Miyakogusa Predicted Gene
- Lj1g3v4862840.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4862840.1 Non Characterized Hit- tr|I1NBC1|I1NBC1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26300
PE,83.75,0,DNA-binding domain of DNA mismatch repair MU,DNA mismatch
repair protein MutS, core; ATPase domain o,CUFF.33463.1
(554 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC | c... 945 0.0
Medtr6g086270.1 | DNA mismatch repair protein msh6 | HC | chr6:3... 255 1e-67
Medtr1g100683.2 | DNA mismatch repair MSH3-like protein | HC | c... 211 2e-54
Medtr1g100683.1 | DNA mismatch repair MSH3-like protein | HC | c... 211 2e-54
Medtr4g111945.1 | DNA mismatch repair MSH3-like protein | HC | c... 167 3e-41
Medtr5g093110.1 | DNA mismatch repair protein MutS | HC | chr5:4... 123 4e-28
Medtr1g045670.1 | DNA mismatch repair protein | HC | chr1:171673... 108 1e-23
Medtr5g068600.6 | DNA mismatch repair MUTS family protein | HC |... 82 1e-15
Medtr5g068600.5 | DNA mismatch repair MUTS family protein | HC |... 82 1e-15
Medtr5g068600.2 | DNA mismatch repair MUTS family protein | HC |... 82 1e-15
Medtr5g068600.1 | DNA mismatch repair MUTS family protein | HC |... 82 1e-15
Medtr5g068600.4 | DNA mismatch repair MUTS family protein | HC |... 82 1e-15
Medtr5g068600.3 | DNA mismatch repair MUTS family protein | HC |... 82 1e-15
Medtr5g068600.7 | DNA mismatch repair MUTS family protein | HC |... 81 2e-15
Medtr4g088920.1 | DNA mismatch repair protein MutS2 | HC | chr4:... 77 4e-14
>Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC |
chr7:44767037-44759016 | 20130731
Length = 1280
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/554 (81%), Positives = 501/554 (90%), Gaps = 3/554 (0%)
Query: 1 MERLLARIFSASDAIGRNANKVVLYEDAAKKQLQEFISALRGCELMAQACSSLRVILNDV 60
MERLLAR+ S+ DA GRNANKVVLYED++KKQLQEFISALRG ELMAQAC SL VILN+V
Sbjct: 730 MERLLARVLSSRDASGRNANKVVLYEDSSKKQLQEFISALRGLELMAQACLSLGVILNNV 789
Query: 61 KSRHLSHVLTPGKGLPDVTLDLNHFKDAFDWVEANKSGRVVPHEGVDVEFDSACKAVKEI 120
KSR LSH+LTPGKGLPDV++DLNHFKDAFDWVEAN SGR++PHEGVD E+DSA KAV EI
Sbjct: 790 KSRQLSHLLTPGKGLPDVSMDLNHFKDAFDWVEANNSGRIIPHEGVDKEYDSAGKAVNEI 849
Query: 121 ESSLLKHLKEQRKLLGDTSITYVNVGKETYLLEVPENLCGNIPQYYELRSSKKGFFRYWT 180
ESSLL HLKEQRKLLG TSI+YV +GK+TYLLEVPENL NIP+ YE RSSKKGF RYWT
Sbjct: 850 ESSLLDHLKEQRKLLGSTSISYVGIGKDTYLLEVPENLSQNIPRDYERRSSKKGFVRYWT 909
Query: 181 PDIKTFLRELSQAESEKESLLKSTLQRLIGRFCEHHTRWKQLVSATAELDVLISLAIASD 240
PDIK FL+ELS AESE+E+LLKST QR+I RFCEHHT+WKQLVSATAELDVLI+LAIASD
Sbjct: 910 PDIKIFLKELSHAESERETLLKSTFQRMIERFCEHHTQWKQLVSATAELDVLINLAIASD 969
Query: 241 YNEGPTCRPSFAGTLCTKEAPYLYAKSLGHPVLRSDSLGKGSFVPNDITIGGPNDASFIL 300
Y EGPTCRPSF GTLCT EAPY+YAKSLGHPVLRSD+LGK +FVPNDITIGGP+ ASFIL
Sbjct: 970 YYEGPTCRPSFVGTLCTNEAPYIYAKSLGHPVLRSDTLGKSAFVPNDITIGGPDQASFIL 1029
Query: 301 LTGPNMGGKSTLLRQVCLAVVMAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFF 360
