Miyakogusa Predicted Gene
- Lj1g3v4848440.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4848440.1 tr|G7KTM4|G7KTM4_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_7g109720 PE,89.77,0,seg,NULL;
DEAD-like helicases superfamily,Helicase, superfamily 1/2, ATP-binding
domain; helicase su,CUFF.33437.1
(704 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 1058 0.0
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 424 e-118
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 424 e-118
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 424 e-118
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 424 e-118
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 424 e-118
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 424 e-118
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 424 e-118
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 424 e-118
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 424 e-118
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 424 e-118
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 414 e-115
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 410 e-114
Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like prote... 348 1e-95
Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like prote... 348 1e-95
Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like prote... 348 1e-95
Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like prote... 348 1e-95
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 338 1e-92
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 338 1e-92
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 336 5e-92
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 336 5e-92
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 318 2e-86
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 312 7e-85
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 312 7e-85
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 312 7e-85
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 311 2e-84
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 305 8e-83
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 303 3e-82
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 303 3e-82
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 303 3e-82
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 303 4e-82
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 300 4e-81
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 297 2e-80
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 291 2e-78
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 285 1e-76
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 239 6e-63
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 233 4e-61
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 233 4e-61
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 233 6e-61
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 225 9e-59
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 223 6e-58
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 219 1e-56
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 218 2e-56
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 214 2e-55
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 214 3e-55
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 210 5e-54
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 209 6e-54
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 209 7e-54
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 205 1e-52
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 205 1e-52
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 203 5e-52
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 202 8e-52
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 201 2e-51
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 201 2e-51
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 190 4e-48
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 186 7e-47
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 185 2e-46
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 184 2e-46
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 183 4e-46
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 183 4e-46
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 183 7e-46
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 182 7e-46
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 179 7e-45
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 178 1e-44
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 172 7e-43
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 172 1e-42
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 171 2e-42
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 171 3e-42
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 170 5e-42
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 168 1e-41
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 168 1e-41
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 167 3e-41
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 167 4e-41
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 166 5e-41
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 163 5e-40
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 158 1e-38
Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family pro... 158 2e-38
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 145 9e-35
Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 140 6e-33
Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC | chr... 137 3e-32
Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC | chr... 137 3e-32
Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC | chr... 137 4e-32
Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC | chr... 137 4e-32
Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC | chr... 137 4e-32
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 134 3e-31
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 130 5e-30
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 129 1e-29
Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC | sc... 129 1e-29
Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like prote... 128 2e-29
Medtr4g077370.1 | DEAD-box helicase family protein | LC | chr4:2... 121 2e-27
Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 120 5e-27
Medtr8g032230.1 | DEAD-box helicase family protein | HC | chr8:1... 114 4e-25
Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 111 2e-24
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 111 3e-24
Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like prote... 107 3e-23
Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like prote... 107 3e-23
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 107 6e-23
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 106 7e-23
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 103 5e-22
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 101 3e-21
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 97 5e-20
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 84 4e-16
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 80 8e-15
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 80 9e-15
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 75 2e-13
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 72 2e-12
Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like prote... 66 1e-10
Medtr2g031570.1 | DEAD-box helicase family protein | LC | chr2:1... 64 4e-10
Medtr1g050730.1 | DEAD-box helicase family protein | HC | chr1:1... 64 6e-10
Medtr8g079452.1 | helicase family carboxy-terminal domain protei... 62 2e-09
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 59 1e-08
Medtr1g103260.1 | fanconi anemia, complementation group M protei... 55 2e-07
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 54 6e-07
Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like prote... 53 1e-06
Medtr6g040070.1 | DEAD/DEAH-box helicase | HC | chr6:14397151-14... 52 1e-06
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 1058 bits (2735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/638 (82%), Positives = 549/638 (86%)
Query: 66 PMESFLKAKKDLGLTLASDALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNPIVIDKKKIE 125
PMESFL+AKKDLGLTLASDALHAGYDSDEEVYAAAKAVDAG+++YDSDDNPIV+DKKKIE
Sbjct: 117 PMESFLRAKKDLGLTLASDALHAGYDSDEEVYAAAKAVDAGLIDYDSDDNPIVLDKKKIE 176
Query: 126 PIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDC 185
PI PLDH+ +DYEPF+KDFYEE PSISGMSEQDV DYRKSLAIRVSGF+VPKPVKTFEDC
Sbjct: 177 PIAPLDHNEIDYEPFNKDFYEESPSISGMSEQDVIDYRKSLAIRVSGFEVPKPVKTFEDC 236
Query: 186 GFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ 245
GF P +M AIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ
Sbjct: 237 GFAPQIMGAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ 296
Query: 246 PELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCE 305
PELQKEEGPIGVICAPTRELA QIYLE+KKFAK+YGIRVSAVYGGMSKLEQFKELKAGCE
Sbjct: 297 PELQKEEGPIGVICAPTRELAHQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCE 356
Query: 306 IVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFS 365
IVVATPGRLIDMLKMKAL M RATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT LFS
Sbjct: 357 IVVATPGRLIDMLKMKALAMLRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFS 416
Query: 366 ATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQ 425
ATMPRKVEKLAREILSDP+RV VGEVGMANEDITQVVQV+PSDS IDQ
Sbjct: 417 ATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLHEMIDQ 476
Query: 426 GDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVA 485
GDTLVFASKKATVD+IE QL QRGFKVAALHGDKDQ+SRMDILQKFKSG YHVLIATDVA
Sbjct: 477 GDTLVFASKKATVDEIEVQLGQRGFKVAALHGDKDQSSRMDILQKFKSGAYHVLIATDVA 536
Query: 486 ARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSL 545
ARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDK+GVAYTLITQKEARFAGELVNSL
Sbjct: 537 ARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSL 596
Query: 546 IAAGQNVSTELMDLAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGLGIGYNS 605
+AAGQNVSTELMDLAM FGLGIGY++
Sbjct: 597 VAAGQNVSTELMDLAMKDGRFRSKRDARKGGGRKGKGRGGGAGGKGVRGVDFGLGIGYST 656
Query: 606 ESSSTPPNTAPSRSAAVNSLRTGMMSQFKSSFVAAXXXXXXXXXXXXXXMAANKRPTLAG 665
+S++ P N P RSAAVNSLRTGMMSQF+SSFVAA MA NKRPTLAG
Sbjct: 657 DSNNAPSNAVPGRSAAVNSLRTGMMSQFRSSFVAASSTSQNEGFSNNTSMAVNKRPTLAG 716
Query: 666 FVSGGSIGGDINRRQFVASTSPAQSAVNSTSQSSGVNP 703
FVSGGSIGGDIN Q AS +PA SAVNSTSQSSGVNP
Sbjct: 717 FVSGGSIGGDINTHQQTASYNPAPSAVNSTSQSSGVNP 754
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/455 (48%), Positives = 298/455 (65%), Gaps = 7/455 (1%)
Query: 111 DSDDNPIV--IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAI 168
D DD+ + + K K E + +DHS +DY PF K+FY E +S M+ ++V YRK L +
Sbjct: 432 DEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEVSKMTVEEVAFYRKQLEL 491
Query: 169 RVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGS 228
++ G DVPKPVK++ G ++ IKK +EKP IQ QALPV++SGRD IG+AKTGS
Sbjct: 492 KIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGS 551
Query: 229 GKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
GKT AFVLPM+ HI DQP + +GPIG+I APTREL QQI+ + +KF K GIR VY
Sbjct: 552 GKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY 611
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFE 345
GG +Q ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFE
Sbjct: 612 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 671
Query: 346 PQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV 405
PQ+ IV IRPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DI Q+V+V
Sbjct: 672 PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVR 731
Query: 406 PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRM 465
P ++ ++G LVF + D + L + G+ +LHG KDQ R
Sbjct: 732 P-ENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRE 790
Query: 466 DILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGV 525
+ FKS V ++L+AT +AARGLD+K ++ V+NFD+ + +VHR+GRTGRAG ++G
Sbjct: 791 STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAG-RKGC 849
Query: 526 AYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A T I++++AR+A +LV +L + Q V +L LA
Sbjct: 850 AITFISEEDARYAPDLVKALELSEQIVPDDLKSLA 884
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/455 (48%), Positives = 298/455 (65%), Gaps = 7/455 (1%)
Query: 111 DSDDNPIV--IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAI 168
D DD+ + + K K E + +DHS +DY PF K+FY E +S M+ ++V YRK L +
Sbjct: 432 DEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEVSKMTVEEVAFYRKQLEL 491
