Miyakogusa Predicted Gene
- Lj1g3v4897990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4897990.1 Non Characterized Hit- tr|J3LXM1|J3LXM1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G1,69.44,3e-19,2FE2S_FER_2,2Fe-2S ferredoxin-type domain;
fdx_plant: ferredoxin [2Fe-2S],Ferredoxin [2Fe-2S], plant,CUFF.33575.1
(152 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g112030.1 | 2Fe-2S ferredoxin superfamily protein | HC | c... 219 5e-58
Medtr1g112030.2 | 2Fe-2S ferredoxin superfamily protein | HC | c... 219 5e-58
Medtr1g112030.3 | 2Fe-2S ferredoxin superfamily protein | HC | c... 219 5e-58
Medtr1g112030.4 | 2Fe-2S ferredoxin superfamily protein | HC | c... 219 6e-58
Medtr1g112050.1 | 2Fe-2S ferredoxin superfamily protein | HC | c... 214 3e-56
Medtr2g086510.1 | 2Fe-2S ferredoxin superfamily protein | HC | c... 172 7e-44
Medtr4g053120.1 | 2Fe-2S ferredoxin superfamily protein | HC | c... 165 2e-41
Medtr8g088720.1 | 2Fe-2S ferredoxin superfamily protein | HC | c... 122 1e-28
Medtr2g006290.1 | 2Fe-2S ferredoxin superfamily protein | HC | c... 120 6e-28
Medtr4g098490.1 | 2Fe-2S ferredoxin superfamily protein | HC | c... 72 2e-13
Medtr5g006320.1 | 2Fe-2S ferredoxin superfamily protein | HC | c... 71 3e-13
>Medtr1g112030.1 | 2Fe-2S ferredoxin superfamily protein | HC |
chr1:50655412-50652675 | 20130731
Length = 156
Score = 219 bits (559), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 109/150 (72%), Positives = 120/150 (80%)
Query: 3 TISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVKL 62
+SA+RL TA L GTA +R SCA KS SSL SVKNVSK F LKSSSFRV AMA YKVKL
Sbjct: 7 NMSAVRLTTASLYGTAPSRTSCALRKSPSSLRSVKNVSKTFGLKSSSFRVSAMAVYKVKL 66
Query: 63 IGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXX 122
IGPDG E+EF+APDDSYILD+AE+AGV+LPYSCRAGACSTCAGQ+V+G
Sbjct: 67 IGPDGTENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDE 126
Query: 123 XXVEKGYLLTCVSYPKSDCVIYTHKEEELY 152
+EKGYLLTCVSYPKSD VIYTHKEEELY
Sbjct: 127 QQIEKGYLLTCVSYPKSDTVIYTHKEEELY 156
>Medtr1g112030.2 | 2Fe-2S ferredoxin superfamily protein | HC |
chr1:50655291-50652678 | 20130731
Length = 156
Score = 219 bits (559), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 109/150 (72%), Positives = 120/150 (80%)
Query: 3 TISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVKL 62
+SA+RL TA L GTA +R SCA KS SSL SVKNVSK F LKSSSFRV AMA YKVKL
Sbjct: 7 NMSAVRLTTASLYGTAPSRTSCALRKSPSSLRSVKNVSKTFGLKSSSFRVSAMAVYKVKL 66
Query: 63 IGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXX 122
IGPDG E+EF+APDDSYILD+AE+AGV+LPYSCRAGACSTCAGQ+V+G
Sbjct: 67 IGPDGTENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDE 126
Query: 123 XXVEKGYLLTCVSYPKSDCVIYTHKEEELY 152
+EKGYLLTCVSYPKSD VIYTHKEEELY
Sbjct: 127 QQIEKGYLLTCVSYPKSDTVIYTHKEEELY 156
>Medtr1g112030.3 | 2Fe-2S ferredoxin superfamily protein | HC |
chr1:50655297-50652678 | 20130731
Length = 156
Score = 219 bits (559), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 109/150 (72%), Positives = 120/150 (80%)
