S P + +Q
Sbjct: 159 KKQRKVYSEVLSPRLVPSPRPSPLSPRKPPLSPRLNLP-ISPRTPQPTSPYKPRMQQSYI 217
Query: 279 -LSAVQSGIADIEVIMVESHAN-LKIRSK--------KF--PKQLLKMVS---------- 316
LS + V + N L SK KF P LLK VS
Sbjct: 218 ALSPLDPSPTSSSTSSVNDNINELVANSKSPIADVEVKFSGPHVLLKTVSQRIPGQPLKI 277
Query: 317 --SLHGMRLTILHLNV-TTTGEIVLYSISVKVEDDCKLGSVDEIAAAIYQ 363
+L + L ILH+N+ +T+ + +L S ++K+ +C+L S +E+A I Q
Sbjct: 278 ISALEDLALEILHVNINSTSDDTMLNSFTIKIGIECQL-SAEELAQQIQQ 326
>Medtr8g024790.1 | basic helix loop helix (bHLH) family
transcription factor | HC | chr8:9214341-9212700 |
20130731
Length = 464
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 87/179 (48%), Gaps = 25/179 (13%)
Query: 173 MTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLGVQK 232
M H+ ER RR++LN LRS++P V + D+AS++ A++++ EL+ K++ L +
Sbjct: 290 MNHVEAERQRREKLNHRFYALRSVVPN--VSKMDKASLLSDAVDYINELKSKIEDLESVQ 347
Query: 233 EKEGKS---DVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXXXKGEQLSAVQSGIADI 289
+KE K + M I + NS S +Q +I
Sbjct: 348 QKESKKVKMETMEIVDNNSATTTSTVV--------------------DQKRPCNVNAFEI 387
Query: 290 EVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGEIVLYSISVKVEDD 348
+V ++ + A ++++S+ +++S L + + H +++T E+++ + V++ ++
Sbjct: 388 DVKIIGNDAMVRVQSENVNHPGARLMSVLKDLEFQVHHASISTVNEVMVQDVVVRIPNE 446
>Medtr1g072320.1 | bHLH transcription factor | HC |
chr1:32103626-32096191 | 20130731
Length = 656
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 97/200 (48%), Gaps = 27/200 (13%)
Query: 175 HIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFL-----G 229
H+ ER RR++LNE +LRS++P +V + D+ASI+G I ++K+L +K+Q L
Sbjct: 471 HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYLKQLRRKIQDLETRNRQ 528
Query: 230 VQKEKEGKSDVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXXXKGEQLSAVQSG-IAD 288
++ E++ +S V + K + AV++ ++
Sbjct: 529 IETEQQSRSGVTVLVGPTDKK----------------KVRIVEECGATRAKAVETEVVSS 572
Query: 289 IEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGEIVLYSISVKVEDD 348
++V ++ES A L+I LL ++ L +R+ ++ + + + + + KV+++
Sbjct: 573 VQVSIIESDALLEIECLHREGLLLDVMVMLRELRIEVIGVQSSLNNGVFVAELRAKVKEN 632
Query: 349 CKLG---SVDEIAAAIYQML 365
G S+ E+ A+ Q++
Sbjct: 633 GGNGKKVSIVEVKRALNQII 652
>Medtr8g024770.1 | basic helix loop helix (bHLH) family
transcription factor | LC | chr8:9193947-9195311 |
20130731
Length = 454
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 173 MTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLGVQK 232
M H+ ER RR++LN LRS++P V + D+AS++ A++++ EL+ K++ L + +
Sbjct: 278 MNHVEAERQRREKLNHRFYALRSVVPN--VSKMDKASLLSDAVDYINELKAKIEDLKLGQ 335
Query: 233 EKEGKSDVM 241
+KE K +M
Sbjct: 336 QKESKKAMM 344
>Medtr1g112680.1 | transcription factor aborted microspores-like
protein | HC | chr1:51008905-51011549 | 20130731
