Miyakogusa Predicted Gene

Lj1g3v4921060.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4921060.3 tr|A2Q336|A2Q336_MEDTR Peptidase S1 and S6,
chymotrypsin/Hap OS=Medicago truncatula GN=MTR_7g113170
,58.13,0,Trypsin-like serine proteases,Peptidase cysteine/serine,
trypsin-like; PROTEASES2C,Peptidase S1C, Hr,CUFF.33633.3
         (284 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g113170.2 | trypsin-like serine protease | HC | chr7:46585...   330   9e-91
Medtr7g113170.1 | trypsin-like serine protease | HC | chr7:46585...   330   1e-90
Medtr6g007030.1 | trypsin-like serine protease | HC | chr6:13500...   103   2e-22
Medtr2g019140.1 | protease Do-like protein | HC | chr2:6181839-6...    83   3e-16
Medtr6g011810.1 | trypsin-like serine protease | HC | chr6:35243...    79   5e-15
Medtr5g464730.1 | PDZ domain protein | HC | chr5:26886308-268818...    58   1e-08
Medtr2g019140.2 | protease Do-like protein | HC | chr2:6181836-6...    50   2e-06
Medtr1g088980.1 | DegP protease | HC | chr1:39969497-39960538 | ...    49   4e-06

>Medtr7g113170.2 | trypsin-like serine protease | HC |
           chr7:46585203-46589490 | 20130731
          Length = 380

 Score =  330 bits (846), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 172/238 (72%), Positives = 186/238 (78%), Gaps = 9/238 (3%)

Query: 44  KEASGAVLDDLSKAAAACGPFGRDTIANAAAKVGPAVVHFEFPQYFLGSHVGSRICSGTI 103
           KE SG V +D SK +     FGRDTIANAAAKVGPAVV+   PQ F G   G  I SGTI
Sbjct: 95  KETSGGV-NDESKPSKVT--FGRDTIANAAAKVGPAVVNISIPQDFYGFATGKSIGSGTI 151

Query: 104 IDKDGTILTCAHAVVS------SSKGKIEVTLQDGRTFEGKVVNADTESDIAIVKINSET 157
           I+KDGTILTCAH VV       SSKGKIEVTLQDGRTFEGKVVNAD  SDIA+VKINSET
Sbjct: 152 INKDGTILTCAHVVVDFHGTKGSSKGKIEVTLQDGRTFEGKVVNADMHSDIAVVKINSET 211

Query: 158 PLPEAKLGSSSRLRPGDWVIAIGSPHFLQNTVTAGILSCVNRKSRDLGMSGMPREYLQAD 217
           PLPEAKLGSS+ LRPGDWVIA+G PH LQNTVTAGI+SCV+RKS DLG SG PREYLQ D
Sbjct: 212 PLPEAKLGSSTMLRPGDWVIAMGCPHSLQNTVTAGIVSCVDRKSSDLGFSGSPREYLQTD 271

Query: 218 CTTSRGNSGGPLVNMDGEVVGVNIMKAKDVDGFSFSIPIDSVDKVIEHLKKRGSMERP 275
           C  + GNSGGPLVNMDGE+VGVNIMK    DG  FS+PIDSV K+IEH KK G + RP
Sbjct: 272 CAINVGNSGGPLVNMDGEIVGVNIMKVLAADGLGFSVPIDSVCKIIEHFKKSGRVIRP 329


>Medtr7g113170.1 | trypsin-like serine protease | HC |
           chr7:46585203-46590419 | 20130731
          Length = 433

 Score =  330 bits (846), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 175/254 (68%), Positives = 192/254 (75%), Gaps = 9/254 (3%)

Query: 28  TLVYSKSSNIIHSTSCKEASGAVLDDLSKAAAACGPFGRDTIANAAAKVGPAVVHFEFPQ 87
           TL   + + +  S   KE SG V +D SK +     FGRDTIANAAAKVGPAVV+   PQ
Sbjct: 79  TLSSYRVNPVPSSDISKETSGGV-NDESKPSKVT--FGRDTIANAAAKVGPAVVNISIPQ 135

Query: 88  YFLGSHVGSRICSGTIIDKDGTILTCAHAVVS------SSKGKIEVTLQDGRTFEGKVVN 141
            F G   G  I SGTII+KDGTILTCAH VV       SSKGKIEVTLQDGRTFEGKVVN
Sbjct: 136 DFYGFATGKSIGSGTIINKDGTILTCAHVVVDFHGTKGSSKGKIEVTLQDGRTFEGKVVN 195

