Miyakogusa Predicted Gene

Lj1g3v4916370.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4916370.2 Non Characterized Hit- tr|I1JQI6|I1JQI6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18502
PE,84.13,0,RF_PROK_I,Peptide chain release factor class I/class II;
prfA: peptide chain release factor 1,Peptid,CUFF.34580.2
         (413 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g108300.1 | peptide chain release factor 1 | HC | chr7:440...   601   e-172
Medtr7g110570.1 | peptide chain release factor 1 | HC | chr7:453...   201   1e-51
Medtr7g110570.2 | peptide chain release factor 1 | HC | chr7:453...   199   4e-51
Medtr7g080430.1 | peptide chain release factor 2 | HC | chr7:305...   129   4e-30
Medtr7g112100.1 | peptide chain release factor 2 | HC | chr7:460...   118   1e-26
Medtr1g041890.1 | peptide chain release factor, putative | HC | ...    79   9e-15

>Medtr7g108300.1 | peptide chain release factor 1 | HC |
           chr7:44051484-44058335 | 20130731
          Length = 416

 Score =  601 bits (1550), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 295/415 (71%), Positives = 331/415 (79%), Gaps = 3/415 (0%)

Query: 1   MASLTASFTARTWS---DLAPLRRRSLHPFINRRVTLAPTLTPLRIVCMAEPYLITKLDS 57
           M SLTASFTAR +    D+  LR RS+H F NRRVTL PTLT  R VCMAEPYL+ KL+S
Sbjct: 1   MNSLTASFTARIYGTRCDVVLLRNRSVHQFNNRRVTLLPTLTSTRFVCMAEPYLLLKLES 60

Query: 58  AEKTWKELSVKLADPDIVNNHTEYQKLAQXXXXXXXXXXXYRRFKDCEKSLEETKALAKD 117
           AEKTWK+LSVKLADPDIV+N +EYQKLAQ           Y++FKDCEK+LEET+ALAKD
Sbjct: 61  AEKTWKDLSVKLADPDIVSNPSEYQKLAQSVSELDVVVSLYQKFKDCEKTLEETQALAKD 120

Query: 118 DGNDEDMAEMISFEVDSLSRQXXXXXXXXXXXXXXXXXXXXRNIMIEVRAGTGGDEAGIW 177
            GND+DM EMIS+E++SLS+Q                    RNIM+EVRAGTGGDEAGIW
Sbjct: 121 AGNDQDMTEMISYEIESLSKQLSELEEKLKVLLLPSDPLDERNIMLEVRAGTGGDEAGIW 180

Query: 178 VGDLVRMYERYSERNSWKHSTISSSEAEKGGFKTFVMEIKGNCVYSKLKYESGVHRVQRV 237
            GDLVRMYE++SE NSWKHS IS SEAEKGG+KT+VMEIKGN VYSKLK+ESGVHRVQRV
Sbjct: 181 AGDLVRMYEKFSELNSWKHSAISCSEAEKGGYKTYVMEIKGNRVYSKLKFESGVHRVQRV 240

Query: 238 PLTETQGRVHTSTATVAIMXXXXXXXXXXXXXXXXLTTARSGGAGGQNVNKVETAIDLFH 297
           PLTETQGRVHTSTATVAIM                +TTARSGGAGGQNVNKVETAIDL H
Sbjct: 241 PLTETQGRVHTSTATVAIMPEVDEVEVVIDPKDIEVTTARSGGAGGQNVNKVETAIDLVH 300

Query: 298 KPTGIRIFCTEERTQLRNKHRALQLLRAKLYEIKLREQQESIRNERKSQIGTGARAEKIR 357
           KPTGIRIFCTE+RTQ++NK+ A +LLRAKLYEIK+REQQESIRN+RKSQ+GTGAR+EKIR
Sbjct: 301 KPTGIRIFCTEQRTQIQNKNLAFKLLRAKLYEIKVREQQESIRNQRKSQVGTGARSEKIR 360

Query: 358 TYNYKDNRVTDHRLKMNFELTSFLDGDIENAVQSCVTTEQKQLLEELAESANAPA 412
           TYNYKDNRVTDHRLK NF LTSFL G+IE AVQSCV  EQK+L+EEL ES  A A
Sbjct: 361 TYNYKDNRVTDHRLKQNFSLTSFLGGNIEEAVQSCVAMEQKELMEELVESMGATA 415


>Medtr7g110570.1 | peptide chain release factor 1 | HC |
           chr7:45311012-45315116 | 20130731
          Length = 438

 Score =  201 bits (511), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 156/276 (56%)