Length = 521
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 87/176 (49%), Gaps = 18/176 (10%)
Query: 175 HIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLGVQKEK 234
++ ER RRK+LN+ L LRS++P + + D+ASI+G AI FVK+L+++++ L + E+
Sbjct: 318 NLVAERKRRKKLNDRLYNLRSLVPR--ISKLDRASILGDAIEFVKDLQKQVKELQDELEE 375
Query: 235 EGKS----------DVMAIANANSNKPFSE--FFTFPQYXXXXXXXXXXXXXKGEQLSAV 282
++ V AN N+N +E F Y +Q +
Sbjct: 376 NSETGTESNCVYVDGVQVKANNNNNVTKAEHGFHVGNGYVSKQKQEDVGTVVTDKQTQQM 435
Query: 283 QSGIADIEVIMVESHAN-LKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGEIV 337
+ A +EV ++ + +K+ + P +K++ + + + + ++H VT+ +V
Sbjct: 436 E---AQVEVAQIDGNEYFVKVFCEHRPGGFVKLMDAFNTLGMDVMHATVTSHKGLV 488
>Medtr2g104530.1 | helix loop helix DNA-binding domain protein | LC
| chr2:45112271-45114015 | 20130731
Length = 280
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 169 ENQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFL 228
+++ + H ER RR +L + L +I+P S + D+ASI+ GAIN+V++L++++ L
Sbjct: 100 KSKTLFHTLAERRRRLELAHKFTELSAIIPRS--KKTDKASIVQGAINYVEKLQKRVMEL 157
Query: 229 GVQKEKEGKSDVMAIANANS 248
VQ+ K GK ++ + NS
Sbjct: 158 EVQQNKRGKEPIILLNKENS 177
>Medtr7g117670.1 | ABA-inducible bHLH-type transcription factor | HC
| chr7:48837262-48834876 | 20130731
Length = 574
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 173 MTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLGVQK 232
+ H+ ER RR++LN+ LR+++P + + D+AS++G AI ++ EL+ KL+ + ++
Sbjct: 401 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAIAYINELQAKLKIMESER 458
Query: 233 EKEGKSDVM-AIANANS 248
E G S +AN+ S
Sbjct: 459 ESFGSSTSRDGLANSRS 475
>Medtr5g030430.1 | basic helix loop helix (bHLH) family
transcription factor | HC | chr5:12884262-12887061 |
20130731
Length = 677
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 102/203 (50%), Gaps = 23/203 (11%)
Query: 173 MTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFL---- 228
+ H+ ER RR++LN+ LR+++P V + D+AS++G AI+++ EL+ KLQ
Sbjct: 492 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAISYITELKTKLQKTESDK 549
Query: 229 -GVQKEKEGKSDVMAIANANSNKPFSEFFTFPQYXXXXXXXXXXXXXKGEQLSAVQSGI- 286
G++K+ +G + + N N + + Q + S+ Q+ I
Sbjct: 550 DGLEKQLDGMKNEIQKINENQSHQPPQQQQQQQPIP-------------NKPSSNQALID 596
Query: 287 ADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGEIVLYSISVKVE 346
DI+V ++ A ++++ K +++++L + L + H +V+ ++++ +VK+
Sbjct: 597 LDIDVKIIGWDAMIRVQCSKKNHPAARLMAALMELDLEVHHASVSVVNDLMIQQATVKM- 655
Query: 347 DDCKLGSVDEIAAAIYQMLDRIQ 369
+ + +++ AA+ + +Q
Sbjct: 656 -GSRFYTQEQLRAALSSKVGDVQ 677
>Medtr8g098275.2 | bHLH transcription factor | HC |
chr8:41000355-41004473 | 20130731
Length = 508
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 170 NQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLG 229