Query: 169 RVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGS 228
++ G DVPKPVK++ G ++ IKK +EKP IQ QALPV++SGRD IG+AKTGS
Sbjct: 492 KIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGS 551
Query: 229 GKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
GKT AFVLPM+ HI DQP + +GPIG+I APTREL QQI+ + +KF K GIR VY
Sbjct: 552 GKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY 611
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFE 345
GG +Q ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFE
Sbjct: 612 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 671
Query: 346 PQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV 405
PQ+ IV IRPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DI Q+V+V
Sbjct: 672 PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVR 731
Query: 406 PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRM 465
P ++ ++G LVF + D + L + G+ +LHG KDQ R
Sbjct: 732 P-ENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRE 790
Query: 466 DILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGV 525
+ FKS V ++L+AT +AARGLD+K ++ V+NFD+ + +VHR+GRTGRAG ++G
Sbjct: 791 STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAG-RKGC 849
Query: 526 AYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A T I++++AR+A +LV +L + Q V +L LA
Sbjct: 850 AITFISEEDARYAPDLVKALELSEQIVPDDLKSLA 884
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/455 (48%), Positives = 298/455 (65%), Gaps = 7/455 (1%)
Query: 111 DSDDNPIV--IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAI 168
D DD+ + + K K E + +DHS +DY PF K+FY E +S M+ ++V YRK L +
Sbjct: 432 DEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEVSKMTVEEVAFYRKQLEL 491
Query: 169 RVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGS 228
++ G DVPKPVK++ G ++ IKK +EKP IQ QALPV++SGRD IG+AKTGS
Sbjct: 492 KIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGS 551
Query: 229 GKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
GKT AFVLPM+ HI DQP + +GPIG+I APTREL QQI+ + +KF K GIR VY
Sbjct: 552 GKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY 611
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFE 345
GG +Q ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFE
Sbjct: 612 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 671
Query: 346 PQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV 405
PQ+ IV IRPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DI Q+V+V
Sbjct: 672 PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVR 731
Query: 406 PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRM 465
P ++ ++G LVF + D + L + G+ +LHG KDQ R
Sbjct: 732 P-ENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRE 790
Query: 466 DILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGV 525
+ FKS V ++L+AT +AARGLD+K ++ V+NFD+ + +VHR+GRTGRAG ++G
Sbjct: 791 STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAG-RKGC 849
Query: 526 AYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A T I++++AR+A +LV +L + Q V +L LA
Sbjct: 850 AITFISEEDARYAPDLVKALELSEQIVPDDLKSLA 884
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/455 (48%), Positives = 298/455 (65%), Gaps = 7/455 (1%)
Query: 111 DSDDNPIV--IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAI 168
D DD+ + + K K E + +DHS +DY PF K+FY E +S M+ ++V YRK L +
Sbjct: 432 DEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEVSKMTVEEVAFYRKQLEL 491
Query: 169 RVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGS 228
++ G DVPKPVK++ G ++ IKK +EKP IQ QALPV++SGRD IG+AKTGS
Sbjct: 492 KIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGS 551
Query: 229 GKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
GKT AFVLPM+ HI DQP + +GPIG+I APTREL QQI+ + +KF K GIR VY
Sbjct: 552 GKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY 611
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFE 345
GG +Q ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFE
Sbjct: 612 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 671
Query: 346 PQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV 405
PQ+ IV IRPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DI Q+V+V
Sbjct: 672 PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVR 731
Query: 406 PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRM 465
P ++ ++G LVF + D + L + G+ +LHG KDQ R
Sbjct: 732 P-ENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRE 790
Query: 466 DILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGV 525
+ FKS V ++L+AT +AARGLD+K ++ V+NFD+ + +VHR+GRTGRAG ++G
Sbjct: 791 STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAG-RKGC 849
Query: 526 AYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A T I++++AR+A +LV +L + Q V +L LA
Sbjct: 850 AITFISEEDARYAPDLVKALELSEQIVPDDLKSLA 884
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/455 (48%), Positives = 298/455 (65%), Gaps = 7/455 (1%)
Query: 111 DSDDNPIV--IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAI 168
D DD+ + + K K E + +DHS +DY PF K+FY E +S M+ ++V YRK L +
Sbjct: 432 DEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEVSKMTVEEVAFYRKQLEL 491
Query: 169 RVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGS 228
++ G DVPKPVK++ G ++ IKK +EKP IQ QALPV++SGRD IG+AKTGS
Sbjct: 492 KIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGS 551
Query: 229 GKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
GKT AFVLPM+ HI DQP + +GPIG+I APTREL QQI+ + +KF K GIR VY
Sbjct: 552 GKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY 611
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFE 345
GG +Q ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFE
Sbjct: 612 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 671
Query: 346 PQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV 405
PQ+ IV IRPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DI Q+V+V
Sbjct: 672 PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVR 731
Query: 406 PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRM 465
P ++ ++G LVF + D + L + G+ +LHG KDQ R
Sbjct: 732 P-ENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRE 790
Query: 466 DILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGV 525
+ FKS V ++L+AT +AARGLD+K ++ V+NFD+ + +VHR+GRTGRAG ++G
Sbjct: 791 STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAG-RKGC 849
Query: 526 AYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A T I++++AR+A +LV +L + Q V +L LA
Sbjct: 850 AITFISEEDARYAPDLVKALELSEQIVPDDLKSLA 884
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/455 (48%), Positives = 298/455 (65%), Gaps = 7/455 (1%)
Query: 111 DSDDNPIV--IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAI 168
D DD+ + + K K E + +DHS +DY PF K+FY E +S M+ ++V YRK L +
Sbjct: 432 DEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEVSKMTVEEVAFYRKQLEL 491
Query: 169 RVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGS 228
++ G DVPKPVK++ G ++ IKK +EKP IQ QALPV++SGRD IG+AKTGS
Sbjct: 492 KIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGS 551
Query: 229 GKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
GKT AFVLPM+ HI DQP + +GPIG+I APTREL QQI+ + +KF K GIR VY
Sbjct: 552 GKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY 611
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFE 345
GG +Q ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFE
Sbjct: 612 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 671
Query: 346 PQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV 405
PQ+ IV IRPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DI Q+V+V
Sbjct: 672 PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVR 731
Query: 406 PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRM 465
P ++ ++G LVF + D + L + G+ +LHG KDQ R
Sbjct: 732 P-ENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRE 790
Query: 466 DILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGV 525
+ FKS V ++L+AT +AARGLD+K ++ V+NFD+ + +VHR+GRTGRAG ++G
Sbjct: 791 STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAG-RKGC 849
Query: 526 AYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A T I++++AR+A +LV +L + Q V +L LA
Sbjct: 850 AITFISEEDARYAPDLVKALELSEQIVPDDLKSLA 884
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/455 (48%), Positives = 298/455 (65%), Gaps = 7/455 (1%)
Query: 111 DSDDNPIV--IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAI 168
D DD+ + + K K E + +DHS +DY PF K+FY E +S M+ ++V YRK L +
Sbjct: 432 DEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEVSKMTVEEVAFYRKQLEL 491
Query: 169 RVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGS 228
++ G DVPKPVK++ G ++ IKK +EKP IQ QALPV++SGRD IG+AKTGS
Sbjct: 492 KIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGS 551
Query: 229 GKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
GKT AFVLPM+ HI DQP + +GPIG+I APTREL QQI+ + +KF K GIR VY
Sbjct: 552 GKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY 611
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFE 345
GG +Q ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFE
Sbjct: 612 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 671
Query: 346 PQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV 405
PQ+ IV IRPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DI Q+V+V
Sbjct: 672 PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVR 731
Query: 406 PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRM 465
P ++ ++G LVF + D + L + G+ +LHG KDQ R
Sbjct: 732 P-ENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRE 790
Query: 466 DILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGV 525
+ FKS V ++L+AT +AARGLD+K ++ V+NFD+ + +VHR+GRTGRAG ++G
Sbjct: 791 STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAG-RKGC 849
Query: 526 AYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A T I++++AR+A +LV +L + Q V +L LA
Sbjct: 850 AITFISEEDARYAPDLVKALELSEQIVPDDLKSLA 884
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/455 (48%), Positives = 298/455 (65%), Gaps = 7/455 (1%)
Query: 111 DSDDNPIV--IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAI 168
D DD+ + + K K E + +DHS +DY PF K+FY E +S M+ ++V YRK L +
Sbjct: 432 DEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEVSKMTVEEVAFYRKQLEL 491
Query: 169 RVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGS 228
++ G DVPKPVK++ G ++ IKK +EKP IQ QALPV++SGRD IG+AKTGS
Sbjct: 492 KIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGS 551
Query: 229 GKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
GKT AFVLPM+ HI DQP + +GPIG+I APTREL QQI+ + +KF K GIR VY
Sbjct: 552 GKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY 611
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFE 345
GG +Q ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFE
Sbjct: 612 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 671
Query: 346 PQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV 405
PQ+ IV IRPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DI Q+V+V
Sbjct: 672 PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVR 731
Query: 406 PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRM 465
P ++ ++G LVF + D + L + G+ +LHG KDQ R
Sbjct: 732 P-ENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRE 790
Query: 466 DILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGV 525
+ FKS V ++L+AT +AARGLD+K ++ V+NFD+ + +VHR+GRTGRAG ++G
Sbjct: 791 STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAG-RKGC 849
Query: 526 AYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A T I++++AR+A +LV +L + Q V +L LA
Sbjct: 850 AITFISEEDARYAPDLVKALELSEQIVPDDLKSLA 884
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/455 (48%), Positives = 298/455 (65%), Gaps = 7/455 (1%)
Query: 111 DSDDNPIV--IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAI 168
D DD+ + + K K E + +DHS +DY PF K+FY E +S M+ ++V YRK L +
Sbjct: 432 DEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEVSKMTVEEVAFYRKQLEL 491
Query: 169 RVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGS 228
++ G DVPKPVK++ G ++ IKK +EKP IQ QALPV++SGRD IG+AKTGS
Sbjct: 492 KIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGS 551
Query: 229 GKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
GKT AFVLPM+ HI DQP + +GPIG+I APTREL QQI+ + +KF K GIR VY
Sbjct: 552 GKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY 611
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFE 345
GG +Q ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFE
Sbjct: 612 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 671
Query: 346 PQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV 405