Query: 3 TISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVKL 62
+SA+RL TA L GTA +R SCA KS SSL SVKNVSK F LKSSSFRV AMA YKVKL
Sbjct: 7 NMSAVRLTTASLYGTAPSRTSCALRKSPSSLRSVKNVSKTFGLKSSSFRVSAMAVYKVKL 66
Query: 63 IGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXX 122
IGPDG E+EF+APDDSYILD+AE+AGV+LPYSCRAGACSTCAGQ+V+G
Sbjct: 67 IGPDGTENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDE 126
Query: 123 XXVEKGYLLTCVSYPKSDCVIYTHKEEELY 152
+EKGYLLTCVSYPKSD VIYTHKEEELY
Sbjct: 127 QQIEKGYLLTCVSYPKSDTVIYTHKEEELY 156
>Medtr1g112030.4 | 2Fe-2S ferredoxin superfamily protein | HC |
chr1:50655412-50652678 | 20130731
Length = 160
Score = 219 bits (559), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/150 (72%), Positives = 120/150 (80%)
Query: 3 TISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVKL 62
+SA+RL TA L GTA +R SCA KS SSL SVKNVSK F LKSSSFRV AMA YKVKL
Sbjct: 11 NMSAVRLTTASLYGTAPSRTSCALRKSPSSLRSVKNVSKTFGLKSSSFRVSAMAVYKVKL 70
Query: 63 IGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXX 122
IGPDG E+EF+APDDSYILD+AE+AGV+LPYSCRAGACSTCAGQ+V+G
Sbjct: 71 IGPDGTENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDE 130
Query: 123 XXVEKGYLLTCVSYPKSDCVIYTHKEEELY 152
+EKGYLLTCVSYPKSD VIYTHKEEELY
Sbjct: 131 QQIEKGYLLTCVSYPKSDTVIYTHKEEELY 160
>Medtr1g112050.1 | 2Fe-2S ferredoxin superfamily protein | HC |
chr1:50664256-50662165 | 20130731
Length = 154
Score = 214 bits (544), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/149 (70%), Positives = 116/149 (77%)
Query: 3 TISAMRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKAFALKSSSFRVCAMAAYKVKL 62
+S MRLPTA L GTA +R SCA K+ S+L SVKNVSK F LKSSSFR+ AMA YKVKL
Sbjct: 5 NMSTMRLPTASLHGTASSRTSCALLKNPSTLRSVKNVSKRFGLKSSSFRISAMAVYKVKL 64
Query: 63 IGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXX 122
I PDG E+EF+APDD YILD+AE AGV+LPYSCRAGACSTCAGQ+VSG
Sbjct: 65 IQPDGTENEFDAPDDYYILDSAEEAGVELPYSCRAGACSTCAGQVVSGSVDQSDQSFLDK 124
Query: 123 XXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
+EKGYLLTCVSYPKSD VIYTHKEEEL
Sbjct: 125 QQIEKGYLLTCVSYPKSDTVIYTHKEEEL 153
>Medtr2g086510.1 | 2Fe-2S ferredoxin superfamily protein | HC |
chr2:36370630-36373136 | 20130731
Length = 155
Score = 172 bits (437), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/154 (60%), Positives = 112/154 (72%), Gaps = 4/154 (2%)
Query: 1 MSTISAMRLPTAPLPGTAHTRRSCAFT-KSASSLGSVKNVSKAFALKSS-SFRVCAMAAY 58
+ST+ R T L T + + A T K SSLGS KNVS++F LKSS S RV A+AAY
Sbjct: 4 LSTVKVYRYCT--LKATNQNQFTTAATVKCPSSLGSAKNVSRSFGLKSSASSRVTAVAAY 61
Query: 59 KVKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXX 118
KVKLIGPDG E+EFEA DD+YILDAAENAGV+LPYSCRAGACSTCAG++VSG
Sbjct: 62 KVKLIGPDGKENEFEATDDTYILDAAENAGVELPYSCRAGACSTCAGKVVSGSVDQSDGS 121
Query: 119 XXXXXXVEKGYLLTCVSYPKSDCVIYTHKEEELY 152
+ +GY+LTCV+YP SDCVI+THKE +L+
Sbjct: 122 FLDDNQLNEGYVLTCVAYPTSDCVIHTHKEGDLF 155
>Medtr4g053120.1 | 2Fe-2S ferredoxin superfamily protein | HC |
chr4:19231223-19228071 | 20130731
Length = 155
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 109/155 (70%), Gaps = 3/155 (1%)
