Miyakogusa Predicted Gene

Lj1g3v4916340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4916340.1 tr|I3SXM3|I3SXM3_LOTJA Ribosomal protein L19
OS=Lotus japonicus PE=2 SV=1,99.32,0,Ribosomal protein L19
(L19e),Ribosomal protein L19/L19e; 60S RIBOSOMAL PROTEIN L19,NULL;
seg,NULL; R,CUFF.33583.1
         (147 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g108955.1 | 60S ribosomal protein L19 | HC | chr7:44555076...   173   6e-44
Medtr1g087910.1 | 60S ribosomal protein L19 | HC | chr1:39358053...   173   6e-44
Medtr1g087910.2 | 60S ribosomal protein L19 | HC | chr1:39358041...   172   8e-44
Medtr7g108955.2 | 60S ribosomal protein L19 | HC | chr7:44555183...   172   8e-44

>Medtr7g108955.1 | 60S ribosomal protein L19 | HC |
           chr7:44555076-44557091 | 20130731
          Length = 219

 Score =  173 bits (438), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 90/121 (74%), Positives = 91/121 (75%)

Query: 1   MKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYM 60
           MKEAKRKGRHSGYGKRKGTREARLPTKI              KYRE+KKIDKHMYHDMYM
Sbjct: 66  MKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYM 125

Query: 61  KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNXXXXXXXXXXXXXXXXQGP 120
           KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN                QGP
Sbjct: 126 KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERFAQGP 185

Query: 121 G 121
           G
Sbjct: 186 G 186


>Medtr1g087910.1 | 60S ribosomal protein L19 | HC |
           chr1:39358053-39355401 | 20130731
          Length = 213

 Score =  173 bits (438), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 90/122 (73%), Positives = 92/122 (75%)

Query: 1   MKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYM 60
           MKEAKRKGRHSGYGKRKGTREARLPTKI              KYRE+KKIDKHMYHDMYM
Sbjct: 66  MKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYM 125

Query: 61  KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNXXXXXXXXXXXXXXXXQGP 120
           KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN                QGP
Sbjct: 126 KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERFAQGP 185

Query: 121 GD 122
           G+
Sbjct: 186 GE 187


>Medtr1g087910.2 | 60S ribosomal protein L19 | HC |
           chr1:39358041-39355531 | 20130731
          Length = 206

 Score =  172 bits (437), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 90/122 (73%), Positives = 92/122 (75%)

Query: 1   MKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYM 60
           MKEAKRKGRHSGYGKRKGTREARLPTKI              KYRE+KKIDKHMYHDMYM
Sbjct: 66  MKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYM 125

Query: 61  KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNXXXXXXXXXXXXXXXXQGP 120
           KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN                QGP
Sbjct: 126 KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERFAQGP 185

Query: 121 GD 122
           G+
Sbjct: 186 GE 187


>Medtr7g108955.2 | 60S ribosomal protein L19 | HC |
           chr7:44555183-44556767 | 20130731
          Length = 208

 Score =  172 bits (437), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 90/121 (74%), Positives = 91/121 (75%)

Query: 1   MKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYM 60
           MKEAKRKGRHSGYGKRKGTREARLPTKI              KYRE+KKIDKHMYHDMYM
Sbjct: 66  MKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYM 125

Query: 61  KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNXXXXXXXXXXXXXXXXQGP 120
           KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN                QGP
Sbjct: 126 KVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERFAQGP 185

Query: 121 G 121
           G
Sbjct: 186 G 186