Query: 142 ADTESDIAIVKINSETPLPEAKLGSSSRLRPGDWVIAIGSPHFLQNTVTAGILSCVNRKS 201
           AD  SDIA+VKINSETPLPEAKLGSS+ LRPGDWVIA+G PH LQNTVTAGI+SCV+RKS
Sbjct: 196 ADMHSDIAVVKINSETPLPEAKLGSSTMLRPGDWVIAMGCPHSLQNTVTAGIVSCVDRKS 255

Query: 202 RDLGMSGMPREYLQADCTTSRGNSGGPLVNMDGEVVGVNIMKAKDVDGFSFSIPIDSVDK 261
            DLG SG PREYLQ DC  + GNSGGPLVNMDGE+VGVNIMK    DG  FS+PIDSV K
Sbjct: 256 SDLGFSGSPREYLQTDCAINVGNSGGPLVNMDGEIVGVNIMKVLAADGLGFSVPIDSVCK 315

Query: 262 VIEHLKKRGSMERP 275
           +IEH KK G + RP
Sbjct: 316 IIEHFKKSGRVIRP 329


>Medtr6g007030.1 | trypsin-like serine protease | HC |
           chr6:1350091-1343643 | 20130731
          Length = 432

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 107/184 (58%), Gaps = 14/184 (7%)

Query: 100 SGTIIDKDGTILTCAHAVVSSSKGKIEVTLQDGRTFEGKVVNADTESDIAIVKINSET-- 157
           SG + DKDG I+T  H +  +S   + VTL D  T++ KVV  D + D+A++++++    
Sbjct: 151 SGFVWDKDGHIVTNYHVIRGASD--LRVTLADQSTYDAKVVGFDQDKDVAVLRVDAPKDK 208

Query: 158 --PLPEAKLGSSSRLRPGDWVIAIGSPHFLQNTVTAGILSCVNRKSRDLGMSGMP-REYL 214
             P+P   +G S+ L  G  V AIG+P  L +T+T G++S + R+      +G P ++ +
Sbjct: 209 LRPIP---VGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISS-AATGRPIQDVI 264

Query: 215 QADCTTSRGNSGGPLVNMDGEVVGVNIM---KAKDVDGFSFSIPIDSVDKVIEHLKKRGS 271
           Q D   + GNSGGPL++  G ++G+N      +    G  FSIP+D+V+ +++ L K G 
Sbjct: 265 QTDAAINPGNSGGPLLDSSGNLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGK 324

Query: 272 MERP 275
           + RP
Sbjct: 325 VTRP 328


>Medtr2g019140.1 | protease Do-like protein | HC |
           chr2:6181839-6175380 | 20130731
          Length = 325

 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 16/187 (8%)

Query: 100 SGTIIDKDGTILTCAHAVV-----SSSKGKIEVTLQD--GRTF--EGKVVNADTESDIAI 150
           SG I DK G I+T  H V      +S   + +V L D  G  F  EGK++  D   D+A+
Sbjct: 134 SGFIWDKFGHIVTNYHVVAKLATDTSGLQRCKVFLVDAKGNNFSREGKIIGFDPSYDLAV 193

Query: 151 VKINSE-TPLPEAKLGSSSRLRPGDWVIAIGSPHFLQNTVTAGILSCVNRKSRDLGMSGM 209
           +K++ +   L    +G S  L  G    AIG+P+  +NT+T G++S + R+       G 
Sbjct: 194 LKVDVDGYELKPVVIGESKNLHVGQSCFAIGNPYGYENTLTTGVVSGLGREIPSPN-GGA 252

Query: 210 PREYLQADCTTSRGNSGGPLVNMDGEVVGVNIMK-----AKDVDGFSFSIPIDSVDKVIE 264
            +  +Q D   + GNSGGPL++  G VVGVN             G +F+IPID+V + + 
Sbjct: 253 IKGAIQTDAAINAGNSGGPLIDSHGHVVGVNTATFTRKGTGASSGVNFAIPIDAVLRSVP 312

Query: 265 HLKKRGS 271
           +L   G+
Sbjct: 313 YLIVYGT 319


>Medtr6g011810.1 | trypsin-like serine protease | HC |
           chr6:3524383-3530604 | 20130731
          Length = 458

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 22/193 (11%)

Query: 100 SGTIIDKDGTILTCAHAVVSS-----SKG----KIEVTLQDG--RTFEGKVVNADTESDI 148
           SG + D++G I+T  H + ++     S G    +I +   +G  + FEG ++ AD   D+
Sbjct: 166 SGVVWDEEGHIVTNYHVIGNALSRNPSSGQVVARINILASEGVIKNFEGILIGADRLKDL 225