PQ+ IV IRPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DI Q+V+V
Sbjct: 672 PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVR 731
Query: 406 PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRM 465
P ++ ++G LVF + D + L + G+ +LHG KDQ R
Sbjct: 732 P-ENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRE 790
Query: 466 DILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGV 525
+ FKS V ++L+AT +AARGLD+K ++ V+NFD+ + +VHR+GRTGRAG ++G
Sbjct: 791 STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAG-RKGC 849
Query: 526 AYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A T I++++AR+A +LV +L + Q V +L LA
Sbjct: 850 AITFISEEDARYAPDLVKALELSEQIVPDDLKSLA 884
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/455 (48%), Positives = 298/455 (65%), Gaps = 7/455 (1%)
Query: 111 DSDDNPIV--IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAI 168
D DD+ + + K K E + +DHS +DY PF K+FY E +S M+ ++V YRK L +
Sbjct: 432 DEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEVSKMTVEEVAFYRKQLEL 491
Query: 169 RVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGS 228
++ G DVPKPVK++ G ++ IKK +EKP IQ QALPV++SGRD IG+AKTGS
Sbjct: 492 KIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGS 551
Query: 229 GKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
GKT AFVLPM+ HI DQP + +GPIG+I APTREL QQI+ + +KF K GIR VY
Sbjct: 552 GKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY 611
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFE 345
GG +Q ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFE
Sbjct: 612 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 671
Query: 346 PQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV 405
PQ+ IV IRPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DI Q+V+V
Sbjct: 672 PQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVR 731
Query: 406 PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRM 465
P ++ ++G LVF + D + L + G+ +LHG KDQ R
Sbjct: 732 P-ENERFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRE 790
Query: 466 DILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGV 525
+ FKS V ++L+AT +AARGLD+K ++ V+NFD+ + +VHR+GRTGRAG ++G
Sbjct: 791 STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAG-RKGC 849
Query: 526 AYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A T I++++AR+A +LV +L + Q V +L LA
Sbjct: 850 AITFISEEDARYAPDLVKALELSEQIVPDDLKSLA 884
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/418 (50%), Positives = 276/418 (66%), Gaps = 3/418 (0%)
Query: 140 FSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQG 199
F K+FY E PS+ M+E +VT+YR I V G DVPKPVK+F D FP V+ +KK G
Sbjct: 55 FEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAG 114
Query: 200 YEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 259
+ +PT IQ Q P+ L GRD+IGIA+TGSGKT A++LP IVH+ QP L +GPI ++
Sbjct: 115 FVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVL 174
Query: 260 APTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLK 319
APTRELA QI E+ KF S I+ + +YGG+ K Q ++L+ G EI++ATPGRLIDML+
Sbjct: 175 APTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLE 234
Query: 320 MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREI 379
+ R TYLVLDEADRM D+GF+PQ+R IV QIRPDRQT +SAT P++VE+LAR+
Sbjct: 235 SNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQF 294
Query: 380 LSDPVRVIVGEVGM-ANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATV 438
L +P +VI+G + AN I Q V +VP + +D L+F K
Sbjct: 295 LYNPYKVIIGSEDLKANHAIKQYVDIVP-EKQKYDKLVKLLEDIMDGSRILIFMDTKKGC 353
Query: 439 DDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVV 498
D I QL G+ ++HGDK QA R +L +FKSG ++ ATDVAARGLD+K +K V+
Sbjct: 354 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVI 413
Query: 499 NFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTEL 556
N+D ++ +VHRIGRTGRAG K G AYT T ARFA EL++ L AGQ VS+EL
Sbjct: 414 NYDFPGSLEDYVHRIGRTGRAGAK-GTAYTFFTAANARFAKELISILEEAGQRVSSEL 470
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/422 (49%), Positives = 274/422 (64%), Gaps = 3/422 (0%)
Query: 139 PFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQ 198
PF K+FY E P I MS+Q V YR S I V G DVPKP++ F + FP + I K
Sbjct: 160 PFQKNFYVESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKL 219
Query: 199 GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 258
G+ +PT IQ Q P+ L+GRD+IGIA+TGSGKT +++LP IVH+ QP L + EGP+ ++
Sbjct: 220 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLV 279
Query: 259 CAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDML 318
APTRELA QI E+ KF IR + +YGG K Q ++L+ G EIV+ATPGRLIDML
Sbjct: 280 LAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDML 339
Query: 319 KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLARE 378
+ + + R TYLVLDEADRM D+GFEPQ+R IV QIRPDRQT +SAT P++VE LAR+
Sbjct: 340 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQ 399
Query: 379 ILSDPVRVIVGEVGM-ANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKAT 437
L +P +V++G + AN+ I QVV+VV +D +D L+F K
Sbjct: 400 FLHNPYKVVIGSPYLKANQSINQVVEVV-TDMEKYNRLIKLLKEVMDGSRILIFTETKKG 458
Query: 438 VDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTV 497
D + QL G+ ++HGDK+QA R +L +FKSG ++ ATDVAARGLD+K IK V
Sbjct: 459 CDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCV 518
Query: 498 VNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELM 557
VN+D ++ +VHRIGRTGRAG K G AY+ T A++A +L+ L AGQ VS L
Sbjct: 519 VNYDFPSSLEDYVHRIGRTGRAGAK-GTAYSFFTSANAKYARDLIKILQDAGQIVSPALS 577
Query: 558 DL 559
L
Sbjct: 578 AL 579
>Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 348 bits (893), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/365 (48%), Positives = 235/365 (64%), Gaps = 2/365 (0%)
Query: 139 PFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQ 198
PF K+FY E P I MS+Q V YR S I V G DVPKP++ F + FP + I K
Sbjct: 160 PFQKNFYVESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKL 219
Query: 199 GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 258
G+ +PT IQ Q P+ L+GRD+IGIA+TGSGKT +++LP IVH+ QP L + EGP+ ++
Sbjct: 220 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLV 279
Query: 259 CAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDML 318
APTRELA QI E+ KF IR + +YGG K Q ++L+ G EIV+ATPGRLIDML
Sbjct: 280 LAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDML 339
Query: 319 KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLARE 378
+ + + R TYLVLDEADRM D+GFEPQ+R IV QIRPDRQT +SAT P++VE LAR+
Sbjct: 340 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQ 399
Query: 379 ILSDPVRVIVGEVGM-ANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKAT 437
L +P +V++G + AN+ I QVV+VV +D +D L+F K
Sbjct: 400 FLHNPYKVVIGSPYLKANQSINQVVEVV-TDMEKYNRLIKLLKEVMDGSRILIFTETKKG 458
Query: 438 VDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTV 497
D + QL G+ ++HGDK+QA R +L +FKSG ++ ATDVAARGL ++ +
Sbjct: 459 CDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLGRITVFRI 518
Query: 498 VNFDI 502
+ F I
Sbjct: 519 LGFLI 523
>Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 348 bits (893), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/365 (48%), Positives = 235/365 (64%), Gaps = 2/365 (0%)
Query: 139 PFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQ 198
PF K+FY E P I MS+Q V YR S I V G DVPKP++ F + FP + I K
Sbjct: 160 PFQKNFYVESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKL 219
Query: 199 GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 258
G+ +PT IQ Q P+ L+GRD+IGIA+TGSGKT +++LP IVH+ QP L + EGP+ ++
Sbjct: 220 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLV 279
Query: 259 CAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDML 318
APTRELA QI E+ KF IR + +YGG K Q ++L+ G EIV+ATPGRLIDML
Sbjct: 280 LAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDML 339
Query: 319 KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLARE 378
+ + + R TYLVLDEADRM D+GFEPQ+R IV QIRPDRQT +SAT P++VE LAR+
Sbjct: 340 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQ 399
Query: 379 ILSDPVRVIVGEVGM-ANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKAT 437
L +P +V++G + AN+ I QVV+VV +D +D L+F K
Sbjct: 400 FLHNPYKVVIGSPYLKANQSINQVVEVV-TDMEKYNRLIKLLKEVMDGSRILIFTETKKG 458
Query: 438 VDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTV 497
D + QL G+ ++HGDK+QA R +L +FKSG ++ ATDVAARGL ++ +
Sbjct: 459 CDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLGRITVFRI 518
Query: 498 VNFDI 502
+ F I
Sbjct: 519 LGFLI 523
>Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 348 bits (893), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/365 (48%), Positives = 235/365 (64%), Gaps = 2/365 (0%)
Query: 139 PFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQ 198
PF K+FY E P I MS+Q V YR S I V G DVPKP++ F + FP + I K
Sbjct: 160 PFQKNFYVESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKL 219
Query: 199 GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 258
G+ +PT IQ Q P+ L+GRD+IGIA+TGSGKT +++LP IVH+ QP L + EGP+ ++
Sbjct: 220 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLV 279
Query: 259 CAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDML 318
APTRELA QI E+ KF IR + +YGG K Q ++L+ G EIV+ATPGRLIDML
Sbjct: 280 LAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDML 339
Query: 319 KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLARE 378
+ + + R TYLVLDEADRM D+GFEPQ+R IV QIRPDRQT +SAT P++VE LAR+
Sbjct: 340 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQ 399
Query: 379 ILSDPVRVIVGEVGM-ANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKAT 437
L +P +V++G + AN+ I QVV+VV +D +D L+F K
Sbjct: 400 FLHNPYKVVIGSPYLKANQSINQVVEVV-TDMEKYNRLIKLLKEVMDGSRILIFTETKKG 458
Query: 438 VDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTV 497
D + QL G+ ++HGDK+QA R +L +FKSG ++ ATDVAARGL ++ +
Sbjct: 459 CDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLGRITVFRI 518
Query: 498 VNFDI 502
+ F I
Sbjct: 519 LGFLI 523
>Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 348 bits (893), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/365 (48%), Positives = 235/365 (64%), Gaps = 2/365 (0%)
Query: 139 PFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQ 198
PF K+FY E P I MS+Q V YR S I V G DVPKP++ F + FP + I K
Sbjct: 160 PFQKNFYVESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKL 219
Query: 199 GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 258
G+ +PT IQ Q P+ L+GRD+IGIA+TGSGKT +++LP IVH+ QP L + EGP+ ++
Sbjct: 220 GFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLV 279
Query: 259 CAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDML 318
APTRELA QI E+ KF IR + +YGG K Q ++L+ G EIV+ATPGRLIDML
Sbjct: 280 LAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDML 339
Query: 319 KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLARE 378
+ + + R TYLVLDEADRM D+GFEPQ+R IV QIRPDRQT +SAT P++VE LAR+
Sbjct: 340 EAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQ 399
Query: 379 ILSDPVRVIVGEVGM-ANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKAT 437
L +P +V++G + AN+ I QVV+VV +D +D L+F K
Sbjct: 400 FLHNPYKVVIGSPYLKANQSINQVVEVV-TDMEKYNRLIKLLKEVMDGSRILIFTETKKG 458
Query: 438 VDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTV 497
D + QL G+ ++HGDK+QA R +L +FKSG ++ ATDVAARGL ++ +
Sbjct: 459 CDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLGRITVFRI 518
Query: 498 VNFDI 502
+ F I
Sbjct: 519 LGFLI 523
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/430 (43%), Positives = 262/430 (60%), Gaps = 17/430 (3%)
Query: 140 FSKDFYEEPPSISGMSEQDVTD------YRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMS 193
S + + PP G S DVTD Y + + SG ++P P TF+ GFPP ++
Sbjct: 452 LSSNSFTRPP-YGGSS--DVTDLSAAELYCQQHEVTASGDNIPPPFMTFDSTGFPPEILQ 508
Query: 194 AIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEG 253
+ G+ PT IQ Q P+ L GRDI+ IAKTGSGKT +++P + ++ Q G
Sbjct: 509 EVCSAGFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFI-LLRQRRNNSLNG 567
Query: 254 PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGR 313
P ++ APTRELA QI E KFA+S + + +YGG K Q KEL G +IVVATPGR
Sbjct: 568 PTVLVLAPTRELATQIQEEVFKFARSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGR 627
Query: 314 LIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVE 373
L D+L+MK + + + LVLDEADRM D+GFEPQ+R IV +I P RQT +++AT P++V
Sbjct: 628 LNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVR 687
Query: 374 KLAREILSDPVRVIVGEVG--MANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDT-LV 430
K+A ++L +PV+V +G V AN+ ITQ V+VVP + ++G ++
Sbjct: 688 KIAGDLLVNPVQVNIGNVDELAANKSITQYVEVVP--QMEKQRRLEQILRSQERGSKIII 745