Query: 1 MSTISAMRLPTAPLPGTAHTRRSCAFT--KSASSLGSVKNVSKAFALKSSS-FRVCAMAA 57
M+++SA+ + + TA+ +S T K SS GS K SK LKSSS +R AMAA
Sbjct: 1 MASLSAVNVSPLCMIQTANRNQSTIATTAKFPSSFGSTKTYSKTCGLKSSSSYRTTAMAA 60
Query: 58 YKVKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXX 117
YKVKLIGPDG E+EF+APDD YILDAAE+AGV+LPYSCRAGACSTCAG++VSG
Sbjct: 61 YKVKLIGPDGKENEFDAPDDVYILDAAEDAGVELPYSCRAGACSTCAGKIVSGSVDQSDG 120
Query: 118 XXXXXXXVEKGYLLTCVSYPKSDCVIYTHKEEELY 152
++ G++LTCVSYP +DC+I THKE ELY
Sbjct: 121 SFLDDNQLKDGFVLTCVSYPTADCIIETHKEGELY 155
>Medtr8g088720.1 | 2Fe-2S ferredoxin superfamily protein | HC |
chr8:36851760-36851051 | 20130731
Length = 148
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Query: 7 MRLPTAPLPGTAHTRRSCAFTKSASSLGSVKNVSKA-FALKSS-SFRVCAMAAYKVKLIG 64
M TA L GT + +SL + NV + F +K+ R+ AMA YKVKLI
Sbjct: 1 MATTTAALSGTMVSTSFIRRQPMNTSLTAFPNVGQTLFGVKAGRGSRITAMATYKVKLIT 60
Query: 65 PDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXXXX 124
PDG + E PD+ YILD AE G+DLPYSCRAGACS+CA ++V G
Sbjct: 61 PDGTK-ELTCPDNEYILDVAEEQGIDLPYSCRAGACSSCAAKVVEGEVDNSDNSFLDDDQ 119
Query: 125 VEKGYLLTCVSYPKSDCVIYTHKEEEL 151
+ G++LTCV+YP+SD VI THKEE+L
Sbjct: 120 LSAGFVLTCVAYPRSDLVIETHKEEDL 146
>Medtr2g006290.1 | 2Fe-2S ferredoxin superfamily protein | HC |
chr2:526002-525142 | 20130731
Length = 150
Score = 120 bits (300), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 87/148 (58%), Gaps = 9/148 (6%)
Query: 12 APLPGTAHTRRSCAFTKSASSLGSVKNVSKAF----ALKSSSFR----VCAMAAYKVKLI 63
A P T S +F + S+ +KAF LKS + + AMA YKVKL+
Sbjct: 2 ATTPALYGTAVSTSFLRRQPMPVSISTTTKAFPSGFGLKSKTGKRGDLAVAMATYKVKLV 61
Query: 64 GPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXXX 123
P+G + EF+ P D YILD AE G+DLPYSCRAG+CS+CAG++ +G
Sbjct: 62 TPEGTQ-EFDCPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVAAGAVDQSDGSFLDDD 120
Query: 124 XVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
+E+G++LTCV+YP SD I THKEEEL
Sbjct: 121 QIEEGWVLTCVAYPTSDVTIETHKEEEL 148
>Medtr4g098490.1 | 2Fe-2S ferredoxin superfamily protein | HC |
chr4:40576223-40581012 | 20130731
Length = 186
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%)
Query: 67 GAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXXXXXXXXXXXVE 126
G EF P+D YIL AE+ + LP++CR G C++CA ++ +G E
Sbjct: 74 GVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKNGKIKQPEALGISAELRE 133
Query: 127 KGYLLTCVSYPKSDCVIYTHKEEELY 152
+GY L CVS+P SD + T E+E+Y
Sbjct: 134 QGYALLCVSFPYSDLEVETQDEDEVY 159
>Medtr5g006320.1 | 2Fe-2S ferredoxin superfamily protein | HC |
chr5:857389-856587 | 20130731
Length = 153
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 56 AAYKVKLIGPDGAESEFEAPDDSYILDAAENAGVDLPYSCRAGACSTCAGQLVSGXXXXX 115
++YKV +I +G ++ E D IL A ++G+D+P+ C+ G C TC +L+SG
Sbjct: 50 SSYKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISG-TVDQ 107
Query: 116 XXXXXXXXXVEKGYLLTCVSYPKSDCVIYTHKEEEL 151
VE+GY L C SYP+SDC I E+EL
Sbjct: 108 SDGMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143