LTGPNMGGKSTLLRQVCLAV++AQVGADVP+ESF+LSPVDRIFVRMGA+DNIMAGQSTF
Sbjct: 1030 LTGPNMGGKSTLLRQVCLAVILAQVGADVPSESFELSPVDRIFVRMGARDNIMAGQSTFL 1089
Query: 361 TELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLDYLVRKVRCRGLFSTHYHR 420
TELSETATMLSSAT NSLVALDELGRGTSTSDGQAIAESVL++LVR V+CRGLFSTHYHR
Sbjct: 1090 TELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHLVRSVQCRGLFSTHYHR 1149
Query: 421 LAIDYLQDPQVRLCHMACQVGGGITGLDEVTFLYKLTTGACPKSYGVNVARLAGLPTSLL 480
LAIDYL+DP+V L HMACQVG G GLDEVTFLY+L+ GACPKSYGVNVARLAGLPTS+L
Sbjct: 1150 LAIDYLKDPKVCLAHMACQVGSGNEGLDEVTFLYRLSAGACPKSYGVNVARLAGLPTSVL 1209
Query: 481 QKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAIIQNLNKAATNLNCQDSICDSSL 540
QKA AKS+EFEATYGK R +E SSNQ+WVDEII ++Q LN AA NL+C++ + D S+
Sbjct: 1210 QKADAKSREFEATYGKYR---TEPNSSNQSWVDEIIVLVQKLNNAANNLSCEEMVSDHSI 1266
Query: 541 SELQGEARELLQRC 554
+LQ EARELL+RC
Sbjct: 1267 VKLQREARELLERC 1280
>Medtr6g086270.1 | DNA mismatch repair protein msh6 | HC |
chr6:32387897-32378956 | 20130731
Length = 1155
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 201/329 (61%), Gaps = 16/329 (4%)
Query: 204 TLQRLIGRFCEHHTRWKQLVSATAELDVLISLAIASDYNEGPTCRPSFAGTLCTKE---- 259
TL L F E +W ++V A +DVL S A+ S ++ G RP T +
Sbjct: 797 TLTILAELFLEKANQWFEVVHAINCIDVLRSFAVTSSFSCGTMSRPVIVPTSKSTSKDSG 856
Query: 260 APYLYAKSLGHPVLRSDSLGKGSFVPNDITIG---GPNDASFILLTGPNMGGKSTLLRQV 316
AP L K L HP ++ G+ VPND+ +G G + +LLTGPNMGGKSTLLR
Sbjct: 857 APVLKMKGLWHPFALGET-GREP-VPNDMILGENEGGHHPRTLLLTGPNMGGKSTLLRAT 914
Query: 317 CLAVVMAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFFTELSETATMLSSATSN 376
CLAV+MAQ+G VP E+ LS VD IF R+GA D IMAG+STFF E +ETA++L +AT +
Sbjct: 915 CLAVIMAQLGCYVPCENCVLSVVDIIFTRLGATDRIMAGESTFFIECTETASVLHNATQD 974
Query: 377 SLVALDELGRGTSTSDGQAIAESVLDYLVRKVRCRGLFSTHYHRLAIDYLQDPQVRLCHM 436
SLV LDELGRGTST DG AIA +V +L+ KV CR LF+THYH L ++ P+V + HM
Sbjct: 975 SLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHM 1034
Query: 437 ACQVGGGITGL----DEVTFLYKLTTGACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEA 492
AC L E+ FLY+L GACP+SYG+ VA +AG+P + A+ S++ +
Sbjct: 1035 ACAFKSKSDTLSKQDQELVFLYRLAPGACPESYGLQVALMAGIPEKTVNVASKASQQMKI 1094
Query: 493 TYGKCRKAS---SEAYSSNQNWVDEIIAI 518
+ GK ++S SE S ++ W+ +++I
Sbjct: 1095 SIGKNFRSSEQRSEFSSLHEEWLKTLMSI 1123
>Medtr1g100683.2 | DNA mismatch repair MSH3-like protein | HC |
chr1:45623820-45633367 | 20130731
Length = 1072
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 204/367 (55%), Gaps = 16/367 (4%)
Query: 132 RKLLGDTSITYVNVGKETYLLEVPENLCGNIPQYYELRSSKKGFFRYWTPDIKTFLRELS 191
RK LG + Y++V T+L+E+ ++ +P + +S K RY P++ T L ELS
Sbjct: 641 RKRLGMRKLEYMSVSGVTHLIELSTDV--KVPLNWVKVNSTKKTIRYHPPEVVTALDELS 698
Query: 192 QAESEKESLLKSTLQRLIGRFCEHHTRWKQLVSATAELDVLISLAIASDYNEGPTCRPSF 251