Query: 100 RFKDCEKSLEETKALAKDDGNDEDMAEMISFEVDSLSRQXXXXXXXXXXXXXXXXXXXXR 159
           + K  +K ++  K+L  +   D+DM  M + E+     +                    R
Sbjct: 99  QLKAKQKEIDGLKSLMNESSEDKDMLNMATEEMGQAIEEERKLQNLLLKSLLPKDDADER 158

Query: 160 NIMIEVRAGTGGDEAGIWVGDLVRMYERYSERNSWKHSTISSSEAEKGGFKTFVMEIKGN 219
           + ++EVRAGTGG+EA ++  ++ +MYE+Y+    WK   +  ++++  GFK     I G 
Sbjct: 159 DCILEVRAGTGGEEASLFAMNIFKMYEKYAHNKGWKFDVVDIAQSDMKGFKEATAAILGV 218

Query: 220 CVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMXXXXXXXXXXXXXXXXLTTARSG 279
            V+ KLK+ESG+HRVQRVP+TE  GRVHTS  +VAI+                +   RSG
Sbjct: 219 GVFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDVQLKKEDLKIDFYRSG 278

Query: 280 GAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLRNKHRALQLLRAKLYEIKLREQQESI 339
           G+GGQ+ NK  +A+ + H PTGI I   +ER+Q  NK +AL++L AKLYEI+      S 
Sbjct: 279 GSGGQHANKTSSAVRMTHIPTGIVIAIQDERSQHMNKAKALKVLCAKLYEIERTRLHSSR 338

Query: 340 RNERKSQIGTGARAEKIRTYNYKDNRVTDHRLKMNF 375
              R  QIG+G R+E+IRTYN+   RVTDHR+ + +
Sbjct: 339 SKLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITY 374


>Medtr7g110570.2 | peptide chain release factor 1 | HC |
           chr7:45310948-45315157 | 20130731
          Length = 403

 Score =  199 bits (506), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 103/264 (39%), Positives = 150/264 (56%)

Query: 112 KALAKDDGNDEDMAEMISFEVDSLSRQXXXXXXXXXXXXXXXXXXXXRNIMIEVRAGTGG 171
           K+L  +   D+DM  M + E+     +                    R+ ++EVRAGTGG
Sbjct: 105 KSLMNESSEDKDMLNMATEEMGQAIEEERKLQNLLLKSLLPKDDADERDCILEVRAGTGG 164

Query: 172 DEAGIWVGDLVRMYERYSERNSWKHSTISSSEAEKGGFKTFVMEIKGNCVYSKLKYESGV 231
           +EA ++  ++ +MYE+Y+    WK   +  ++++  GFK     I G  V+ KLK+ESG+
Sbjct: 165 EEASLFAMNIFKMYEKYAHNKGWKFDVVDIAQSDMKGFKEATAAILGVGVFGKLKFESGI 224

Query: 232 HRVQRVPLTETQGRVHTSTATVAIMXXXXXXXXXXXXXXXXLTTARSGGAGGQNVNKVET 291
           HRVQRVP+TE  GRVHTS  +VAI+                +   RSGG+GGQ+ NK  +
Sbjct: 225 HRVQRVPVTEKLGRVHTSAVSVAILPQADEVDVQLKKEDLKIDFYRSGGSGGQHANKTSS 284

Query: 292 AIDLFHKPTGIRIFCTEERTQLRNKHRALQLLRAKLYEIKLREQQESIRNERKSQIGTGA 351
           A+ + H PTGI I   +ER+Q  NK +AL++L AKLYEI+      S    R  QIG+G 
Sbjct: 285 AVRMTHIPTGIVIAIQDERSQHMNKAKALKVLCAKLYEIERTRLHSSRSKLRSDQIGSGD 344

Query: 352 RAEKIRTYNYKDNRVTDHRLKMNF 375
           R+E+IRTYN+   RVTDHR+ + +
Sbjct: 345 RSERIRTYNFPQGRVTDHRVGITY 368


>Medtr7g080430.1 | peptide chain release factor 2 | HC |
           chr7:30593686-30589146 | 20130731
          Length = 475

 Score =  129 bits (325), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 126/238 (52%), Gaps = 13/238 (5%)

Query: 162 MIEVRAGTGGDEAGIWVGDLVRMYERYSERNSWKHSTISSSEAEKGGFKTFVMEIKGNCV 221
           +I + AG GG +A  W   L+RMY R+ E+  +K   +  S  E+ G K+  +E++G   
Sbjct: 227 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSATIEVEGRYA 286