Query: 431 FASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLD 490
F S K D + + R F AA+HGDK Q R +L +F++G +L+ATDVAARGLD
Sbjct: 746 FCSTKKLCDQLARSIG-RTFGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDVAARGLD 804
Query: 491 IKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQ 550
IK I+ V+N+D ++ +VHRIGRTGRAG GVAYT ++++ + AG+L+ L A Q
Sbjct: 805 IKDIRVVINYDFPNGVEDYVHRIGRTGRAG-ATGVAYTFFSEQDWKHAGDLIKVLEGANQ 863
Query: 551 NVSTELMDLA 560
+V EL +A
Sbjct: 864 HVLPELRQIA 873
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/430 (43%), Positives = 262/430 (60%), Gaps = 17/430 (3%)
Query: 140 FSKDFYEEPPSISGMSEQDVTD------YRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMS 193
S + + PP G S DVTD Y + + SG ++P P TF+ GFPP ++
Sbjct: 452 LSSNSFTRPP-YGGSS--DVTDLSAAELYCQQHEVTASGDNIPPPFMTFDSTGFPPEILQ 508
Query: 194 AIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEG 253
+ G+ PT IQ Q P+ L GRDI+ IAKTGSGKT +++P + ++ Q G
Sbjct: 509 EVCSAGFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFI-LLRQRRNNSLNG 567
Query: 254 PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGR 313
P ++ APTRELA QI E KFA+S + + +YGG K Q KEL G +IVVATPGR
Sbjct: 568 PTVLVLAPTRELATQIQEEVFKFARSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGR 627
Query: 314 LIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVE 373
L D+L+MK + + + LVLDEADRM D+GFEPQ+R IV +I P RQT +++AT P++V
Sbjct: 628 LNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVR 687
Query: 374 KLAREILSDPVRVIVGEVG--MANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDT-LV 430
K+A ++L +PV+V +G V AN+ ITQ V+VVP + ++G ++
Sbjct: 688 KIAGDLLVNPVQVNIGNVDELAANKSITQYVEVVP--QMEKQRRLEQILRSQERGSKIII 745
Query: 431 FASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLD 490
F S K D + + R F AA+HGDK Q R +L +F++G +L+ATDVAARGLD
Sbjct: 746 FCSTKKLCDQLARSIG-RTFGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDVAARGLD 804
Query: 491 IKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQ 550
IK I+ V+N+D ++ +VHRIGRTGRAG GVAYT ++++ + AG+L+ L A Q
Sbjct: 805 IKDIRVVINYDFPNGVEDYVHRIGRTGRAG-ATGVAYTFFSEQDWKHAGDLIKVLEGANQ 863
Query: 551 NVSTELMDLA 560
+V EL +A
Sbjct: 864 HVLPELRQIA 873
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 336 bits (861), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/402 (43%), Positives = 256/402 (63%), Gaps = 8/402 (1%)
Query: 162 YRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDII 221
YR+ I V+G +VP PV +F GFP ++ ++ G+ PT IQ Q+ P+ L +DI+
Sbjct: 146 YRRRHEITVTGDNVPPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDIV 205
Query: 222 GIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYG 281
IAKTGSGKT ++LP +H + + + GP ++ +PTRELA QI E+ KF+K+
Sbjct: 206 AIAKTGSGKTLGYLLPAFIH-LKRTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSKTSR 264
Query: 282 IRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD 341
I + +YGG K Q K++ G +IVVATPGRL D+L+M+ +++ + +YLVLDEADRM D
Sbjct: 265 IACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLD 324
Query: 342 LGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVG--MANEDIT 399
+GFEPQ+R IV + RQT +F+AT P++V ++A ++L +PV+V +G V +AN+ IT
Sbjct: 325 MGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSIT 384
Query: 400 QVVQVVPSDSXXXXXXXXXXXXTIDQGDT-LVFASKKATVDDIETQLSQRGFKVAALHGD 458
Q ++V+ + DQG ++F S K D + L+ R F AA+HGD
Sbjct: 385 QHIEVL--TYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQLARNLT-RQFGAAAIHGD 441
Query: 459 KDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGR 518
K QA R +L +F+SG VL+ATDVAARGLD+K I+ VVNFD ++ +VHRIGRTGR
Sbjct: 442 KSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGR 501
Query: 519 AGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
AG G+AYT ++A+ A +L+ L A Q V EL +L+
Sbjct: 502 AG-ATGIAYTFFGDQDAKHASDLIKILEGANQRVPPELRELS 542
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 336 bits (861), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/402 (43%), Positives = 256/402 (63%), Gaps = 8/402 (1%)
Query: 162 YRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDII 221
YR+ I V+G +VP PV +F GFP ++ ++ G+ PT IQ Q+ P+ L +DI+
Sbjct: 146 YRRRHEITVTGDNVPPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDIV 205
Query: 222 GIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYG 281
IAKTGSGKT ++LP +H + + + GP ++ +PTRELA QI E+ KF+K+
Sbjct: 206 AIAKTGSGKTLGYLLPAFIH-LKRTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSKTSR 264
Query: 282 IRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD 341
I + +YGG K Q K++ G +IVVATPGRL D+L+M+ +++ + +YLVLDEADRM D
Sbjct: 265 IACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLD 324
Query: 342 LGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVG--MANEDIT 399
+GFEPQ+R IV + RQT +F+AT P++V ++A ++L +PV+V +G V +AN+ IT
Sbjct: 325 MGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSIT 384
Query: 400 QVVQVVPSDSXXXXXXXXXXXXTIDQGDT-LVFASKKATVDDIETQLSQRGFKVAALHGD 458
Q ++V+ + DQG ++F S K D + L+ R F AA+HGD
Sbjct: 385 QHIEVL--TYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQLARNLT-RQFGAAAIHGD 441
Query: 459 KDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGR 518
K QA R +L +F+SG VL+ATDVAARGLD+K I+ VVNFD ++ +VHRIGRTGR
Sbjct: 442 KSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGR 501
Query: 519 AGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
AG G+AYT ++A+ A +L+ L A Q V EL +L+
Sbjct: 502 AG-ATGIAYTFFGDQDAKHASDLIKILEGANQRVPPELRELS 542
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 318 bits (814), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/426 (40%), Positives = 256/426 (60%), Gaps = 23/426 (5%)
Query: 151 ISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQA 210
+ M+E+D +R+ I G +P+P++++ + ++ A++K GY+ P+ IQ A
Sbjct: 257 LEEMTERDWRIFREDYNISYKGSKIPRPMRSWVESKLSQELLKAVEKAGYKTPSPIQMAA 316
Query: 211 LPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE---EGPIGVICAPTRELAQ 267
+P+ L RD+IG+A+TGSGKTAAFVLPM+ +I P + +E EGP V+ APTRELAQ
Sbjct: 317 IPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQ 376
Query: 268 QIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTR 327
QI E+ KFA+ GI+V ++ GG S EQ +++ GCEIV+ATPGRLID L+ + + +
Sbjct: 377 QIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQ 436
Query: 328 ATYLVLDEADRMFDLGFEPQVRSIV-----GQIRPD------------RQTSLFSATMPR 370
Y+VLDEADRM D+GFEPQV ++ ++P+ R T +FSATMP
Sbjct: 437 CNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 496
Query: 371 KVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLV 430
VE+LAR+ L +PV V +G G A + I+Q V+ ++ +V
Sbjct: 497 AVERLARKYLRNPVVVTIGTAGKATDLISQ--HVIMMKESEKNYKLQRLLDELNDKTAIV 554
Query: 431 FASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLD 490
F + K + D + L + G++V LHG K Q R L+ F++ Y+VL+ATDVA RG+D
Sbjct: 555 FVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAGRGID 614
Query: 491 IKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQ 550
I + V+N+D+ +++M+ HRIGRTGRAG K GVA T +T ++ EL LI +
Sbjct: 615 IPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTLQDTDVFYELKQMLIQSNS 673
Query: 551 NVSTEL 556
V EL
Sbjct: 674 PVPPEL 679
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 312 bits (800), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 172/427 (40%), Positives = 255/427 (59%), Gaps = 25/427 (5%)
Query: 150 SISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQ 209
++ M E+D +R+ I G +P+P++++ + ++ A++K GY+ P+ IQ
Sbjct: 218 NLEEMQERDWRIFREDYNISYKGSKIPRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMA 277
Query: 210 ALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE---EGPIGVICAPTRELA 266
++P+ L RD+IG+A+TGSGKTAAFVLPM+ +I P + +E EGP V+ APTRELA
Sbjct: 278 SIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELA 337
Query: 267 QQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMT 326
QQI E+ KFA+ GI+V ++ GG S EQ +++ GCEIV+ATPGRLID L+ + +
Sbjct: 338 QQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLN 397
Query: 327 RATYLVLDEADRMFDLGFEPQVRSIV-----GQIRPD------------RQTSLFSATMP 369
+ Y+VLDEADRM D+GFEPQV ++ ++P+ R T +FSATMP
Sbjct: 398 QCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 457
Query: 370 RKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTL 429
VE+LAR+ L +PV V +G G A + I+Q V+ ++ +
Sbjct: 458 PGVERLARKYLRNPVVVTIGTAGKATDLISQ--HVIMMKESEKNYNLHRLLDQLNDKTAI 515
Query: 430 VFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGL 489
VF + K + D + L G++V LHG K Q R L+ F++ Y+VL+ATDVA RG+
Sbjct: 516 VFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAGRGI 573
Query: 490 DIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAG 549
DI + V+N+D+ +++M+ HRIGRTGRAG K GVA T +T ++ EL LI +
Sbjct: 574 DIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTLQDTDVFYELKQMLIQSN 632
Query: 550 QNVSTEL 556
V EL
Sbjct: 633 SPVPHEL 639
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 312 bits (800), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 172/427 (40%), Positives = 255/427 (59%), Gaps = 25/427 (5%)
Query: 150 SISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQ 209
++ M E+D +R+ I G +P+P++++ + ++ A++K GY+ P+ IQ
Sbjct: 218 NLEEMQERDWRIFREDYNISYKGSKIPRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMA 277
Query: 210 ALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE---EGPIGVICAPTRELA 266
++P+ L RD+IG+A+TGSGKTAAFVLPM+ +I P + +E EGP V+ APTRELA
Sbjct: 278 SIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELA 337
Query: 267 QQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMT 326
QQI E+ KFA+ GI+V ++ GG S EQ +++ GCEIV+ATPGRLID L+ + +
Sbjct: 338 QQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLN 397
Query: 327 RATYLVLDEADRMFDLGFEPQVRSIV-----GQIRPD------------RQTSLFSATMP 369
+ Y+VLDEADRM D+GFEPQV ++ ++P+ R T +FSATMP
Sbjct: 398 QCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 457
Query: 370 RKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTL 429
VE+LAR+ L +PV V +G G A + I+Q V+ ++ +
Sbjct: 458 PGVERLARKYLRNPVVVTIGTAGKATDLISQ--HVIMMKESEKNYNLHRLLDQLNDKTAI 515
Query: 430 VFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGL 489
VF + K + D + L G++V LHG K Q R L+ F++ Y+VL+ATDVA RG+
Sbjct: 516 VFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAGRGI 573
Query: 490 DIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAG 549
DI + V+N+D+ +++M+ HRIGRTGRAG K GVA T +T ++ EL LI +
Sbjct: 574 DIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTLQDTDVFYELKQMLIQSN 632
Query: 550 QNVSTEL 556
V EL
Sbjct: 633 SPVPHEL 639
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 312 bits (800), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 172/427 (40%), Positives = 255/427 (59%), Gaps = 25/427 (5%)
Query: 150 SISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQ 209
++ M E+D +R+ I G +P+P++++ + ++ A++K GY+ P+ IQ
Sbjct: 218 NLEEMQERDWRIFREDYNISYKGSKIPRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMA 277
Query: 210 ALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE---EGPIGVICAPTRELA 266
++P+ L RD+IG+A+TGSGKTAAFVLPM+ +I P + +E EGP V+ APTRELA
Sbjct: 278 SIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELA 337
Query: 267 QQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMT 326
QQI E+ KFA+ GI+V ++ GG S EQ +++ GCEIV+ATPGRLID L+ + +
Sbjct: 338 QQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLN 397
Query: 327 RATYLVLDEADRMFDLGFEPQVRSIV-----GQIRPD------------RQTSLFSATMP 369
+ Y+VLDEADRM D+GFEPQV ++ ++P+ R T +FSATMP
Sbjct: 398 QCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 457
Query: 370 RKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTL 429
VE+LAR+ L +PV V +G G A + I+Q V+ ++ +
Sbjct: 458 PGVERLARKYLRNPVVVTIGTAGKATDLISQ--HVIMMKESEKNYNLHRLLDQLNDKTAI 515
Query: 430 VFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGL 489
VF + K + D + L G++V LHG K Q R L+ F++ Y+VL+ATDVA RG+
Sbjct: 516 VFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAGRGI 573
Query: 490 DIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAG 549
DI + V+N+D+ +++M+ HRIGRTGRAG K GVA T +T ++ EL LI +
Sbjct: 574 DIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTLQDTDVFYELKQMLIQSN 632
Query: 550 QNVSTEL 556
V EL
Sbjct: 633 SPVPHEL 639
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 311 bits (796), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 240/397 (60%), Gaps = 15/397 (3%)
Query: 151 ISGMSEQDVTDYRKSLAIRVS----GFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSI 206
+S M+ + + R L + V+ P P+++F D P +M I Y +PTSI
Sbjct: 83 VSRMNPDQIEEVRHRLNLDVTVSSDSLAAPAPIESFNDMCLHPSIMKDIAYHDYTRPTSI 142
Query: 207 QCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELA 266