A+ + ++ + F +H+ ++ V A A LD L SLAI S N+G RP F
Sbjct: 699 LAKEKLTVACRAAWDSFLRDFSKHYAEFQASVQALASLDCLHSLAILSR-NKG-YVRPVF 756
Query: 252 AGTLCTKEAPYLYAKSLGHPVLRSDSLGKGSFVPNDITIGGPNDASFILLTGPNMGGKST 311
E + S HPVL +S+ + +FVPND ++ + I+ TGPNMGGKS
Sbjct: 757 VDD---HEPVQMQICSGRHPVL--ESILQNNFVPNDTSMHADREYCQIV-TGPNMGGKSC 810
Query: 312 LLRQVCLAVVMAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFFTELSETATMLS 371
+RQ L +MAQVG+ VPA S L +D I+ RMGA D+I G+STF ELSET+ +L
Sbjct: 811 YVRQASLIALMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILH 870
Query: 372 SATSNSLVALDELGRGTSTSDGQAIAESVLDYLVRKVRCRGLFSTHYHRLAIDYLQDP-Q 430
T SLV LDELGRGTST DG AIA + L YL+++ + LF THY ++A + P
Sbjct: 871 RCTGRSLVILDELGRGTSTHDGMAIAYATLHYLLKQKKSLVLFVTHYPKIASLETEFPGS 930
Query: 431 VRLCHMAC-----QVGGGITGLDEVTFLYKLTTGACPKSYGVNVARLAGLPTSLLQKAAA 485
V HM+ V +++T+LYKL G +S+G VA+LA LP+ + +A
Sbjct: 931 VAAYHMSHLTSHDDVSKNSNDHEDITYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIV 990
Query: 486 KSKEFEA 492
+ + EA
Sbjct: 991 MASKLEA 997
>Medtr1g100683.1 | DNA mismatch repair MSH3-like protein | HC |
chr1:45623796-45633355 | 20130731
Length = 1072
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 204/367 (55%), Gaps = 16/367 (4%)
Query: 132 RKLLGDTSITYVNVGKETYLLEVPENLCGNIPQYYELRSSKKGFFRYWTPDIKTFLRELS 191
RK LG + Y++V T+L+E+ ++ +P + +S K RY P++ T L ELS
Sbjct: 641 RKRLGMRKLEYMSVSGVTHLIELSTDV--KVPLNWVKVNSTKKTIRYHPPEVVTALDELS 698
Query: 192 QAESEKESLLKSTLQRLIGRFCEHHTRWKQLVSATAELDVLISLAIASDYNEGPTCRPSF 251
A+ + ++ + F +H+ ++ V A A LD L SLAI S N+G RP F
Sbjct: 699 LAKEKLTVACRAAWDSFLRDFSKHYAEFQASVQALASLDCLHSLAILSR-NKG-YVRPVF 756
Query: 252 AGTLCTKEAPYLYAKSLGHPVLRSDSLGKGSFVPNDITIGGPNDASFILLTGPNMGGKST 311
E + S HPVL +S+ + +FVPND ++ + I+ TGPNMGGKS
Sbjct: 757 VDD---HEPVQMQICSGRHPVL--ESILQNNFVPNDTSMHADREYCQIV-TGPNMGGKSC 810
Query: 312 LLRQVCLAVVMAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFFTELSETATMLS 371
+RQ L +MAQVG+ VPA S L +D I+ RMGA D+I G+STF ELSET+ +L
Sbjct: 811 YVRQASLIALMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILH 870
Query: 372 SATSNSLVALDELGRGTSTSDGQAIAESVLDYLVRKVRCRGLFSTHYHRLAIDYLQDP-Q 430
T SLV LDELGRGTST DG AIA + L YL+++ + LF THY ++A + P
Sbjct: 871 RCTGRSLVILDELGRGTSTHDGMAIAYATLHYLLKQKKSLVLFVTHYPKIASLETEFPGS 930
Query: 431 VRLCHMAC-----QVGGGITGLDEVTFLYKLTTGACPKSYGVNVARLAGLPTSLLQKAAA 485
V HM+ V +++T+LYKL G +S+G VA+LA LP+ + +A
Sbjct: 931 VAAYHMSHLTSHDDVSKNSNDHEDITYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIV 990
Query: 486 KSKEFEA 492
+ + EA
Sbjct: 991 MASKLEA 997
>Medtr4g111945.1 | DNA mismatch repair MSH3-like protein | HC |
chr4:46289309-46300169 | 20130731
Length = 941
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 174/338 (51%), Gaps = 22/338 (6%)
Query: 164 QYYELRSSKKGFFRYWTPDIKTFLRELSQAESEKESLLKSTLQRLIGRFCEHHTRWKQLV 223
Q+ L + K G ++ +K + Q E +S K + +++G ++ L
