Miyakogusa Predicted Gene
- Lj1g3v4931730.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4931730.2 Non Characterized Hit- tr|I1HIT8|I1HIT8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,38.46,1e-17,seg,NULL; UNCHARACTERIZED,NULL,CUFF.34042.2
(153 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g113620.1 | integral membrane Yip1-family protein | HC | c... 246 6e-66
Medtr5g081040.1 | integral membrane Yip1 family protein | HC | c... 84 7e-17
Medtr5g081040.2 | integral membrane Yip1 family protein | HC | c... 73 1e-13
Medtr3g069170.1 | integral membrane Yip1 family protein | HC | c... 71 3e-13
Medtr3g069150.1 | integral membrane Yip1 family protein | HC | c... 71 4e-13
Medtr3g069150.2 | integral membrane Yip1 family protein | HC | c... 70 6e-13
>Medtr7g113620.1 | integral membrane Yip1-family protein | HC |
chr7:46824162-46828047 | 20130731
Length = 282
Score = 246 bits (628), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 117/150 (78%), Positives = 128/150 (85%)
Query: 4 GKYTSIDNQQLQGSXXXXXXXXXXXXKFTDSNLKTFPPSETQGKITGGSRPPRDADDSFS 63
GKYT+ID+QQLQGS KFTDSNL+TFPPS+ QGKITGGSRPPRDADDSFS
Sbjct: 6 GKYTTIDSQQLQGSVPAVPDPPPVTVKFTDSNLQTFPPSQAQGKITGGSRPPRDADDSFS 65
Query: 64 KPVSGSDEPQQQGGWLHTFTVAAYKPYFDIDSSDVLERIKDSLFPFRGTFNEKTATNPDL 123
KP SGS + QQGGWL F +A YKPYFD+D+SDVLERI DSLFPFRGTFNEKT+TNPDL
Sbjct: 66 KPASGSSDEPQQGGWLRNFAIATYKPYFDVDTSDVLERIIDSLFPFRGTFNEKTSTNPDL 125
Query: 124 YGPFWICTTLIFVAASIGTFVTYLAHKLKD 153
YGPFWICTTLIFVAAS+GTFVTY+AHKLKD
Sbjct: 126 YGPFWICTTLIFVAASMGTFVTYVAHKLKD 155
>Medtr5g081040.1 | integral membrane Yip1 family protein | HC |
chr5:34691866-34687538 | 20130731
Length = 273
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 3 SGKYTSIDNQQLQGSXXXXXXXXXXXXKFTD--SNLKTFPPSETQG-KITGGSRPPRDAD 59
S YT + L GS K D +N++ FPP+ G + GG +
Sbjct: 4 SSSYTGLPTSHLLGSVPAVIVEGEKTTKHVDPEANMQIFPPAANGGDRGRGGYQTVGTPT 63
Query: 60 DSFSKPVSGSDEPQQQGGWLHTFTVAAYKPYFDIDSSDVLERIKDSLFPFRGTFNEKTAT 119
++F E Q W F+V++Y YFD+D+ V+ R+ S P G F K
Sbjct: 64 EAF--------EQQPTNNWRGFFSVSSYSQYFDVDTDAVMTRLISSFNPVGGDFFSKIDA 115
Query: 120 NPDLYGPFWICTTLIFVAASIGTFVTYLAHKLKD 153
NPDLYG WI TTL+FV AS+G T+L + D
Sbjct: 116 NPDLYGLIWISTTLVFVLASLGNLATFLMQQHAD 149
>Medtr5g081040.2 | integral membrane Yip1 family protein | HC |
chr5:34689043-34687538 | 20130731
Length = 213
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%)
Query: 71 EPQQQGGWLHTFTVAAYKPYFDIDSSDVLERIKDSLFPFRGTFNEKTATNPDLYGPFWIC 130
E Q W F+V++Y YFD+D+ V+ R+ S P G F K NPDLYG WI
Sbjct: 7 EQQPTNNWRGFFSVSSYSQYFDVDTDAVMTRLISSFNPVGGDFFSKIDANPDLYGLIWIS 66
Query: 131 TTLIFVAASIGTFVTYLAHKLKD 153
TTL+FV AS+G T+L + D
Sbjct: 67 TTLVFVLASLGNLATFLMQQHAD 89
>Medtr3g069170.1 | integral membrane Yip1 family protein | HC |
chr3:30968415-30965098 | 20130731
Length = 248
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 34 SNLKTFPPSETQGKITGGS--RPPRDADDSFSKPVSGSDEPQQQGGWLHTFTVAAYKPYF 91
+N++TFPP+ G G + D+F + Q W F+V++Y YF
Sbjct: 37 ANMQTFPPNSGGGGGGGQQGYQTLGTPTDAFGQ--------QPANNWQGFFSVSSYTQYF 88
Query: 92 DIDSSDVLERIKDSLFPFRGTFNEKTATNPDLYGPFWICTTLIFVAASIGTFVTYLAHK 150
++D+ V+ R+ SL P F K NPDLYG WI TTL+FV A +G F TYL K
Sbjct: 89 NVDTDVVVNRLISSLNPVGDDFFAKIDANPDLYGLIWISTTLVFVLALLGNFATYLMEK 147
>Medtr3g069150.1 | integral membrane Yip1 family protein | HC |
chr3:30952603-30949049 | 20130731
Length = 273
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 34 SNLKTFPPSETQGKITGGS--RPPRDADDSFSKPVSGSDEPQQQGGWLHTFTVAAYKPYF 91
+N++TFPP+ G G + D+F + Q W F+V++Y YF
Sbjct: 37 ANMQTFPPNSGGGGGGGQQGYQTLGTPTDAFGQ--------QPANNWQGFFSVSSYTQYF 88
Query: 92 DIDSSDVLERIKDSLFPFRGTFNEKTATNPDLYGPFWICTTLIFVAASIGTFVTYLAHK 150
++D+ V+ R+ SL P F K NPDLYG WI TTL+FV A +G F TYL K
Sbjct: 89 NVDTDVVVNRLISSLNPVGDDFFAKIDANPDLYGLIWISTTLVFVLALLGNFATYLMEK 147
>Medtr3g069150.2 | integral membrane Yip1 family protein | HC |
chr3:30952603-30949049 | 20130731
Length = 258
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 34 SNLKTFPPSETQGKITGGS--RPPRDADDSFSKPVSGSDEPQQQGGWLHTFTVAAYKPYF 91
+N++TFPP+ G G + D+F + Q W F+V++Y YF
Sbjct: 37 ANMQTFPPNSGGGGGGGQQGYQTLGTPTDAFGQ--------QPANNWQGFFSVSSYTQYF 88
Query: 92 DIDSSDVLERIKDSLFPFRGTFNEKTATNPDLYGPFWICTTLIFVAASIGTFVTYLAHK 150
++D+ V+ R+ SL P F K NPDLYG WI TTL+FV A +G F TYL K
Sbjct: 89 NVDTDVVVNRLISSLNPVGDDFFAKIDANPDLYGLIWISTTLVFVLALLGNFATYLMEK 147