Miyakogusa Predicted Gene

Lj1g3v4875770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4875770.1 Non Characterized Hit- tr|I3SYW4|I3SYW4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,Ribosomal
proteins L15p and L18e,Ribosomal protein L18e/L15P; 60S RIBOSOMAL
PROTEIN L18,Ribosomal pr,NODE_34570_length_688_cov_235.547958.path2.1
         (187 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g112880.1 | 60S ribosomal protein L18-3 | HC | chr7:464531...   334   4e-92
Medtr1g083460.1 | 60S ribosomal protein L18-3 | HC | chr1:371456...   332   9e-92
Medtr7g108805.1 | 60S ribosomal protein L18-3 | HC | chr7:444380...   332   9e-92
Medtr7g112880.2 | 60S ribosomal protein L18-3 | HC | chr7:464543...   239   2e-63
Medtr4g005170.1 | pectinesterase/pectinesterase inhibitor, putat...    96   2e-20

>Medtr7g112880.1 | 60S ribosomal protein L18-3 | HC |
           chr7:46453189-46456007 | 20130731
          Length = 187

 Score =  334 bits (856), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 165/187 (88%), Positives = 174/187 (93%)

Query: 1   MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNSVILKRLFMSKVNKA 60
           MGIDLKAGGKSK TKRT PKSNDIYLKLLVKLYRFLVRRT SNFN+VILKRLFMSKVN+ 
Sbjct: 1   MGIDLKAGGKSKNTKRTEPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRP 60

Query: 61  PLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           P+SLS++I Y KGK+GKI VVVGAVTDDIRVYEVP LK+AALRFTETARARIEKAGGECL
Sbjct: 61  PISLSKMIEYMKGKDGKIGVVVGAVTDDIRVYEVPVLKIAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALIAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSNGRKFEKARGKR 180
           TFDQLAL APLGQNTVLLRGPKNAREAVKHFG APGVPHSH+KPYVRS GRK EKARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSHSKPYVRSKGRKQEKARGKR 180

Query: 181 NSKGFRV 187
            S+GFRV
Sbjct: 181 KSRGFRV 187


>Medtr1g083460.1 | 60S ribosomal protein L18-3 | HC |
           chr1:37145694-37147930 | 20130731
          Length = 187

 Score =  332 bits (852), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 166/187 (88%), Positives = 173/187 (92%)

Query: 1   MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNSVILKRLFMSKVNKA 60
           MGIDLKAGGK+KKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFN+VILKRLFMSKVNK 
Sbjct: 1   MGIDLKAGGKNKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLI+YT GKEGKIAVVVGA+TDD+RV EVPA+KV ALRFTE ARARIE AGGECL
Sbjct: 61  PLSLSRLIKYTNGKEGKIAVVVGAITDDVRVNEVPAIKVTALRFTERARARIESAGGECL 120

Query: 121 TFDQLALIAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSNGRKFEKARGKR 180
           TFDQLAL APLGQNTVLLRGPKNAREAVKHFG APGVP SHTKPYVR   RK EKARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPQSHTKPYVRGKSRKIEKARGKR 180

Query: 181 NSKGFRV 187
            S+GFRV
Sbjct: 181 KSRGFRV 187


>Medtr7g108805.1 | 60S ribosomal protein L18-3 | HC |
           chr7:44438084-44440656 | 20130731
          Length = 188

 Score =  332 bits (852), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 170/188 (90%), Positives = 174/188 (92%), Gaps = 1/188 (0%)

Query: 1   MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNSVILKRLFMSKVNKA 60
           MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRT SNFN VILKRLFMSKVNK 
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESNFNKVILKRLFMSKVNKP 60

Query: 61  PLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPAIKVTALRFTEKARARIEKAGGECL 120

Query: 121 TFDQLALIAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRS-NGRKFEKARGK 179
           TFDQLAL APLGQNTVLLRGPKNAREAVKHFG APGVPHS+TKPYVR    RK E ARGK
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSNTKPYVRGKKSRKVEAARGK 180

Query: 180 RNSKGFRV 187
           R S+GF+V
Sbjct: 181 RKSRGFKV 188


>Medtr7g112880.2 | 60S ribosomal protein L18-3 | HC |
           chr7:46454381-46456006 | 20130731
          Length = 134

 Score =  239 bits (609), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 116/134 (86%), Positives = 124/134 (92%)

Query: 54  MSKVNKAPLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPALKVAALRFTETARARIE 113
           MSKVN+ P+SLS++I Y KGK+GKI VVVGAVTDDIRVYEVP LK+AALRFTETARARIE
Sbjct: 1   MSKVNRPPISLSKMIEYMKGKDGKIGVVVGAVTDDIRVYEVPVLKIAALRFTETARARIE 60

Query: 114 KAGGECLTFDQLALIAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSNGRKF 173
           KAGGECLTFDQLAL APLGQNTVLLRGPKNAREAVKHFG APGVPHSH+KPYVRS GRK 
Sbjct: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSHSKPYVRSKGRKQ 120

Query: 174 EKARGKRNSKGFRV 187
           EKARGKR S+GFRV
Sbjct: 121 EKARGKRKSRGFRV 134


>Medtr4g005170.1 | pectinesterase/pectinesterase inhibitor, putative
           | HC | chr4:93161-90433 | 20130731
          Length = 636

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/55 (80%), Positives = 46/55 (83%)

Query: 133 QNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSNGRKFEKARGKRNSKGFRV 187
           + TVLLRGPKNAREAVKHFG AP VP SHTKPYVR   RK EKARGKR S+GFRV
Sbjct: 582 EKTVLLRGPKNAREAVKHFGRAPVVPQSHTKPYVRGKSRKIEKARGKRKSRGFRV 636