Sbjct: 536 QFIVLETRKDGV-KFTNTKLKKLGDKYQQILEEYKSYQKQLVVKVVGISASFSEVFESLA 594
Query: 224 SATAELDVLISLAIASDYNEGPTCRPSFAGTLCTKEAPYLYAKSLGHPVLRSDSLGKGSF 283
+ELDVL+S A + P RP + E + S HP + + +F
Sbjct: 595 ELISELDVLLSFADLASSCPTPYTRPDITSS---DEGDIILEGS-RHPCVEAQDWV--NF 648
Query: 284 VPNDIT-IGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPAESFDLSPVDRI 342
+PND I G + F ++TGPNMGGKST +RQV + ++MAQVG VP + +S D I
Sbjct: 649 IPNDCKLIRGK--SWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCI 706
Query: 343 FVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLD 402
F R+GA D + G STF E+ ET+++L AT SL+ +DELGRGTST DG +A ++ +
Sbjct: 707 FARVGAGDCQLRGVSTFMQEMLETSSILKGATDKSLIIIDELGRGTSTYDGFGLAWAICE 766
Query: 403 YLVRKVRCRGLFSTHYHRLAI---------DYLQDPQVRLCHMACQVGGGITGLDEVTFL 453
++V ++ LF+TH+H L + Q V H++ + L T L
Sbjct: 767 HIVDVIKAPTLFATHFHELTALADENGSNDTHKQIVGVANYHVSAHIDASTRKL---TML 823
Query: 454 YKLTTGACPKSYGVNVARLAGLPTSLLQKAAAKSKEFE 491
YK+ GAC +S+G++VA A P S++ A K+ E E
Sbjct: 824 YKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELE 861
>Medtr5g093110.1 | DNA mismatch repair protein MutS | HC |
chr5:40657110-40644297 | 20130731
Length = 810
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 178/374 (47%), Gaps = 23/374 (6%)
Query: 171 SKKGFFRY-WTPDIKTFLRELSQAESEKESLLKSTLQRLIGRFCEHHTRWKQLVSATAEL 229
+K+ F+R T ++ L ++ + E + L + F H T+ + + AEL
Sbjct: 454 TKRYFYRMPKTRELDNLLGDIYHKILDMERAITRDLFSHVSLFSTHLTK---VATFAAEL 510
Query: 230 DVLISLAIASDYNEGPTCRPSFAGTLCTKEAPYLYAKSLGHPVLRSDSLGKGSFVPNDIT 289
D +S+A+ + N RP E L K+ G VL+ + +F+PND
Sbjct: 511 DCFLSMALVARQNN--YVRPVLT------EENLLDIKN-GRHVLQE--MTVDTFIPNDTK 559
Query: 290 IGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPAESFDLSPVDRIFVRMGAK 349
I +D ++TGPN GKS ++QV + V +A +G+ VPA++ + DRIF G++
Sbjct: 560 IF--HDGRVNIITGPNFSGKSIYIKQVAIIVFLAHIGSFVPADAATVGLTDRIFCATGSR 617
Query: 350 DNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLDYLVRKVR 409
+ A QSTF +L + ML ATS SL +DE G+GT T DG + +++ +
Sbjct: 618 -LMTAEQSTFMIDLHQIGMMLRHATSRSLCLVDEFGKGTLTEDGIGLLAGAINHFITCDE 676
Query: 410 CRGLF-STHYHRL--AIDYLQDPQVRLCHMAC-QVGGGITGLDEVTFLYKLTTGACPKSY 465
+F TH L + Q++ M+ + T ++++ FLY+L G SY
Sbjct: 677 PPKVFVCTHLMDLLHGCSLTKSEQIKFYTMSILRPEDDSTHIEDIVFLYRLVPGHVHHSY 736
Query: 466 GVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAIIQ-NLNK 524
G++ A LAG+P ++++AA R + + + + D + +++ +++
Sbjct: 737 GLHCALLAGVPDEIIKRAAVVLDAVSKNNCVERLCNENISAQDDEYKDAMEKLLKFDVDN 796
Query: 525 AATNLNCQDSICDS 538
NL +D C+S
Sbjct: 797 GDLNLFFEDIFCNS 810
>Medtr1g045670.1 | DNA mismatch repair protein | HC |
chr1:17167339-17152759 | 20130731
Length = 1138
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 111/222 (50%), Gaps = 15/222 (6%)
Query: 297 SFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQ 356
S LLTGPN GGKS+LLR +C A ++ G VPAES + D I + M + D+ +