Q QA+P+ LSGRD++G A+TGSGKTAAF +PMI H + QP +++ +GP+ ++ APTRELA
Sbjct: 143 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELA 202
Query: 267 QQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTM 325
QQI E + F++S + + V GG + +Q EL+AG EI VATPGR ID L+ ++
Sbjct: 203 QQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSL 262
Query: 326 TRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVR 385
+R +Y+VLDEADRM D+GFEPQ+R I+ + QT LFSATMP ++E L++E L+ PV+
Sbjct: 263 SRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYLASPVQ 322
Query: 386 VIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGD--------TLVFASKKAT 437
V VG+V +++Q + V S++ Q + T+VF +K
Sbjct: 323 VKVGKVSSPTTNVSQTLVKV-SENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFVERKTR 381
Query: 438 VDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTV 497
D++ L +G +LHG + Q+ R L F+S +L+ATDVA+RGLD+ + V
Sbjct: 382 CDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHV 441
Query: 498 VNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
+N D+ K + ++HRIGRTGRAG G+A + T ++
Sbjct: 442 INLDLPKTTEDYIHRIGRTGRAGST-GIATSFYTDRD 477
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 305 bits (782), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 179/426 (42%), Positives = 243/426 (57%), Gaps = 16/426 (3%)
Query: 120 DKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPV 179
DKK + + L EP ++ P I MS++D +K I V+G ++P P+
Sbjct: 85 DKKTLMSVRELAKGITYTEPLPTG-WKPPLHIRRMSKKDCDLIQKQWHIIVNGEEIPPPI 143
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
K F+D FP P++ +K +G +PT IQ Q LPV+LSGRD+IGIA TGSGKT FVLPMI
Sbjct: 144 KNFKDMRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMI 203
Query: 240 VHIMDQPELQKE----EGPIGVICAPTRELAQQIYLESKKFA---KSYG---IRVSAVYG 289
+ M Q E+ EGP G+I P+RELA+Q Y ++F K G +R G
Sbjct: 204 MMAM-QEEIMMPIVPGEGPFGLIICPSRELARQTYEVIEEFLLPLKEAGYPELRPLLCIG 262
Query: 290 GMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVR 349
G+ Q + +K G IVVATPGRL DML K + + YL LDEADR+ DLGFE +R
Sbjct: 263 GIDMRSQLEIVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIR 322
Query: 350 SIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDS 409
+ + RQT LFSATMP K++ AR L P+ V VG G AN D+ Q V+ V ++
Sbjct: 323 EVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPIIVNVGRAGAANLDVIQEVEYVKQEA 382
Query: 410 XXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQ 469
L+F KA VDDI L +G + A+HG KDQ R +
Sbjct: 383 KIVYLLECLQKTP---PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAIS 439
Query: 470 KFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTL 529
FK+G VL+ATDVA++GLD I+ V+N+D+ +++ +VHRIGRTGR G K G+A T
Sbjct: 440 SFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG-KTGIATTF 498
Query: 530 ITQKEA 535
I + ++
Sbjct: 499 INKNQS 504
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 303 bits (777), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 251/442 (56%), Gaps = 24/442 (5%)
Query: 139 PFS-KDFYEEPPSISGMSEQDVT----DYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMS 193
PF+ +D EEP + EQ+ T D + + + SG +VP PV TF + +
Sbjct: 101 PFADQDDSEEPVT---QEEQENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQ 157
Query: 194 AIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMD-QPELQKEE 252
I++ Y KPT +Q A+P+ L GRD++ A+TGSGKTAAF P+I IM QP +
Sbjct: 158 NIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPR 217
Query: 253 G-----PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIV 307
G P+ ++ +PTREL+ QI+ E++KF+ G+RV YGG +Q +EL+ G +I+
Sbjct: 218 GVRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDIL 277
Query: 308 VATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPD----RQTSL 363
VATPGRL+D+L+ ++++ YL LDEADRM D+GFEPQ+R IV Q+ RQT L
Sbjct: 278 VATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTML 337
Query: 364 FSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTI 423
FSAT P+++++LA + LS+ + + VG VG + + I Q V+ V
Sbjct: 338 FSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRA 397
Query: 424 D-----QGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
+ Q TLVF K D +E L F +HGD+ Q R L+ FKSG +
Sbjct: 398 NGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPI 457
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFA 538
L+ATDVAARGLDI + VVNFD+ D+D +VHRIGRTGRAG K+G+A + A
Sbjct: 458 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG-KKGLATAFFNENNTSMA 516
Query: 539 GELVNSLIAAGQNVSTELMDLA 560
L + + A Q V L A
Sbjct: 517 RSLQDLMQEANQEVPAWLSRFA 538
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 303 bits (777), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 251/442 (56%), Gaps = 24/442 (5%)
Query: 139 PFS-KDFYEEPPSISGMSEQDVT----DYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMS 193
PF+ +D EEP + EQ+ T D + + + SG +VP PV TF + +
Sbjct: 101 PFADQDDSEEPVT---QEEQENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQ 157
Query: 194 AIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMD-QPELQKEE 252
I++ Y KPT +Q A+P+ L GRD++ A+TGSGKTAAF P+I IM QP +
Sbjct: 158 NIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPR 217
Query: 253 G-----PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIV 307
G P+ ++ +PTREL+ QI+ E++KF+ G+RV YGG +Q +EL+ G +I+
Sbjct: 218 GVRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDIL 277
Query: 308 VATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPD----RQTSL 363
VATPGRL+D+L+ ++++ YL LDEADRM D+GFEPQ+R IV Q+ RQT L
Sbjct: 278 VATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTML 337
Query: 364 FSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTI 423
FSAT P+++++LA + LS+ + + VG VG + + I Q V+ V
Sbjct: 338 FSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRA 397
Query: 424 D-----QGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
+ Q TLVF K D +E L F +HGD+ Q R L+ FKSG +
Sbjct: 398 NGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPI 457
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFA 538
L+ATDVAARGLDI + VVNFD+ D+D +VHRIGRTGRAG K+G+A + A
Sbjct: 458 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG-KKGLATAFFNENNTSMA 516
Query: 539 GELVNSLIAAGQNVSTELMDLA 560
L + + A Q V L A
Sbjct: 517 RSLQDLMQEANQEVPAWLSRFA 538
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 303 bits (777), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 251/441 (56%), Gaps = 25/441 (5%)
Query: 138 EPFSKDFYEEPPSISGMSEQDVT----DYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMS 193
PF D +EP +EQ+ T D + + SG +VP PV TF + +
Sbjct: 113 NPFENDV-DEP-----FTEQENTGINFDAYDDIPVETSGENVPPPVNTFAEIDLGDALNQ 166
Query: 194 AIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ-----PEL 248
IK+ Y KPT +Q A+P+ L+GRD++ A+TGSGKTAAF P+I I+ + P +
Sbjct: 167 NIKRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGILTEQYAQRPRV 226
Query: 249 QKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVV 308
+ P+ +I +PTREL+ QI+ E+KKF+ G++V YGG +Q +EL+ G +I+V
Sbjct: 227 ARTAYPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILV 286
Query: 309 ATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIR---PD-RQTSLF 364
ATPGRL+D+L+ +++ YL LDEADRM D+GFEPQ+R IV Q+ P RQT LF
Sbjct: 287 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLF 346
Query: 365 SATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQ-VVPSDSXXXXXXXXXXXXTI 423
SAT P+++++LA + L+ + + VG VG + + I Q V+ V+ SD
Sbjct: 347 SATFPKEIQRLASDFLASYIFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQREN 406
Query: 424 D----QGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVL 479
D QG TLVF K D +E L GF +HGD+ Q R L+ FK+G +L
Sbjct: 407 DVNGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREQALRSFKTGNTPIL 466
Query: 480 IATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAG 539
+ATDVAARGLDI + VVNFD+ D+D +VHRIGRTGRAG K G+A A
Sbjct: 467 VATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAG-KMGLATAFFNDSNLSMAK 525
Query: 540 ELVNSLIAAGQNVSTELMDLA 560
L + + A Q V L A
Sbjct: 526 PLADLMQEANQEVPAWLTRYA 546
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 303 bits (776), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 234/401 (58%), Gaps = 15/401 (3%)
Query: 145 YEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPT 204
++ P I MS++D +K I V+G D+P P+K F+D FP P++ +K +G +PT
Sbjct: 111 WKPPLHIRRMSKKDCDLIQKLWHIIVNGEDIPPPIKNFKDMRFPDPILKMLKTKGIVQPT 170
Query: 205 SIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE----EGPIGVICA 260
IQ Q LPV+LSGRD+IGIA TGSGKT FVLPMI+ M Q E++ EGP G+I
Sbjct: 171 PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAM-QEEIRMPIVPGEGPFGLIIC 229
Query: 261 PTRELAQQIYLESKKFA---KSYG---IRVSAVYGGMSKLEQFKELKAGCEIVVATPGRL 314
P+ ELA+Q Y ++F K G +R GG+ Q K +K G IVVATPGRL
Sbjct: 230 PSWELARQTYEVIEQFLLPLKEAGYPELRPLLCIGGIDMRSQLKIVKKGVHIVVATPGRL 289
Query: 315 IDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEK 374
DML K + + YL LDEADR+ D GFE +R + + RQT LFSATMP K++
Sbjct: 290 KDMLAKKKMNLDNCRYLTLDEADRLVDPGFEDDIREVFDHFKAQRQTLLFSATMPTKIQN 349
Query: 375 LAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASK 434
AR L P+ V VG G AN D+ Q V+ V ++ L+F
Sbjct: 350 FARSALVKPIIVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTP---PPVLIFCEN 406
Query: 435 KATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSI 494
KA VD+I L +G + A+HGDKDQ R + FK+G VL+ATD+A++GLD I
Sbjct: 407 KADVDNIHEYLLLKGVEAVAIHGDKDQEDREYAISSFKTGKKDVLVATDIASKGLDFPDI 466
Query: 495 KTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEA 535
+ V+N+D+ +++ +VHRIGRTGR G K G+A T I + +
Sbjct: 467 QHVINYDMPAEIENYVHRIGRTGRCG-KTGIATTFINKNQT 506
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 300 bits (767), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 171/386 (44%), Positives = 232/386 (60%), Gaps = 9/386 (2%)
Query: 178 PVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLP 237
PVK FED G P V+ K G+EKP+ IQ +A P +L GRD+IGIA TGSGKT AF +P
Sbjct: 101 PVKRFEDSGLPENVLECCK--GFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIP 158
Query: 238 MIVHIMDQPELQ---KEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKL 294
I+H+M++ + + K P+ ++ +PTRELAQQI KS G+ +YGG K
Sbjct: 159 AIMHVMNKRKSKGSSKGRNPLCLMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTPKG 218
Query: 295 EQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQ 354
Q LK+G +IV+ TPGR+ D+++M + +++VLDEADRM D+GFE VRSI+GQ
Sbjct: 219 AQISALKSGIDIVIGTPGRIQDLVEMGICRLQEVSFVVLDEADRMLDMGFEQIVRSILGQ 278
Query: 355 IRPDRQTSLFSATMPRKVEKLAREILS-DPVRVIVGEVGM-ANEDITQVVQVVPSDSXXX 412
RQ +FSAT P V LA+E + +PV+V+VG + AN D+ Q+V+V+
Sbjct: 279 TCSARQMVMFSATWPLAVHHLAQEFMDPNPVKVVVGSEDLSANHDVMQIVEVLDERLRDK 338
Query: 413 XXXXXXXXXTIDQGD-TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKF 471
Q + LVF K +E L Q G+K ++ GDK Q R L F
Sbjct: 339 RLLALLEKYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLF 398
Query: 472 KSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLIT 531
K+G ++IATDVAARGLDI ++ V+NF ++ +VHRIGRTGRAG K+GVA+T T
Sbjct: 399 KNGSCPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAG-KKGVAHTFFT 457
Query: 532 QKEARFAGELVNSLIAAGQNVSTELM 557
AGELVN L AGQ V +L+
Sbjct: 458 HLNKGLAGELVNVLREAGQVVPDDLL 483
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 223/360 (61%), Gaps = 11/360 (3%)
Query: 184 DCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIM 243
D P +M I Y +PTSIQ QA+P+ LSGRD++G A+TGSGKTAAF +PMI H +
Sbjct: 89 DQCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCL 148
Query: 244 DQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKELKA 302
QP +++ +GP+ ++ APTRELAQQI E + F++S + + V GG + +Q EL+A
Sbjct: 149 AQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRA 208
Query: 303 GCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTS 362
G EI VATPGR ID L+ +++R +Y+VLDEADRM D+GFEPQ+R I+ + QT
Sbjct: 209 GVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTL 268
Query: 363 LFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXT 422
LFSATMP ++E L++E L+ PV+V VG+V +++Q + V S++
Sbjct: 269 LFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTNVSQTLVKV-SENEKIDRLLDLLVEE 327
Query: 423 IDQGD--------TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
Q + T+VF +K D++ L +G +LHG + Q+ R L F+S
Sbjct: 328 ASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSS 387
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
+L+ATDVA+RGLD+ + V+N D+ K + ++HRIGRTGRAG G+A + T ++
Sbjct: 388 STSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGST-GIATSFYTDRD 446
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/415 (40%), Positives = 243/415 (58%), Gaps = 20/415 (4%)
Query: 164 KSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGI 223
