Miyakogusa Predicted Gene

Lj1g3v4863140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4863140.1 tr|A9SS49|A9SS49_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_233966,32.38,5e-19,seg,NULL; Di19,Drought induced 19/
RING finger protein 114; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAM,CUFF.33487.1
         (231 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g109145.2 | drought-induced protein | HC | chr7:44618720-4...   215   3e-56
Medtr7g109145.1 | drought-induced protein | HC | chr7:44620307-4...   214   5e-56
Medtr7g109145.3 | drought-induced protein | HC | chr7:44618901-4...   199   2e-51
Medtr1g083780.1 | protein dehydration-induced-like protein | HC ...   144   1e-34
Medtr2g035070.1 | drought-induced protein | HC | chr2:13467798-1...   123   2e-28
Medtr7g112400.1 | drought-induced protein | HC | chr7:46179418-4...    80   2e-15
Medtr7g112403.1 | protein dehydration-induced-like protein | HC ...    77   1e-14

>Medtr7g109145.2 | drought-induced protein | HC |
           chr7:44618720-44617062 | 20130731
          Length = 149

 Score =  215 bits (547), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 104/149 (69%), Positives = 121/149 (81%)

Query: 83  VQLCPVCAVWIGANMVEHIAAQHGNIFKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFY 142
           +Q+CPVCA+W+G N+V+HI AQHG++FKS LKSK H+HDSY TLSFSRK   D HW+S  
Sbjct: 1   MQICPVCAMWVGTNIVDHITAQHGDLFKSHLKSKSHKHDSYQTLSFSRKGRRDGHWKSCS 60

Query: 143 AGSSPVTSTSETARDPLLSFLCGAAAAGEHQNVQPDSSSELSIEETHSDDTVLERDVEPS 202
              SPV  TS+T  DP LSFLCGA A+GEH+NVQ DSSSE SIEE HS DTVLERDV PS
Sbjct: 61  DELSPVMPTSKTTCDPFLSFLCGATASGEHENVQLDSSSEASIEEIHSHDTVLERDVPPS 120

Query: 203 LPDKDRIEKARRSKFVQGLLMSTFLDPDL 231
           L  KD++EKARRS+FVQGLL+ST LDPDL
Sbjct: 121 LSHKDQVEKARRSEFVQGLLLSTILDPDL 149


>Medtr7g109145.1 | drought-induced protein | HC |
           chr7:44620307-44617437 | 20130731
          Length = 193

 Score =  214 bits (545), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/217 (56%), Positives = 139/217 (64%), Gaps = 28/217 (12%)

Query: 15  ASRTHRSRLKSHXXXXXXXXXXXXXXXXXXXXXXLRTAYPCPFCEEDFDLLELCCHIDLD 74
            S++++SRLKSH                      L T YPCPFCEEDFDLLELC HIDLD
Sbjct: 5   TSKSYQSRLKSHLELLIDFEEVNGDEE-------LMTIYPCPFCEEDFDLLELCFHIDLD 57

Query: 75  HQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQLKSKRHQHDSYPTLSFSRKDEE 134
           H IEA+SG      C ++                  S LKSK H+HDSY TLSFSRK   
Sbjct: 58  HPIEAESG------CYLYSDY---------------SHLKSKSHKHDSYQTLSFSRKGRR 96

Query: 135 DRHWESFYAGSSPVTSTSETARDPLLSFLCGAAAAGEHQNVQPDSSSELSIEETHSDDTV 194
           D HW+S     SPV  TS+T  DP LSFLCGA A+GEH+NVQ DSSSE SIEE HS DTV
Sbjct: 97  DGHWKSCSDELSPVMPTSKTTCDPFLSFLCGATASGEHENVQLDSSSEASIEEIHSHDTV 156

Query: 195 LERDVEPSLPDKDRIEKARRSKFVQGLLMSTFLDPDL 231
           LERDV PSL  KD++EKARRS+FVQGLL+ST LDPDL
Sbjct: 157 LERDVPPSLSHKDQVEKARRSEFVQGLLLSTILDPDL 193


>Medtr7g109145.3 | drought-induced protein | HC |
           chr7:44618901-44617062 | 20130731
          Length = 141

 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 98/141 (69%), Positives = 113/141 (80%)

Query: 91  VWIGANMVEHIAAQHGNIFKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTS 150
           +W+G N+V+HI AQHG++FKS LKSK H+HDSY TLSFSRK   D HW+S     SPV  
Sbjct: 1   MWVGTNIVDHITAQHGDLFKSHLKSKSHKHDSYQTLSFSRKGRRDGHWKSCSDELSPVMP 60

