Miyakogusa Predicted Gene

Lj1g3v4865390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4865390.1 tr|I3SJE5|I3SJE5_LOTJA Ribosomal protein L19
OS=Lotus japonicus PE=2 SV=1,100,0,coiled-coil,NULL; seg,NULL;
Ribosomal protein L19 (L19e),Ribosomal protein L19/L19e; 60S RIBOSOMAL
P,CUFF.33513.1
         (212 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g087910.1 | 60S ribosomal protein L19 | HC | chr1:39358053...   337   3e-93
Medtr1g087910.2 | 60S ribosomal protein L19 | HC | chr1:39358041...   337   4e-93
Medtr7g108955.1 | 60S ribosomal protein L19 | HC | chr7:44555076...   335   1e-92
Medtr7g108955.2 | 60S ribosomal protein L19 | HC | chr7:44555183...   334   3e-92

>Medtr1g087910.1 | 60S ribosomal protein L19 | HC |
           chr1:39358053-39355401 | 20130731
          Length = 213

 Score =  337 bits (865), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 168/188 (89%), Positives = 173/188 (92%)

Query: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI              KYRE+KKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGDK 188
            AQGPG+K
Sbjct: 181 FAQGPGEK 188


>Medtr1g087910.2 | 60S ribosomal protein L19 | HC |
           chr1:39358041-39355531 | 20130731
          Length = 206

 Score =  337 bits (865), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 168/188 (89%), Positives = 173/188 (92%)

Query: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI              KYRE+KKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGDK 188
            AQGPG+K
Sbjct: 181 FAQGPGEK 188


>Medtr7g108955.1 | 60S ribosomal protein L19 | HC |
           chr7:44555076-44557091 | 20130731
          Length = 219

 Score =  335 bits (860), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 167/186 (89%), Positives = 170/186 (91%)

Query: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLASSVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI              KYRE+KKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG 186
            AQGPG
Sbjct: 181 FAQGPG 186


>Medtr7g108955.2 | 60S ribosomal protein L19 | HC |
           chr7:44555183-44556767 | 20130731
          Length = 208

 Score =  334 bits (857), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 167/186 (89%), Positives = 170/186 (91%)

Query: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLASSVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI              KYRE+KKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK+KAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG 186
            AQGPG
Sbjct: 181 FAQGPG 186