+S+ + +G +VP PV F + + + I++ Y KPT +Q A+P+ ++GRD++
Sbjct: 123 ESIPVEATGENVPPPVNLFAETELHEDLKNNIERCKYVKPTPVQRYAIPIAVAGRDLMAC 182
Query: 224 AKTGSGKTAAFVLPMIVHIMDQ----PELQKEEG-------PIGVICAPTRELAQQIYLE 272
A+TGSGKTAAF P+I IM + L + G P +I +PTREL+ QI+ E
Sbjct: 183 AQTGSGKTAAFCFPIISGIMKERLASGLLPRGGGVDSDVAFPTALILSPTRELSCQIHAE 242
Query: 273 SKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLV 332
+ KFA G++++ VYGG +Q + L+ G +I+VATPGRL+D+++ + +++ + YL
Sbjct: 243 ACKFAHQTGVKIAVVYGGAPIGQQLRILERGVDILVATPGRLVDLIERERVSLKKIKYLA 302
Query: 333 LDEADRMFDLGFEPQVRSIVGQIR----PDRQTSLFSATMPRKVEKLAREILSDPVRVIV 388
LDEADRM D+GFE Q+R+IV Q+ DRQT LFSAT P ++KLA + LS+ V + V
Sbjct: 303 LDEADRMLDMGFEHQIRNIVQQMHMPPPGDRQTLLFSATFPDNIQKLASDFLSNYVFLAV 362
Query: 389 GEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGD---TLVFASKKATVDDIETQL 445
G VG + E I Q ++ V D + G TLVF K D +E L
Sbjct: 363 GRVGSSTELIVQKIESV-QDMEKRTRLVDLLRRNVVNGKLALTLVFVETKKGADALENWL 421
Query: 446 SQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKD 505
+ F A+HGDK Q R L+ FK G+ +++ATDVA+RGLDI + V+NFD+ +D
Sbjct: 422 CRINFPAIAIHGDKVQMERERALRSFKRGLTPIMVATDVASRGLDIPHVAHVINFDLPRD 481
Query: 506 MDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
+D +VHRIGRTGRAG + G+A + K A LV L A Q V L+ +
Sbjct: 482 IDDYVHRIGRTGRAG-QSGLATAFFSTKNMPMAKSLVGLLQEAKQEVPAWLVQYS 535
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 285 bits (729), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/367 (40%), Positives = 220/367 (59%), Gaps = 14/367 (3%)
Query: 151 ISGMSEQDVTDYRKSLAIRVS----GFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSI 206
+S M+ + + R L + V+ P P+++F D P +M I Y +PTSI
Sbjct: 83 VSRMNPDQIEEVRHRLNLDVTVSSDSLAAPAPIESFNDMCLHPSIMKDIAYHDYTRPTSI 142
Query: 207 QCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELA 266
Q QA+P+ LSGRD++G A+TGSGKTAAF +PMI H + QP +++ +GP+ ++ APTRELA
Sbjct: 143 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELA 202
Query: 267 QQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTM 325
QQI E + F++S + + V GG + +Q EL+AG EI VATPGR ID L+ ++
Sbjct: 203 QQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSL 262
Query: 326 TRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVR 385
+R +Y+VLDEADRM D+GFEPQ+R I+ + QT LFSATMP ++E L++E L+ PV+
Sbjct: 263 SRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYLASPVQ 322
Query: 386 VIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGD--------TLVFASKKAT 437
V VG+V +++Q + V S++ Q + T+VF +K
Sbjct: 323 VKVGKVSSPTTNVSQTLVKV-SENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFVERKTR 381
Query: 438 VDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTV 497
D++ L +G +LHG + Q+ R L F+S +L+ATDVA+RGLD+ + V
Sbjct: 382 CDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHV 441
Query: 498 VNFDIAK 504
+N D+ K
Sbjct: 442 INLDLPK 448
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 239 bits (611), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 222/405 (54%), Gaps = 13/405 (3%)
Query: 162 YRKSLAIRVSGFDVPKPVKTFEDCG----FPPPVMSAIKKQGYEKPTSIQCQALPVVLSG 217
+RK+ I VSG++VP P+++F++ P ++ + + G+ +PT IQ QA+PV+L
Sbjct: 111 FRKNHNIHVSGYNVPSPLQSFDELKTRYKCPSYLLWKLAELGFREPTPIQRQAIPVLLQD 170
Query: 218 RDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFA 277
R+ A TGSGKT AFV PM++ + + + G VI +REL+ Q Y E KK A
Sbjct: 171 RECFACAPTGSGKTLAFVCPMLMKL----KAHAKGGVRAVIICHSRELSGQTYRECKKLA 226
Query: 278 KSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEAD 337
K R+ + + + F K C+I+++TP RL +K K + ++R YLVLDE+D
Sbjct: 227 KGEKFRIKLMTKNLLRNADFS--KFSCDILISTPLRLCLAIKKKKVDLSRVEYLVLDESD 284
Query: 338 RMFDLGFEPQVRSIV-GQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANE 396
++F+ Q+ SI+ P SLFSAT+P VE ARE++ D VRVIVG MA++
Sbjct: 285 KLFEPQLFKQIDSIIKACTNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASD 344
Query: 397 DITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALH 456
I Q + S+ +++ LVF K ++ +L+ +V +H
Sbjct: 345 TIKQKLVFTGSEEGKLLAIRQSFAESLNPP-VLVFLQSKERAKELYGELAFDNIRVDVIH 403
Query: 457 GDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRT 516
D Q R + + F++G VLIATDV ARG+D K I V+N+D ++HRIGR+
Sbjct: 404 SDLSQEERENAVDNFRAGKTWVLIATDVVARGMDFKGINCVINYDFPDSASAYIHRIGRS 463
Query: 517 GRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLAM 561
GRAG + G A T T+++ F + N + ++G V + L +L +
Sbjct: 464 GRAG-RSGEAITFYTEEDIPFLRNVSNLMASSGCEVPSWLTELQL 507
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 233 bits (595), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 206/362 (56%), Gaps = 7/362 (1%)
Query: 177 KPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVL 236
K +K+F+D G P ++ A +K G++ P IQ +A+P L G+D+IG+A+TGSGKT AF L
Sbjct: 6 KEMKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFAL 65
Query: 237 PMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
P++ +++ P + + +PTRELA QI + + G++ + + GG+ ++Q
Sbjct: 66 PILHALLEAP---RPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQ 122
Query: 297 FKELKAGCEIVVATPGRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI 355
++ I+V TPGR++D LK K ++ R YLVLDEADR+ + FE + I+G I
Sbjct: 123 SVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMI 182
Query: 356 RPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXX 415
+R+T LFSATM +KVEKL R L +PV++ + + Q + +P+
Sbjct: 183 PRERRTFLFSATMTKKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLV 242
Query: 416 XXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
+ ++VF + + L G K ++G Q R+ L KFKSG
Sbjct: 243 YILTE--MAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGD 300
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEA 535
++L+ TDVA+RGLDI ++ V+N+DI + ++HR+GRT RAG + GVA +L+ Q E
Sbjct: 301 CNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAG-RSGVAISLVNQYEL 359
Query: 536 RF 537
+
Sbjct: 360 EW 361
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 233 bits (595), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 206/362 (56%), Gaps = 7/362 (1%)
Query: 177 KPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVL 236
K +K+F+D G P ++ A +K G++ P IQ +A+P L G+D+IG+A+TGSGKT AF L
Sbjct: 6 KEMKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFAL 65
Query: 237 PMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
P++ +++ P + + +PTRELA QI + + G++ + + GG+ ++Q
Sbjct: 66 PILHALLEAP---RPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQ 122
Query: 297 FKELKAGCEIVVATPGRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI 355
++ I+V TPGR++D LK K ++ R YLVLDEADR+ + FE + I+G I
Sbjct: 123 SVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMI 182
Query: 356 RPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXX 415
+R+T LFSATM +KVEKL R L +PV++ + + Q + +P+
Sbjct: 183 PRERRTFLFSATMTKKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLV 242
Query: 416 XXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
+ ++VF + + L G K ++G Q R+ L KFKSG
Sbjct: 243 YILTE--MAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGD 300
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEA 535
++L+ TDVA+RGLDI ++ V+N+DI + ++HR+GRT RAG + GVA +L+ Q E
Sbjct: 301 CNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAG-RSGVAISLVNQYEL 359
Query: 536 RF 537
+
Sbjct: 360 EW 361
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 233 bits (593), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 205/362 (56%), Gaps = 7/362 (1%)
Query: 177 KPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVL 236
K +K+F+D G P ++ A +K G++ P IQ +A+P L G+D+IG+AKTGSGKT AF L
Sbjct: 6 KEMKSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFAL 65
Query: 237 PMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
P++ +++ P + + +PTRELA QI + + G++ + + GG+ ++Q
Sbjct: 66 PILHALLEAP---RPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQ 122
Query: 297 FKELKAGCEIVVATPGRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI 355
++ I+V TPGR++D LK K ++ R YLVLDEADR+ + FE + I+G I
Sbjct: 123 SVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMI 182
Query: 356 RPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXX 415
+R+T LFSATM KVEKL R L +PV++ + + Q + +P+
Sbjct: 183 PRERRTFLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLV 242
Query: 416 XXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
+ ++VF + + L G K ++G Q R+ L KFKSG
Sbjct: 243 YILSE--MAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGD 300
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEA 535
++L+ TDVA+RGLDI ++ V+N+DI + ++HR+GRT RAG + GVA +L+ Q E
Sbjct: 301 CNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAG-RSGVAISLVNQYEL 359
Query: 536 RF 537
+
Sbjct: 360 EW 361
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 225 bits (574), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 130/361 (36%), Positives = 207/361 (57%), Gaps = 5/361 (1%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
FE G V S IK++GY+ PT IQ + +P++LSG D++ +A+TGSGKTAAF++PM+ H
Sbjct: 20 FETLGLNRDVFSGIKRKGYKVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLVPML-H 78
Query: 242 IMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
++Q Q G G+I +PTR+LAQQ +K+ +RVS + GG S QF+EL
Sbjct: 79 RLNQHVPQG--GVRGLILSPTRDLAQQTLKFTKELGHFTDLRVSLLVGGDSMESQFEELA 136
Query: 302 AGCEIVVATPGRLIDML-KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 360
+I++ATPGRL+ L ++ +++ + Y+V DEAD +F +GF Q+ I+ Q+ +RQ
Sbjct: 137 QNPDIIIATPGRLMHHLSEVDDMSLRKVEYVVFDEADCLFGMGFAEQLHQILAQLGENRQ 196
Query: 361 TSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXX 420
T LFSAT+P + + A+ L DP V + + D+ V + +
Sbjct: 197 TLLFSATLPSALAEFAKAGLRDPRLVRLDLETKISPDLKLVFFTLRQEEKYAALLYLIRE 256
Query: 421 XTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLI 480
TL+F S K V+ + + G + + +GD DQ +R + + +F+S +LI
Sbjct: 257 LIGSDEQTLIFVSTKHHVEFLNSLFQLEGIRPSVCYGDMDQDARKEHVARFRSRKTMLLI 316
Query: 481 ATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGE 540
TD+AARG+DI + V+N+D + VHR+GR RAG + G AY+ +T ++ + +
Sbjct: 317 VTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAG-RTGTAYSFLTAEDMAYLLD 375
Query: 541 L 541
L
Sbjct: 376 L 376
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 223 bits (567), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 206/382 (53%), Gaps = 14/382 (3%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
+F P++ A + GY KPT IQ +P+ L+GRDI G A TGSGKTAAF LP +
Sbjct: 152 SFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLE 211
Query: 241 HIMDQPELQKEEGPIGV-ICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKE 299
++ +P K I V I PTRELA Q+ K ++ IR + GG+S EQ
Sbjct: 212 RLLFRP---KRVHAIRVLILTPTRELAAQVQSMIKSLSQFTDIRCCLIVGGLSTKEQEVA 268
Query: 300 LKAGCEIVVATPGRLIDMLKMK-ALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPD 358
L++ +IVVATPGR+ID L+ ++ + + L+LDEADR+ +LGF +++ +V
Sbjct: 269 LRSRPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEADRLLELGFSAEIQELVRVCPKK 328
Query: 359 RQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQ-VVQVVPSDSXXXXXXXX 417
RQT LFSATM +V+ L + LS P+R+ + +T+ VV++
Sbjct: 329 RQTMLFSATMTEEVDDLIKLSLSKPLRLSADPLAKRPASLTEEVVRLRRMREVNQEAVLL 388
Query: 418 XXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYH 477
++F+ K + G K A LHG+ QA R+ L++F+
Sbjct: 389 AMCSKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLGALEEFRKQQVD 448
Query: 478 VLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE--- 534
L+ATDVAARGLDI ++TV+NF +D+ +VHR+GRT RAG + G A T +T +
Sbjct: 449 FLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAG-RAGSAVTFVTDNDRSL 507
Query: 535 ----ARFAGELVNSLIAAGQNV 552
A+ AG + S I A Q++
Sbjct: 508 LKAIAKRAGSKLKSRIVAEQSI 529
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 203/353 (57%), Gaps = 6/353 (1%)
Query: 186 GFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMD- 244
G +++A+ K+G K IQ L + GRD+IG A+TG+GKT AF +P++ I+
Sbjct: 95 GISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKF 154
Query: 245 QPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGC 304
+ K P+ ++ APTRELA+Q+ E K A + + + ++YGGM +Q +L +G
Sbjct: 155 NAKNGKRRDPLALVLAPTRELARQVEKEFKDAAPN--LEIISLYGGMPIQQQISKLGSGV 212
Query: 305 EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLF 364
+IVV TPGR+ID+LK +L + Y+VLDEAD+M +GF+ V +I+ ++ RQT +F
Sbjct: 213 DIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPSKRQTLMF 272
Query: 365 SATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTI 423
SATMP ++ L R L+ P+ + +VG+ D + + +
Sbjct: 273 SATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLITEHA 332
Query: 424 DQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATD 483
G +VF K D + + + + K ALHGD Q R L F++ ++VL+ATD