Sbjct: 763 SLFLLTGPNGGGKSSLLRSICAAALLGICGLMVPAESAVIPYFDSIMLHMKSYDSPADHK 822
Query: 357 STFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLDYLVRKVRCRGLFST 416
S+F E+SE ++++ T SLV +DE+ RGT T+ G IA S+++ L R C G+ ST
Sbjct: 823 SSFQVEMSELRSIIAGTTKRSLVLVDEICRGTETAKGTCIAGSIIETLDRS-GCLGIVST 881
Query: 417 HYHRLAIDYLQDPQVRLCHMACQVGGGITGLD-EVTFLYKLTTGACPKSYGVNVARLAGL 475
H H + L H A G T +D + + LT G C +S A+ G+
Sbjct: 882 HLHDIFTLPLNITNT--VHKAM----GTTCIDGQTKPTWMLTDGVCKESLAFETAKREGI 935
Query: 476 PTSLLQKAA-------AKSKEFEATYGKCRKASSEAYSSNQN 510
P ++Q+A AK Y K + SS +N N
Sbjct: 936 PEIIIQRAEDLYLSVYAKKTLSAENYAKQEELSSYINGNNSN 977
>Medtr5g068600.6 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066879 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 34/245 (13%)
Query: 284 VPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPA-ESFDLSPVDRI 342
VP D + N I++TGPN GGK+ L+ V LA +MA+ G V A ES + D +
Sbjct: 418 VPVDFLVS--NKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSV 475
Query: 343 FVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLD 402
F +G + ++ STF L + + + +T SLV LDE+G GT+ +G A+ S+L+
Sbjct: 476 FADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLE 535
Query: 403 YLVRKVRCRGLFSTHYHRL-AIDYLQDPQVRLCHMACQVGGGITGLDEVTF--LYKLTTG 459
L + +TH+ L + Y + C DEV YK+ G
Sbjct: 536 SLAHGGCLLTIATTHHGELKTLKYSNEAFENAC----------MEFDEVNLKPTYKVLWG 585
Query: 460 ACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAII 519
+S +N+A GLP+ ++ A+ + Y S+ +DE+I +
Sbjct: 586 IPGRSNAINIAERLGLPSVVID------------------AARKLYGSSSAEIDEVITDM 627
Query: 520 QNLNK 524
+ L +
Sbjct: 628 EKLKQ 632
>Medtr5g068600.5 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 34/245 (13%)
Query: 284 VPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPA-ESFDLSPVDRI 342
VP D + N I++TGPN GGK+ L+ V LA +MA+ G V A ES + D +
Sbjct: 418 VPVDFLVS--NKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSV 475
Query: 343 FVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLD 402
F +G + ++ STF L + + + +T SLV LDE+G GT+ +G A+ S+L+
Sbjct: 476 FADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLE 535
Query: 403 YLVRKVRCRGLFSTHYHRL-AIDYLQDPQVRLCHMACQVGGGITGLDEVTF--LYKLTTG 459
L + +TH+ L + Y + C DEV YK+ G
Sbjct: 536 SLAHGGCLLTIATTHHGELKTLKYSNEAFENAC----------MEFDEVNLKPTYKVLWG 585
Query: 460 ACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAII 519
+S +N+A GLP+ ++ A+ + Y S+ +DE+I +
Sbjct: 586 IPGRSNAINIAERLGLPSVVID------------------AARKLYGSSSAEIDEVITDM 627
Query: 520 QNLNK 524
+ L +
Sbjct: 628 EKLKQ 632
>Medtr5g068600.2 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066879 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 34/245 (13%)
Query: 284 VPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPA-ESFDLSPVDRI 342
VP D + N I++TGPN GGK+ L+ V LA +MA+ G V A ES + D +
