Miyakogusa Predicted Gene

Lj1g3v4863070.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4863070.1 Non Characterized Hit- tr|G7L9V5|G7L9V5_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,51.52,2e-18,
,gene.g37606.t1.1
         (236 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g109280.1 | hypothetical protein | HC | chr7:44668037-4466...   247   6e-66
Medtr8g023290.1 | hypothetical protein | LC | chr8:8373882-83744...    98   9e-21

>Medtr7g109280.1 | hypothetical protein | HC |
           chr7:44668037-44667119 | 20130731
          Length = 234

 Score =  247 bits (631), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 132/239 (55%), Positives = 171/239 (71%), Gaps = 9/239 (3%)

Query: 1   MQSRVLTNTATTWCRALSSTTNRFTLSRGFSAANRSRTADPAIHSGELESGPDVNKETAR 60
           M  ++  +      +A SS+     + R F  A+RS TADP IHSG+ + G    + + +
Sbjct: 2   MHLKLTLDVTRKSYQAFSSSA--IFIKREF--ASRSHTADPDIHSGQQKPGYTNYRNSPQ 57

Query: 61  GTTSTNDDGTNVKFVETEHMPSKEDTLKSPLDASQKLKSEGVNQRLDPSMQQKRKNGSKV 120
           GT S  D  TN KF ETE      ++ KSP  +S KL+S GVN+RLDP++QQKRK G+K 
Sbjct: 58  GT-SRGDSDTNTKFAETEKEEGIFESPKSPYQSSPKLRSTGVNERLDPNIQQKRKQGTKA 116

Query: 121 -LEEVSCAGLDGSPWPEGEENIR--EEQNKDAKEYFRHHKASPLSELEFVDSRKPVSRVK 177
            LE++SCAGLDG+PWPE EEN R  +EQN+D KEY++HHKASP+SE EF D+RKP  RV 
Sbjct: 117 ALEDLSCAGLDGTPWPE-EENDRTKDEQNEDNKEYYKHHKASPISEFEFADTRKPAERVM 175

Query: 178 DGTVDSGRGVEVIGWLPEQQDTAEDSLMRAAEIWRRNAMRGDPDAPHSRVLRALRGEEF 236
            GTVD+ +  +VIGWLPEQ +TAE++L+RAAE+WR+ AMRGDPDAPHSRVLR LRGE+F
Sbjct: 176 HGTVDAKQNGDVIGWLPEQLETAEETLLRAAEMWRQRAMRGDPDAPHSRVLRTLRGEDF 234


>Medtr8g023290.1 | hypothetical protein | LC | chr8:8373882-8374406
           | 20130731
          Length = 153

 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 68/99 (68%), Gaps = 4/99 (4%)

Query: 102 VNQRLDPSMQQKRKNGSKV--LEEVSCAGLDGSPWPEGEENIREEQN--KDAKEYFRHHK 157
           VN+RLDP++QQKRK G+K   LE+VSCAGLDG+   + ++    ++N  K      +HHK
Sbjct: 54  VNERLDPNIQQKRKQGTKAAALEDVSCAGLDGTLGLKKKKKSGAKRNRMKITNNTIKHHK 113

Query: 158 ASPLSELEFVDSRKPVSRVKDGTVDSGRGVEVIGWLPEQ 196
           ASP+SE +F  +RKPV RV  GT D+    +VIGWLPEQ
Sbjct: 114 ASPISEFKFAYTRKPVERVMHGTADAKHDRDVIGWLPEQ 152