Sbjct: 333 KGGKCIVFTQTKRDADRL-SHIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATD 391
Query: 484 VAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
VA+RGLDI ++ V+++++ + ++ VHR GRTGRAG K+G A + T+ ++R
Sbjct: 392 VASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAG-KKGTAILVHTENQSR 443
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 203/353 (57%), Gaps = 6/353 (1%)
Query: 186 GFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMD- 244
G +++A+ K+G K IQ L + GRD+IG A+TG+GKT AF +P++ I+
Sbjct: 95 GISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKF 154
Query: 245 QPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGC 304
+ K P+ ++ APTRELA+Q+ E K A + + + ++YGGM +Q +L +G
Sbjct: 155 NAKNGKRRDPLALVLAPTRELARQVEKEFKDAAPN--LEIISLYGGMPIQQQISKLGSGV 212
Query: 305 EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLF 364
+IVV TPGR+ID+LK +L + Y+VLDEAD+M +GF+ V +I+ ++ RQT +F
Sbjct: 213 DIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPSKRQTLMF 272
Query: 365 SATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTI 423
SATMP ++ L R L+ P+ + +VG+ D + + +
Sbjct: 273 SATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLITEHA 332
Query: 424 DQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATD 483
G +VF K D + + + + K ALHGD Q R L F++ ++VL+ATD
Sbjct: 333 KGGKCIVFTQTKRDADRL-SHIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATD 391
Query: 484 VAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
VA+RGLDI ++ V+++++ + ++ VHR GRTGRAG K+G A + T+ ++R
Sbjct: 392 VASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAG-KKGTAILVHTENQSR 443
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 204/383 (53%), Gaps = 15/383 (3%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
+F ++ A + GY KPT IQ +P+ L+GRDI G A TGSGKTAAF LP +
Sbjct: 141 SFLQLNLSRSLLLACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLE 200
Query: 241 HIMDQPELQKEEGPIGV-ICAPTRELAQQIYLESKKFAK-SYGIRVSAVYGGMSKLEQFK 298
++ +P K I V I PTRELA Q++ ++ AK + IR + GG+ Q
Sbjct: 201 RLLFRP---KGVHAIRVLILTPTRELAVQVHSMIEELAKFTDNIRCCLIVGGVPTKGQEA 257
Query: 299 ELKAGCEIVVATPGRLIDMLKMK-ALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRP 357
L++ +IVVATPGR+ID L+ ++ + L+LDEADR+ +LGF +++ +V
Sbjct: 258 ALRSRPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIQELVRVCPK 317
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQ-VVQVVPSDSXXXXXXX 416
RQT LFSATM +V+ L + LS PVR+ +T+ VV++
Sbjct: 318 KRQTMLFSATMTEEVDDLIKLSLSKPVRLSADPSAKRPASLTEEVVRIRRMREVNHEAVL 377
Query: 417 XXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVY 476
++F+ K + G K A LHG+ QA R+D L++F+
Sbjct: 378 LAMCTKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLDALEQFRKQQV 437
Query: 477 HVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE-- 534
L+ATDVAARGLDI ++TV+NF +D+ +VHR+GRT RAG + G A T +T +
Sbjct: 438 DFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAG-RAGSAVTFVTDSDRS 496
Query: 535 -----ARFAGELVNSLIAAGQNV 552
A+ AG + S I A Q +
Sbjct: 497 LLKAIAKRAGSKLKSRIVAEQAI 519
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 201/353 (56%), Gaps = 6/353 (1%)
Query: 186 GFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMD- 244
G ++SA++K+G K IQ L + GRD+IG A+TG+GKT AF +P++ I+
Sbjct: 86 GISQDIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQF 145
Query: 245 QPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGC 304
+ + + P+ ++ APTRELA+Q+ E + + + + VYGG +Q ++L G
Sbjct: 146 NAKHGRGKDPLALVLAPTRELAKQV--EKEFYEAAPNLDTICVYGGTPISQQMRQLDYGV 203
Query: 305 EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLF 364
+I V TPGR+ID+L AL + +++LDEAD+M +GF+ V I+ ++ +RQT +F
Sbjct: 204 DIAVGTPGRIIDLLNRGALNLKEVQFVILDEADQMLQVGFQEDVEKILERLPAERQTLMF 263
Query: 365 SATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTI 423
SATMP +++L R L +P+ + +VG+ D + ++
Sbjct: 264 SATMPTWIKQLTRNYLKNPLTIDLVGDSDQKLADGISLYSILSDAYVKAGIIVPLIKEHA 323
Query: 424 DQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATD 483
G +VF K D I +S + ALHGD Q R L F++G ++VL+ATD
Sbjct: 324 KGGKCIVFTQTKRDADRISHGMS-KSIPCEALHGDISQIQRERTLAGFRNGHFNVLVATD 382
Query: 484 VAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
VA+RGLDI ++ V+++++ + ++ VHR GRTGRAG K+G A + TQ ++R
Sbjct: 383 VASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAG-KKGTAILVYTQDQSR 434
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 210 bits (534), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 197/357 (55%), Gaps = 13/357 (3%)
Query: 177 KPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVL 236
K + +FE+ G ++ I + G+EKP++IQ +A+ ++ GRD+I A++G+GKT+ L
Sbjct: 30 KAIGSFEEMGIKDDLLRGIYQYGFEKPSAIQQRAVAPIIQGRDVIAQAQSGTGKTSMIAL 89
Query: 237 PMIVHIMDQP--ELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKL 294
+ ++D E+Q +I +PTRELA Q I+ A GG S
Sbjct: 90 T-VCQVVDTSVREVQ------ALIVSPTRELASQTEKVILTIGDFINIQAHACIGGKSVG 142
Query: 295 EQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQ 354
E ++L+ G +V TPGR+ DM+K + L LVLDE+D M GF+ Q+ +
Sbjct: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
Query: 355 IRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXX 413
+ PD Q L SAT+P ++ ++ + ++DPVR++V + E I Q V V +
Sbjct: 203 LPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDT 262
Query: 414 XXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKS 473
TI Q ++F + K VD + ++ F V+A+HGD Q R I+ +F++
Sbjct: 263 LCDLYDTLTITQA--VIFCNTKRKVDWLTEKMRNNNFTVSAMHGDMPQRERDAIMGEFRA 320
Query: 474 GVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLI 530
G VLI TDV ARGLD++ + V+N+D+ + ++++HRIGR+GR G ++GVA +
Sbjct: 321 GTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFG-RKGVAINFV 376
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 209 bits (533), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 202/363 (55%), Gaps = 9/363 (2%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
+TF+ G ++ I G+EKP++IQ + + + G D+I A++G+GKTA F I
Sbjct: 24 ETFDAMGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFC-SGI 82
Query: 240 VHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKE 299
+ +D +Q + ++ APTRELAQQI + G++V A GG S E +
Sbjct: 83 LQQLDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 138
Query: 300 LKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 359
L+ G +VV TPGR+ DML+ ++L VLDEAD M GF+ Q+ I + P
Sbjct: 139 LQTGVHVVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 198
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXX 418
Q +FSATMP + ++ R+ ++ PVR++V + E I Q V V +
Sbjct: 199 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLY 258
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG V
Sbjct: 259 ETLAITQ--SVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 316
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFA 538
LI TD+ ARG+D++ + V+N+D+ + ++HRIGR+GR G ++GVA +T ++AR
Sbjct: 317 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFG-RKGVAINFVTLEDARML 375
Query: 539 GEL 541
++
Sbjct: 376 ADI 378
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 209 bits (532), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 202/363 (55%), Gaps = 9/363 (2%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
+TF+ G ++ I G+EKP++IQ + + + G D+I A++G+GKTA F I
Sbjct: 40 ETFDAMGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFC-SGI 98
Query: 240 VHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKE 299
+ +D +Q + ++ APTRELAQQI + G++V A GG S E +
Sbjct: 99 LQQLDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 154
Query: 300 LKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 359
L+ G +VV TPGR+ DML+ ++L VLDEAD M GF+ Q+ I + P
Sbjct: 155 LQTGVHVVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 214
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXX 418
Q +FSATMP + ++ R+ ++ PVR++V + E I Q V V +
Sbjct: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLY 274
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG V
Sbjct: 275 ETLAITQ--SVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 332
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFA 538
LI TD+ ARG+D++ + V+N+D+ + ++HRIGR+GR G ++GVA +T ++AR
Sbjct: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFG-RKGVAINFVTLEDARML 391
Query: 539 GEL 541
++
Sbjct: 392 ADI 394
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 200/362 (55%), Gaps = 9/362 (2%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
+F+ G ++ I G+E+P++IQ + + G D+I A++G+GKTA F I+
Sbjct: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGIL 99
Query: 241 HIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
+D +Q + ++ APTRELAQQI + G++V A GG S E + L
Sbjct: 100 QQLDYGLVQCQ----ALVLAPTRELAQQIEKVMRALGDFLGVKVHACVGGTSVREDQRIL 155
Query: 301 KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 360
+AG VV TPGR+ DML+ ++L VLDEAD M GF+ Q+ I Q+ Q
Sbjct: 156 QAGVHTVVGTPGRVFDMLRRQSLRSECIKMFVLDEADEMLSRGFKDQIYDIFQQLPGKIQ 215
Query: 361 TSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXXX 419
+FSATMP + ++ R+ ++ PVR++V + E I Q V V +
Sbjct: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYE 275
Query: 420 XXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVL 479
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG VL
Sbjct: 276 TLAITQ--SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 333
Query: 480 IATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAG 539
I TD+ ARG+D++ + V+N+D+ + ++HRIGR+GR G ++GV+ +T ++AR
Sbjct: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFG-RKGVSINFVTGEDARMLA 392
Query: 540 EL 541
++
Sbjct: 393 DI 394
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 194/367 (52%), Gaps = 14/367 (3%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
TF D G + K+ G + P +Q +P +L+GR +IGI +TGSGKTAAF LP++
Sbjct: 53 TFSDLGLSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPILQ 112
Query: 241 HIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
+ + G ++ PTRELA Q+ + + S +R++ V GGM L Q KEL
Sbjct: 113 RLAEHTF-----GVFALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQTKEL 167
Query: 301 KAGCEIVVATPGRLIDMLKMK---ALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRP 357
A +V+ATPGR+ +LK A R +LVLDEADR+ D+GF+ +++ I +
Sbjct: 168 VARPHLVIATPGRIKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQCLPE 227
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMAN-EDITQVVQVVPSDSXXXXXXX 416
+RQ FSAT ++KL RE D + G E++ Q V +P +
Sbjct: 228 NRQNLFFSATTTSNLQKL-RERYQDKLYAFEAYEGFKTVENLKQQVVFIPKNVKDVYLLH 286
Query: 417 XXXXXTIDQG--DTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
D G +VF S + L + AAL+ + QA R++ L FKSG
Sbjct: 287 ILSKME-DMGIRSAIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHDFKSG 345
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
VL+ATDVA RGLDI ++ V+N+D+ + ++HR+GRT RAG + G+A +L+TQ +
Sbjct: 346 KVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAG-RGGLALSLVTQND 404
Query: 535 ARFAGEL 541
E+
Sbjct: 405 VDLIREI 411
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 201/399 (50%), Gaps = 6/399 (1%)
Query: 163 RKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIG 222
RK L I V G V PV +F C P ++ I+ GYE PT +Q QA+P L G++++
Sbjct: 123 RKKLDIHVKGV-VSAPVMSFASCNLPDKLLQNIEAAGYEMPTPVQMQAIPAALVGKNMLV 181
Query: 223 IAKTGSGKTAAFVLPMIVHIMDQPEL--QKEEGPIGVICAPTRELAQQIYLESKKFAKSY 280
+A TGSGK+A+F++P+I + + P+ ++ PTREL+ Q+ +K K
Sbjct: 182 LADTGSGKSASFLIPIISRCASHRLMYVSDNKKPLAMVLTPTRELSIQVEEHAKLLGKGL 241
Query: 281 GIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMF 340
+ + V GG + Q ++ G E++V TPGRL+D+L + + T V+DE D M
Sbjct: 242 PFKTALVVGGDAMARQLYRIQQGVELIVGTPGRLVDLLTKNEIDLDDVTTFVVDEVDCML 301
Query: 341 DLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQ 400
GF QV I + Q ++SAT +EK+A + D V + VGE N+ + Q
Sbjct: 302 QRGFRDQVLQIFTALS-QPQVLMYSATTSDSLEKMANSMAKDTVVITVGEPNRPNKAVKQ 360
Query: 401 VVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLS-QRGFKVAALHGDK 459
+ V S + +++ + D + ++ G K ++HG+K
Sbjct: 361 LAIWVESKQKKQKLFDILKSQKHFKPPVVIYVGSRLGADLLANAITVSTGVKAVSIHGEK 420
Query: 460 DQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRA 519
R +I+Q F G + V++AT V RG+D+ ++ V+ FD+ ++ +VH+IGR R
Sbjct: 421 SMTERREIMQSFMVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRASRM 480
Query: 520 GDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMD 558
G+ EG A + + ELV+ L + + EL++
Sbjct: 481 GE-EGQAIVFVNDENKNVFPELVDVLKSGAAAIPRELIN 518
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 202 bits (515), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 199/363 (54%), Gaps = 11/363 (3%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
+F+ G ++ I G+EKP++IQ + + + G D+I A++G+GKTA F