Query: 222 YSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMXXXXXXXXXXXXXXXXL--TTARSG 279
           Y  L  E G HR+ R     ++G   TS + V +M                L  + +R+G
Sbjct: 287 YGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESLNVEIPEEDLEISFSRAG 346

Query: 280 GAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLRNKHRALQLLRAKLYEIKLREQQESI 339
           G GGQNVNKVETA+ + H PTG+ + CTEER+QL NK +AL  L+AKL  I   EQ+ + 
Sbjct: 347 GKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIKALSRLKAKLLVIA-EEQRATE 405

Query: 340 RNERKSQIGTGARAEKIRTYNY------KDNRVTDHRLKMNFELTSFLDGDIENAVQS 391
             + +  +      ++IR Y +      KD R T H      ++TS +DG+++  ++S
Sbjct: 406 FKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVR-TGHETP---DITSVIDGELDPFIKS 459


>Medtr7g112100.1 | peptide chain release factor 2 | HC |
           chr7:46081007-46085393 | 20130731
          Length = 475

 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 126/241 (52%), Gaps = 7/241 (2%)

Query: 159 RNIMIEVRAGTGGDEAGIWVGDLVRMYERYSERNSWKHSTISSSEAEKGGFKTFVMEIKG 218
           R+  IEV+AG GG E+  W   +++MY+ +++R  +K + +     E  G K   +++ G
Sbjct: 227 RSCYIEVQAGAGGTESMDWASMIMQMYKSWAQRRGYKVTVMEEMPGEIAGIKRATIKVDG 286

Query: 219 NCVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMXXXXXXXXXXXXXXXXLTTA-- 276
              +   K E GVHR+ R+   ++  R HTS A VA++                L     
Sbjct: 287 EFAFGYAKAEIGVHRLVRISPFDSNKRRHTSFAAVAVIPNLGDESSSVQINESDLRIERF 346

Query: 277 RSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLRNKHRALQLLRAKLYEIKLREQQ 336
           R+ GAGGQ+VN  E+A+ + H PTG+   C  ER+Q +NK  A+ +L+++L +I++  Q 
Sbjct: 347 RASGAGGQHVNTTESAVKITHIPTGVTATCQNERSQHQNKASAMAVLQSRLNQIEMARQA 406

Query: 337 ESIRNERKSQIGTGARAEKIRTYNYKDNRVTDHRLKMNFELT---SFLDGDIENAVQSCV 393
           + +  +    +       +IR+Y     R+    L+ N+E++   S L+GD++  + S +
Sbjct: 407 Q-LNAQHTQSLTDITWGSQIRSYVLHPYRMVKD-LRTNYEVSDPDSVLEGDLDGFIMSYL 464

Query: 394 T 394
           +
Sbjct: 465 S 465


>Medtr1g041890.1 | peptide chain release factor, putative | HC |
           chr1:20209058-20203032 | 20130731
          Length = 548

 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 8/236 (3%)

Query: 165 VRAGTGGDEAGIWVGDLVRMYERYSERNSWKHSTISSSEAEKGGFKTFVMEIKGNCVYSK 224
           ++A TG   + +W   L++MY  +++R  ++   +     E GG  +  +E +  C Y  
Sbjct: 318 IKAATG-IFSKLWAEQLLQMYLGWAKRQGYEGRIVDRCLTENGGINSATIEFEFECAYGY 376

Query: 225 LKYESGVHRVQRVPLTETQGRVHTSTATVAIMXXXXXXXXXXXXXXXXLTTARSGGAGGQ 284
           L  E GVH + R    E+  ++ TSTATV ++                L  + S    G+
Sbjct: 377 LLGEKGVHHLIRGSPNESS-QLETSTATVDVIPLFLEKALDLEIDSEDLIIS-SPLIHGE 434

Query: 285 NVNKVETAIDLFHKPTGIRIFCTEERTQLRNKHRALQLLRAKLYEIKLREQQESIRNERK 344
              + +  + + H PTGI +  + ER+Q  NK +AL  L+AKL  I + +   SI    K
Sbjct: 435 QKRQTQRIVCIHHIPTGITVQSSGERSQFANKMKALNRLKAKLQVIAIEQGVGSINGIVK 494

Query: 345 SQIGTGARAEKIRTYNYKDNRVTDHRLKMNFE---LTSFLDGDIENAVQSCVTTEQ 397
            +I      EK R Y     ++  H +K + E   L S LDG+I   + + + T +
Sbjct: 495 DKI-VNLWEEKTRRYVSHPYKLV-HDVKTDIEMSDLNSVLDGNIGPLIAAHINTRE 548