Sbjct: 418 VPVDFLVS--NKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSV 475
Query: 343 FVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLD 402
F +G + ++ STF L + + + +T SLV LDE+G GT+ +G A+ S+L+
Sbjct: 476 FADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLE 535
Query: 403 YLVRKVRCRGLFSTHYHRL-AIDYLQDPQVRLCHMACQVGGGITGLDEVTF--LYKLTTG 459
L + +TH+ L + Y + C DEV YK+ G
Sbjct: 536 SLAHGGCLLTIATTHHGELKTLKYSNEAFENAC----------MEFDEVNLKPTYKVLWG 585
Query: 460 ACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAII 519
+S +N+A GLP+ ++ A+ + Y S+ +DE+I +
Sbjct: 586 IPGRSNAINIAERLGLPSVVID------------------AARKLYGSSSAEIDEVITDM 627
Query: 520 QNLNK 524
+ L +
Sbjct: 628 EKLKQ 632
>Medtr5g068600.1 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066750 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 34/245 (13%)
Query: 284 VPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPA-ESFDLSPVDRI 342
VP D + N I++TGPN GGK+ L+ V LA +MA+ G V A ES + D +
Sbjct: 418 VPVDFLVS--NKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSV 475
Query: 343 FVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLD 402
F +G + ++ STF L + + + +T SLV LDE+G GT+ +G A+ S+L+
Sbjct: 476 FADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLE 535
Query: 403 YLVRKVRCRGLFSTHYHRL-AIDYLQDPQVRLCHMACQVGGGITGLDEVTF--LYKLTTG 459
L + +TH+ L + Y + C DEV YK+ G
Sbjct: 536 SLAHGGCLLTIATTHHGELKTLKYSNEAFENAC----------MEFDEVNLKPTYKVLWG 585
Query: 460 ACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAII 519
+S +N+A GLP+ ++ A+ + Y S+ +DE+I +
Sbjct: 586 IPGRSNAINIAERLGLPSVVID------------------AARKLYGSSSAEIDEVITDM 627
Query: 520 QNLNK 524
+ L +
Sbjct: 628 EKLKQ 632
>Medtr5g068600.4 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 34/245 (13%)
Query: 284 VPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPA-ESFDLSPVDRI 342
VP D + N I++TGPN GGK+ L+ V LA +MA+ G V A ES + D +
Sbjct: 418 VPVDFLVS--NKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSV 475
Query: 343 FVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLD 402
F +G + ++ STF L + + + +T SLV LDE+G GT+ +G A+ S+L+
Sbjct: 476 FADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLE 535
Query: 403 YLVRKVRCRGLFSTHYHRL-AIDYLQDPQVRLCHMACQVGGGITGLDEVTF--LYKLTTG 459
L + +TH+ L + Y + C DEV YK+ G
Sbjct: 536 SLAHGGCLLTIATTHHGELKTLKYSNEAFENAC----------MEFDEVNLKPTYKVLWG 585
Query: 460 ACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAII 519
+S +N+A GLP+ ++ A+ + Y S+ +DE+I +
Sbjct: 586 IPGRSNAINIAERLGLPSVVID------------------AARKLYGSSSAEIDEVITDM 627
Query: 520 QNLNK 524
+ L +
Sbjct: 628 EKLKQ 632
>Medtr5g068600.3 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 34/245 (13%)
Query: 284 VPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPA-ESFDLSPVDRI 342
VP D + N I++TGPN GGK+ L+ V LA +MA+ G V A ES + D +
Sbjct: 418 VPVDFLVS--NKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSV 475