Query: 149 AIVKINS-ETPLPEAKLGSSSRLRPGDWVIAIGSPHFLQNTVTAGILSCVNR---KSRDL 204
           A++K+++ +  L    +G SS L+ G   +AIG+P    +T+T G++S +NR       +
Sbjct: 226 AVLKVDAPKEILKPINVGESSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSKTGV 285

Query: 205 GMSGMPREYLQADCTTSRGNSGGPLVNMDGEVVGVN---IMKAKDVDGFSFSIPIDSVDK 261
            + G     +Q D   + GNSGGPL+N  G ++G+N     +     G  F+IP  +V +
Sbjct: 286 TIGG----GIQTDAAINPGNSGGPLLNSKGSLIGINAAIFTQTGTSAGVGFAIPSSTVRR 341

Query: 262 VIEHLKKRGSMER 274
           ++  L + G + R
Sbjct: 342 IVPQLIQFGKVVR 354


>Medtr5g464730.1 | PDZ domain protein | HC | chr5:26886308-26881841
           | 20130731
          Length = 372

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 60/222 (27%)

Query: 99  CSGTIIDKDGTILTCAHAVVSSS--------KG----------KIEVTLQDGRTFEGKVV 140
           CSG I++ D      AH V++S+        KG          K+ V L DG ++ G+V 
Sbjct: 53  CSGVIVENDAN---NAHIVLTSANLLRRPREKGLLDDTLADSLKVIVYLYDGGSYVGEVC 109

Query: 141 NADTESDIAIVKINSETPLPEAKL----------------------GSSSRLRPGDWVIA 178
             D   +IA ++  S+  LP A L                       S   L PG  ++A
Sbjct: 110 AYDFHFNIAWIRFQSDISLPTAILRQVDDYINVNPAQDNSFPLHPHSSHFNLVPGLPIVA 169

Query: 179 IG----SPHFLQNTVTAGILSCVNRKSRDLGMSGMPREYLQADCTTSRGNSGGPLVNMDG 234
           +G     P  L       IL   +   ++L M           C T+    GG LVN+ G
Sbjct: 170 VGRYFAKPFDLMAAPGQFILDRCDLDCKELFMGS---------CKTTSCGEGGALVNLSG 220

Query: 235 EVVGVNIMKAKDVDGFSFS-IPIDSVDKVIEHLKKRGSMERP 275
           EV+G+         GF+   +PI+   K  EH K+ G + RP
Sbjct: 221 EVIGITFYYDY---GFTTPFMPINIARKSWEHYKRYGGLRRP 259


>Medtr2g019140.2 | protease Do-like protein | HC |
           chr2:6181836-6175380 | 20130731
          Length = 247

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 100 SGTIIDKDGTILTCAHAVV-----SSSKGKIEVTLQD--GRTF--EGKVVNADTESDIAI 150
           SG I DK G I+T  H V      +S   + +V L D  G  F  EGK++  D   D+A+
Sbjct: 134 SGFIWDKFGHIVTNYHVVAKLATDTSGLQRCKVFLVDAKGNNFSREGKIIGFDPSYDLAV 193

Query: 151 VKINSE-TPLPEAKLGSSSRLRPGDWVIAIGSPHFLQNTVTAGILSC 196
           +K++ +   L    +G S  L  G    AIG+P+  +NT+T G++S 
Sbjct: 194 LKVDVDGYELKPVVIGESKNLHVGQSCFAIGNPYGYENTLTTGVISL 240


>Medtr1g088980.1 | DegP protease | HC | chr1:39969497-39960538 |
           20130731
          Length = 596

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 19/171 (11%)

Query: 110 ILTCAHAVVSSSKGKIEVTLQDGRTFEGKVVNADTESDIAIVKINSET------PLPEAK 163
           +LT AH V   ++ K++    D + +  KV+      D+A++ + SE       PL   +
Sbjct: 141 LLTNAHCVEHDTQVKVKRRGDDSK-YVAKVLARAAGCDLALLSVESEEFWRDVEPL---R 196

Query: 164 LGSSSRLRPGDWVIAIGSPHFLQNT--VTAGILSCVNRKSRDLGMSGMPREYLQADCTTS 221
            G    L+  D V  +G P F  +T  VT G++S V   S   G S +    +Q D   +
Sbjct: 197 FGHLPHLQ--DSVTVVGYP-FGGDTISVTKGVVSRVEVTSYAHGSSELLG--IQIDAAIN 251

Query: 222 RGNSGGPLVNMDGEVVGV--NIMKAKDVDGFSFSIPIDSVDKVIEHLKKRG 270
            GNSGGP  N  GE +GV   + +++D +   + IP   V   +   +K G
Sbjct: 252 PGNSGGPAFNDQGECIGVAFQVYRSEDAENIGYVIPSTVVSHFLTDYEKNG 302