++ M H+ ER RR +LNE LRS++P + + D+ SI+ AI ++++LE+K++ L
Sbjct: 304 DEGMNHVLSERRRRAKLNERFLTLRSMVPSN--SKDDKVSILDDAIEYLRKLEKKIRELE 361
Query: 230 VQKEKEG 236
Q+E G
Sbjct: 362 AQREPTG 368
>Medtr8g098275.3 | bHLH transcription factor | HC |
chr8:41001796-41004842 | 20130731
Length = 444
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 173 MTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLGVQK 232
M H+ ER RR +LNE LRS++P + + D+ SI+ AI ++++LE+K++ L Q+
Sbjct: 243 MNHVLSERRRRAKLNERFLTLRSMVPSN--SKDDKVSILDDAIEYLRKLEKKIRELEAQR 300
Query: 233 EKEG 236
E G
Sbjct: 301 EPTG 304
>Medtr8g098275.1 | bHLH transcription factor | HC |
chr8:41000594-41004473 | 20130731
Length = 601
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 170 NQRMTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLG 229
++ M H+ ER RR +LNE LRS++P + + D+ SI+ AI ++++LE+K++ L
Sbjct: 397 DEGMNHVLSERRRRAKLNERFLTLRSMVPSN--SKDDKVSILDDAIEYLRKLEKKIRELE 454
Query: 230 VQKEKEG 236
Q+E G
Sbjct: 455 AQREPTG 461
>Medtr8g067280.1 | basic helix loop helix (bHLH) family
transcription factor | HC | chr8:28079487-28082002 |
20130731
Length = 648
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 173 MTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFL 228
+ H+ ER RR++LN+ LR+++P V + D+AS++G AI+++ EL+ KLQ L
Sbjct: 461 LNHVEAERQRREKLNQKFYALRAVVPN--VSKMDKASLLGDAISYINELKSKLQGL 514
>Medtr8g027495.1 | ABA-inducible bHLH-type transcription factor | HC
| chr8:9802803-9805726 | 20130731
Length = 623
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 173 MTHIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLGVQK 232
+ H+ ER RR++LN+ LR+++P + + D+AS++G AI ++ EL+ KL+ + ++
Sbjct: 457 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAIAYINELQAKLKTMESER 514
Query: 233 EKEG 236
E+ G
Sbjct: 515 EQLG 518
>Medtr5g014600.1 | basic helix loop helix (bHLH) DNA-binding family
protein | HC | chr5:4932337-4934396 | 20130731
Length = 334
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 101/204 (49%), Gaps = 33/204 (16%)
Query: 175 HIAVERNRRKQLNEYLSVLRSIMPESYVPRGDQASIIGGAINFVKELEQKLQFLGVQKEK 234
HI ER RR+++++ L +++P+ + + D+AS++G AIN VK+L++K++ L +EK
Sbjct: 150 HIIAERKRREKISQKFIALSALLPD--LKKMDKASVLGDAINHVKQLQEKVKLL---EEK 204
Query: 235 EGKSDVMAIA--------NANSNKPFSEFFTFPQYXXXXXXXXXXXXXKGEQLSAVQSGI 286
K++V +++ + +S++ SE + Y S +
Sbjct: 205 NQKNNVESVSMVYVEKTKSYSSDEDVSETSSNSGYGNCCHT----------HTSKPSRSL 254
Query: 287 ADIEVIMVESHANLKIRSKKFPKQLLKMVSSLHGMRLTILHLNVTTTGEIVLYS----IS 342
++E + E + +++ +K L+ ++ + LHL+VT++ ++ + I+
Sbjct: 255 PEVEARVSEKNVLIRVHCEKHKGALMNIIQEIEN-----LHLSVTSSSALLFGTTKLDIT 309
Query: 343 VKVEDDCKLG-SVDEIAAAIYQML 365
+ E D K SV E+A + +L
Sbjct: 310 IIAEMDEKFSLSVQELARKLRVVL 333