Query: 151 TSETARDPLLSFLCGAAAAGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIE 210
           TS+T  DP LSFLCGA A+GEH+NVQ DSSSE SIEE HS DTVLERDV PSL  KD++E
Sbjct: 61  TSKTTCDPFLSFLCGATASGEHENVQLDSSSEASIEEIHSHDTVLERDVPPSLSHKDQVE 120

Query: 211 KARRSKFVQGLLMSTFLDPDL 231
           KARRS+FVQGLL+ST LDPDL
Sbjct: 121 KARRSEFVQGLLLSTILDPDL 141


>Medtr1g083780.1 | protein dehydration-induced-like protein | HC |
           chr1:37296369-37293770 | 20130731
          Length = 219

 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/189 (43%), Positives = 116/189 (61%), Gaps = 16/189 (8%)

Query: 49  LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
           +R  + CPFC E FD++ LCCHID +H +EAK+GV  CPVCA+ +G +MV HI  QHG  
Sbjct: 41  IREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGV--CPVCALRVGVDMVAHITLQHGKY 98

Query: 109 FKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCG--- 165
            + + KS++    SY TLS  RK+  + + +S + GS  + S+S  A DPLLS       
Sbjct: 99  MQRKRKSRK--GGSYSTLSLLRKELREGNLQSLFGGSPCIVSSSNAAPDPLLSSFISPLG 156

Query: 166 --AAAAGEHQNVQPDSSSELSIEETHSDDTVLERDVE-PSLPDKDRIEKARRSKFVQGLL 222
             +A++  H + +  SS +L      SD+ V +  VE P++  KD+ EKA+R +FVQGLL
Sbjct: 157 NESASSQSHTHTETRSSKKL------SDEVVSKSHVETPTMSVKDKEEKAKRCEFVQGLL 210

Query: 223 MSTFLDPDL 231
           MST  D DL
Sbjct: 211 MSTIFDDDL 219


>Medtr2g035070.1 | drought-induced protein | HC |
           chr2:13467798-13470420 | 20130731
          Length = 227

 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 99/190 (52%), Gaps = 9/190 (4%)

Query: 49  LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
           LR  Y CPFC ED+D++ LCCHID +H ++A +GV  CP C   +G ++V HI  QH   
Sbjct: 40  LRAEYLCPFCAEDYDVVSLCCHIDEEHPLQANTGV--CPACGQKVGMDLVAHITTQHAKF 97

Query: 109 FK-------SQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLS 161
           FK         ++ KR         +  RK+  +    S   GSS   S++      L S
Sbjct: 98  FKISFFKVEVYVQRKRRVRKGVTNSTLFRKELREAGLHSLLGGSSSTASSNSEPDTLLQS 157

Query: 162 FLCGAAAAGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGL 221
           F+       E  + Q  SS E +I +  S D  +ER  +  L D+DR+EK RR  FVQGL
Sbjct: 158 FIFNPVVGDEALSEQSSSSIEAAIVKDSSKDDFVERKPQVQLSDEDRVEKTRRFDFVQGL 217

Query: 222 LMSTFLDPDL 231
           LMST LD +L
Sbjct: 218 LMSTILDDEL 227


>Medtr7g112400.1 | drought-induced protein | HC |
           chr7:46179418-46180661 | 20130731
          Length = 149

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 2/62 (3%)

Query: 49  LRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNI 108
           L+  + CPFC E FD++ LCCHID DH +EAK+GV  CPVC+  +G +MV HIA QHG+I
Sbjct: 58  LKEEFLCPFCSEYFDIVGLCCHIDQDHPLEAKNGV--CPVCSSRMGLDMVAHIALQHGSI 115

Query: 109 FK 110
            K
Sbjct: 116 LK 117


>Medtr7g112403.1 | protein dehydration-induced-like protein | HC |
           chr7:46181869-46184515 | 20130731
          Length = 123

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 69/119 (57%), Gaps = 2/119 (1%)

Query: 112 QLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLL-SFLCGAAAAG 170
           Q K K  +  SY TLS  RK+  + + +S   GSS + S+S  A DPLL SF+   A   
Sbjct: 2   QRKRKSRKGGSYSTLSLLRKELREGNLQSLLGGSSRIVSSSNVAPDPLLSSFILPVADEF 61

Query: 171 EHQNVQPDSSSELSIEETHSDDTVLERDVE-PSLPDKDRIEKARRSKFVQGLLMSTFLD 228
                QP+  +        SD+T+ +++VE P+L  KD+ EK +R +FVQGLL+STFLD
Sbjct: 62  SSSQCQPNFLTGTRQSRKSSDETLSKKNVETPTLSVKDKEEKEKRCEFVQGLLLSTFLD 120