Query: 343 FVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLD 402
F +G + ++ STF L + + + +T SLV LDE+G GT+ +G A+ S+L+
Sbjct: 476 FADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLE 535
Query: 403 YLVRKVRCRGLFSTHYHRL-AIDYLQDPQVRLCHMACQVGGGITGLDEVTF--LYKLTTG 459
L + +TH+ L + Y + C DEV YK+ G
Sbjct: 536 SLAHGGCLLTIATTHHGELKTLKYSNEAFENAC----------MEFDEVNLKPTYKVLWG 585
Query: 460 ACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAII 519
+S +N+A GLP+ ++ A+ + Y S+ +DE+I +
Sbjct: 586 IPGRSNAINIAERLGLPSVVID------------------AARKLYGSSSAEIDEVITDM 627
Query: 520 QNLNK 524
+ L +
Sbjct: 628 EKLKQ 632
>Medtr5g068600.7 | DNA mismatch repair MUTS family protein | HC |
chr5:29049681-29066879 | 20130731
Length = 699
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 34/245 (13%)
Query: 284 VPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPA-ESFDLSPVDRI 342
VP D + N I++TGPN GGK+ L+ V LA +MA+ G V A ES + D +
Sbjct: 318 VPVDFLVS--NKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESVQIPWFDSV 375
Query: 343 FVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTSDGQAIAESVLD 402
F +G + ++ STF L + + + +T SLV LDE+G GT+ +G A+ S+L+
Sbjct: 376 FADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNPLEGAALGMSLLE 435
Query: 403 YLVRKVRCRGLFSTHYHRL-AIDYLQDPQVRLCHMACQVGGGITGLDEVTF--LYKLTTG 459
L + +TH+ L + Y + C DEV YK+ G
Sbjct: 436 SLAHGGCLLTIATTHHGELKTLKYSNEAFENAC----------MEFDEVNLKPTYKVLWG 485
Query: 460 ACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQNWVDEIIAII 519
+S +N+A GLP+ ++ A+ + Y S+ +DE+I +
Sbjct: 486 IPGRSNAINIAERLGLPSVVID------------------AARKLYGSSSAEIDEVITDM 527
Query: 520 QNLNK 524
+ L +
Sbjct: 528 EKLKQ 532
>Medtr4g088920.1 | DNA mismatch repair protein MutS2 | HC |
chr4:35517782-35512675 | 20130731
Length = 913
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 21/282 (7%)
Query: 274 RSDSLGKGSF-VPNDITIGGPNDASFILLTGPNMGGKSTLLRQVCLAVVMAQVGADVPAE 332
+S S G F VP D I + ++++GPN GGK+ ++ + LA +M++ G +PA+
Sbjct: 403 KSASQGITDFPVPVDFKIR--SGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAK 460
Query: 333 -SFDLSPVDRIFVRMGAKDNIMAGQSTFFTELSETATMLSSATSNSLVALDELGRGTSTS 391
S L D I V +G ++ STF +S L A+ SLV +DE+G GT S
Sbjct: 461 KSPKLPWFDLILVDIGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPS 520
Query: 392 DGQAIAESVLDYLVRKVRCRGLFSTHYHRLAIDYLQDPQVRLCHMACQVGGGITGLDEVT 451
+G A++ S+L YL V + +THY L+ +D M L+ +
Sbjct: 521 EGVALSASILQYLREHVNL-AVVTTHYADLSTMKEKDTCFENAAMEF-------SLETLQ 572
Query: 452 FLYKLTTGACPKSYGVNVARLAGLPTSLLQKAAAKSKEFEATYGKCRKASSEAYSSNQNW 511
Y++ G S +++A+ G +++ A ++ + + R+ Y S Q
Sbjct: 573 PTYRVLWGCTGDSNALSIAQSIGFDKNIIDHAQKWVEKLKPEQQQERRGM--LYQSLQEE 630
Query: 512 VDEIIAIIQNLNKAATNLNCQDSICDSSLSELQGEARELLQR 553
+ + A KAA+ I + SE+QGEA +L +R
Sbjct: 631 KNRLKA---QAEKAAS---IHAEIMN-VYSEIQGEAEDLDRR 665