Miyakogusa Predicted Gene
- Lj1g3v4862710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4862710.1 Non Characterized Hit- tr|J9K7Q5|J9K7Q5_ACYPI
Uncharacterized protein OS=Acyrthosiphon pisum PE=4
SV,31.06,3e-19,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL,CUFF.33455.1
(185 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g087100.1 | transport complex protein | HC | chr1:38991336... 282 1e-76
Medtr1g087100.2 | transport complex protein | HC | chr1:38992676... 281 3e-76
>Medtr1g087100.1 | transport complex protein | HC |
chr1:38991336-38999735 | 20130731
Length = 773
Score = 282 bits (721), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/186 (80%), Positives = 163/186 (87%), Gaps = 3/186 (1%)
Query: 1 MLVDLFLQELEVIGNEVKEILPQGIRKHHRVDSTGSNASSTRSNSFREEKLTRSNTLKGR 60
M VD FLQELEVI NEVK+ILPQGIRKH R DS ++ S+RSN REEKL RSNT + R
Sbjct: 590 MFVDFFLQELEVIHNEVKQILPQGIRKHRRTDSN-GSSVSSRSNPLREEKLGRSNTQRAR 648
Query: 61 SQQLLETHLAKLFKQKVEIFTKVEYTQESVIMTIVKLCLKSLQEFVRFQTFNRSGFQQIQ 120
SQ LLETHLAKLFKQKVEIFTK+EYTQESV+ TIVK CLKS+QEFVR QTFNRSGFQQIQ
Sbjct: 649 SQ-LLETHLAKLFKQKVEIFTKIEYTQESVVTTIVKFCLKSVQEFVRLQTFNRSGFQQIQ 707
Query: 121 LDIQFLRTPIKEIVEDEAAMDFLLDEVIVAATERCLDPISLEPPILERLIGAKLAKTKEQ 180
LDIQFLRTPI+EIVEDEAA+DFLLDEVIVA ERCLDPI LEPPIL++L+ AKLAKTKEQ
Sbjct: 708 LDIQFLRTPIREIVEDEAAVDFLLDEVIVATAERCLDPIPLEPPILDKLVQAKLAKTKEQ 767
Query: 181 D-TISS 185
+ TISS
Sbjct: 768 NTTISS 773
>Medtr1g087100.2 | transport complex protein | HC |
chr1:38992676-38999735 | 20130731
Length = 583
Score = 281 bits (719), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/186 (80%), Positives = 163/186 (87%), Gaps = 3/186 (1%)
Query: 1 MLVDLFLQELEVIGNEVKEILPQGIRKHHRVDSTGSNASSTRSNSFREEKLTRSNTLKGR 60
M VD FLQELEVI NEVK+ILPQGIRKH R DS ++ S+RSN REEKL RSNT + R
Sbjct: 400 MFVDFFLQELEVIHNEVKQILPQGIRKHRRTDSN-GSSVSSRSNPLREEKLGRSNTQRAR 458
Query: 61 SQQLLETHLAKLFKQKVEIFTKVEYTQESVIMTIVKLCLKSLQEFVRFQTFNRSGFQQIQ 120
SQ LLETHLAKLFKQKVEIFTK+EYTQESV+ TIVK CLKS+QEFVR QTFNRSGFQQIQ
Sbjct: 459 SQ-LLETHLAKLFKQKVEIFTKIEYTQESVVTTIVKFCLKSVQEFVRLQTFNRSGFQQIQ 517
Query: 121 LDIQFLRTPIKEIVEDEAAMDFLLDEVIVAATERCLDPISLEPPILERLIGAKLAKTKEQ 180
LDIQFLRTPI+EIVEDEAA+DFLLDEVIVA ERCLDPI LEPPIL++L+ AKLAKTKEQ
Sbjct: 518 LDIQFLRTPIREIVEDEAAVDFLLDEVIVATAERCLDPIPLEPPILDKLVQAKLAKTKEQ 577
Query: 181 D-TISS 185
+ TISS
Sbjct: 578 NTTISS 583