Sbjct: 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFC----S 96
Query: 241 HIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
I+ Q + E ++ APTRELAQQI + G++V A GG S E + L
Sbjct: 97 GILQQLDYSVTECQ-ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 155
Query: 301 KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR- 359
+G +VV TPGR+ DML+ ++L VLDEAD M GF+ Q+ I Q+ P +
Sbjct: 156 SSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIF-QLLPSKI 214
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXX 418
Q +FSATMP + ++ R+ ++ PVR++V + E I Q V V +
Sbjct: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLDTLCDLY 274
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG V
Sbjct: 275 ETLAITQ--SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 332
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFA 538
LI TD+ ARG+D++ + V+N+D+ + ++HRIGR+GR G ++GVA +T + R
Sbjct: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFG-RKGVAINFVTTDDERML 391
Query: 539 GEL 541
++
Sbjct: 392 SDI 394
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 197/356 (55%), Gaps = 11/356 (3%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
+F+ G ++ I G+EKP++IQ + + G D+I A++G+GKTA F ++
Sbjct: 41 SFDAMGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGVL 99
Query: 241 HIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
+D Q + ++ APTRELAQQI + G++V A GG S E + L
Sbjct: 100 QQLDYNVTQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 155
Query: 301 KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR- 359
G +VV TPGR+ DML+ ++L VLDEAD M GF+ Q+ I Q+ P +
Sbjct: 156 STGVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDEADEMLSRGFKDQIYDIF-QLLPGKI 214
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXX 418
Q +FSATMP + ++ R+ ++ PVR++V + E I Q V V +
Sbjct: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLY 274
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG V
Sbjct: 275 ETLAITQ--SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 332
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
LI TD+ ARG+D++ + V+NFD+ + ++HRIGR+GR G ++GVA +T+++
Sbjct: 333 LITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG-RKGVAINFVTKED 387
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 197/356 (55%), Gaps = 11/356 (3%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
+F+ G ++ I G+EKP++IQ + + G D+I A++G+GKTA F ++
Sbjct: 58 SFDAMGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGVL 116
Query: 241 HIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
+D Q + ++ APTRELAQQI + G++V A GG S E + L
Sbjct: 117 QQLDYNVTQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 172
Query: 301 KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR- 359
G +VV TPGR+ DML+ ++L VLDEAD M GF+ Q+ I Q+ P +
Sbjct: 173 STGVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDEADEMLSRGFKDQIYDIF-QLLPGKI 231
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXX 418
Q +FSATMP + ++ R+ ++ PVR++V + E I Q V V +
Sbjct: 232 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLY 291
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG V
Sbjct: 292 ETLAITQ--SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 349
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
LI TD+ ARG+D++ + V+NFD+ + ++HRIGR+GR G ++GVA +T+++
Sbjct: 350 LITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG-RKGVAINFVTKED 404
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 190 bits (483), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 196/376 (52%), Gaps = 21/376 (5%)
Query: 174 DVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAA 233
D P V F P+ +K+ E IQ +L G D++G A+TG GKT A
Sbjct: 99 DDPNAVSNFR---ISEPLRMKLKENKIEALFPIQAMTFNTILDGSDLVGRARTGQGKTLA 155
Query: 234 FVLPMIVHIMDQPELQKEEGPIG-----VICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
FVLP++ + + P + G ++ PTRELA Q+Y + + + S G+ AVY
Sbjct: 156 FVLPILESLTNGPAKSVRKTGYGRVPSVIVLLPTRELANQVYADFELYGSSLGLSACAVY 215
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQV 348
GG Q +L+ G +IV+ TPGR+ D ++ + ++ + VLDEAD M +GF V
Sbjct: 216 GGAPYGAQETKLRRGVDIVIGTPGRIKDHIERGNIDLSHLKFRVLDEADEMLRMGFVDDV 275
Query: 349 RSIVGQIR--PDRQTSLFSATMPRKVEKLAREILSDPVRV--IVGEVGM-ANEDITQVVQ 403
I+G+++ QT LFSAT+P V++++ + L + +VG M A+ ++ +
Sbjct: 276 ELILGKVQDVTKVQTLLFSATLPSWVKQISTKFLKSDKKTADLVGNEKMKASTNVRHI-- 333
Query: 404 VVPSDSXXXXXXXXXXXXTIDQGD-TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQA 462
++P S G T++FA KK + ++ L ALHGD Q+
Sbjct: 334 ILPCSSTARAQLIPDIIRCYSSGGRTIIFAEKKESASELAGLLP----GARALHGDIQQS 389
Query: 463 SRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDK 522
R L+ F+SG + L+AT+VAARGLDI ++ ++ + +D++ ++HR GRTGRAG+
Sbjct: 390 QREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNT 449
Query: 523 EGVAYTLITQKEARFA 538
GVA L + + A
Sbjct: 450 -GVAVMLYDPRRSNIA 464
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 186 bits (472), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 210/424 (49%), Gaps = 38/424 (8%)
Query: 138 EPFSKDFYEE---PPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSA 194
+P S+D+ E+ PP+ + +DVT + + FED ++
Sbjct: 112 DPSSQDWKEKLKLPPADTRYRTEDVTATKGN---------------EFEDYFLKRELLMG 156
Query: 195 IKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHI-MDQPELQKEEG 253
I ++G+E+P+ IQ +++P+ L+G DI+ AK G+GKTAAF +P + I D +Q
Sbjct: 157 IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQV--- 213
Query: 254 PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGR 313
VI PTRELA Q K+ K I+V GG S + L ++V TPGR
Sbjct: 214 ---VILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR 270
Query: 314 LIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVE 373
++D+ K + + LV+DEAD++ F+P + ++ + P RQ +FSAT P V+
Sbjct: 271 ILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILMFSATFPVTVK 330
Query: 374 KLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFA 432
L P + ++ E+ + + ITQ V I+Q +++F
Sbjct: 331 DFKDRYLRKPYIINLMDELTL--KGITQFYAFVEERQKVHCLNTLFSKLQINQ--SIIFC 386
Query: 433 SKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIK 492
+ V+ + ++++ G+ +H Q R + F++G L+ TD+ RG+DI+
Sbjct: 387 NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQ 446
Query: 493 SIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNV 552
++ V+NFD K+ + ++HR+GR+GR G G+A LIT E RF +L Q +
Sbjct: 447 AVNVVINFDFPKNSETYLHRVGRSGRFGHL-GLAVNLITY-EDRF------NLYRIEQEL 498
Query: 553 STEL 556
TE+
Sbjct: 499 GTEI 502
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 192/377 (50%), Gaps = 20/377 (5%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
FED ++ I ++G+E+P+ IQ +++P+ L+G DI+ AK G+GKTAAF +P +
Sbjct: 142 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEK 201
Query: 242 I-MDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
I D +Q VI PTRELA Q K+ K I+V GG S + L
Sbjct: 202 IDQDNNIIQV------VILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRL 255
Query: 301 KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 360
++V TPGR++D+ K + + LV+DEAD++ F+P + ++ + P RQ
Sbjct: 256 YQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQ 315
Query: 361 TSLFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXX 419
+FSAT P V+ L P + ++ E+ + + ITQ V
Sbjct: 316 ILMFSATFPVTVKDFKDRYLRKPYIINLMDELTL--KGITQFYAFVEERQKVHCLNTLFS 373
Query: 420 XXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVL 479
I+Q +++F + V+ + ++++ G+ +H Q R + F++G L
Sbjct: 374 KLQINQ--SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 431
Query: 480 IATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAG 539
+ TD+ RG+DI+++ V+NFD K+ + ++HR+GR+GR G G+A LIT E RF
Sbjct: 432 VCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHL-GLAVNLITY-EDRF-- 487
Query: 540 ELVNSLIAAGQNVSTEL 556
+L Q + TE+
Sbjct: 488 ----NLYRIEQELGTEI 500
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 183/370 (49%), Gaps = 16/370 (4%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F+ C P + IK GYEK T +Q LPV+L G+D++ AKTG+GKT AF+LP I
Sbjct: 202 FDQCSVSPLSLKGIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEV 261
Query: 242 IMDQPELQKEEG--PIGV-ICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMS-KLEQ 296
++ P +++ PI V + PTRELA Q E+ K K + I V V GG LEQ
Sbjct: 262 VVKSPPSDRDQRRPPIFVLVICPTRELACQAAAEATKLLKYHPTIGVQVVIGGTRLALEQ 321
Query: 297 FKELKAGCEIVVATPGRLIDMLKMKALTMTR---ATYLVLDEADRMFDLGFEPQVRSIVG 353
+ C+I+VATPGRL D ++ A +R LVLDEAD + D+GF + I+
Sbjct: 322 KRMQANPCQILVATPGRLRDHIENTAGFASRLMGVKSLVLDEADHLLDMGFRKDIEKIIA 381
Query: 354 QIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANED----ITQVVQVVPSDS 409
I RQT +FSAT+P +V ++ L I V +ED + Q+ V P D
Sbjct: 382 AIPKQRQTLMFSATIPDEVRQVCHVALKRDFEYI-NTVQEGSEDTHSQVRQMHLVAPLDK 440
Query: 410 XXXXXXXXXXXXTIDQGD--TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDI 467
D D LVF + + L + V +H K Q+ R +
Sbjct: 441 HFPLLYAILKEHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQSYRTRV 500
Query: 468 LQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAY 527
+F+ +L+ +DV+ARG+D + VV + D ++HR+GRTGR G KEG
Sbjct: 501 SDEFRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRKG-KEGQGI 559
Query: 528 TLITQKEARF 537
L+ E F
Sbjct: 560 LLLAPWEEFF 569
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 184/369 (49%), Gaps = 14/369 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F++C P + +K GYEK T +Q LPV+L G+D++ AKTG+GKT AF+LP I
Sbjct: 107 FDECSVSPLSLKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEV 166
Query: 242 IMDQP--ELQKEEGPIGV-ICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQF 297
++ P + + + PI V + PTRELA+Q E+ K K + I V GG + +
Sbjct: 167 VVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQ 226
Query: 298 KEL-KAGCEIVVATPGRLIDMLKMK---ALTMTRATYLVLDEADRMFDLGFEPQVRSIVG 353
K + K C+I+VATPGRL D + A + V+DEADR+ D+GF + I+
Sbjct: 227 KRIQKNPCQILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEEIIT 286
Query: 354 QIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQ---VVPSDSX 410
+ RQT +FSAT+P+ V ++ L I E +QV Q + P D
Sbjct: 287 SVPKQRQTLMFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVRQMHLIAPLDKH 346
Query: 411 XXXXXXXXXXXTIDQGD--TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDIL 468
D+ D LVF + + + L + V ++ K Q R +
Sbjct: 347 FSLLSVILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFRNRVS 406
Query: 469 QKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYT 528
+F+ +L+ +DV+ARG+D + VV I D ++++HR+GRTGR G KEG
Sbjct: 407 DEFRKSKRLILVTSDVSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIG-KEGKGIL 465
Query: 529 LITQKEARF 537
L+ E F
Sbjct: 466 LLAPWEEFF 474
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 193/377 (51%), Gaps = 20/377 (5%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
FED ++ I ++G+E+P+ IQ +++P+ L+G DI+ AK G+GKTAAF +P +
Sbjct: 151 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEK 210
Query: 242 I-MDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
I D+ +Q VI PTRELA Q K+ K I+V GG S + L
Sbjct: 211 IDQDKNVIQV------VILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRL 264
Query: 301 KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 360
++V TPGR++D+ K + + LV+DEAD++ F+P + ++ + +RQ
Sbjct: 265 YQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFKPSIEQLIQFLPSNRQ 324
Query: 361 TSLFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXX 419
LFSAT P V+ L P + ++ E+ + + ITQ V
Sbjct: 325 ILLFSATFPVTVKDFNDRYLRKPYIINLMDELTL--KGITQFYAFVEERQKVHCLNTLFS 382
Query: 420 XXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVL 479
I+Q +++F + V+ + ++++ G+ +H Q R + F++G L
Sbjct: 383 KLQINQ--SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 440
Query: 480 IATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAG 539
+ TD+ RG+DI+++ V+NFD K+ + ++HR+GR+GR G G+A L+T E RF
Sbjct: 441 VCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHL-GLAVNLVTY-EDRF-- 496
Query: 540 ELVNSLIAAGQNVSTEL 556
+L Q + TE+
Sbjct: 497 ----NLYRIEQELGTEI 509
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 183 bits (464), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 180/369 (48%), Gaps = 14/369 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F+ C P + +K GYEK T +Q LPV+L G+D++ AKTG+GKT AF+LP I
Sbjct: 103 FDKCSVSPLSLKGVKDAGYEKMTIVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEV 162
Query: 242 IMDQPELQK--EEGPIGV-ICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMS-KLEQ 296
++ P + + PI V + PTRELA Q E+ K K + I V GG S EQ
Sbjct: 163 VVKSPPNNRGQNQTPILVLVVCPTRELACQAAAEATKLLKYHPTIGAQVVIGGTSLSSEQ 222
Query: 297 FKELKAGCEIVVATPGRLIDMLKMKALTMTR---ATYLVLDEADRMFDLGFEPQVRSIVG 353
+ K C+I++ATPGRL D + A ++ LVLDEAD++ D+GF + I+
Sbjct: 223 KRIQKNPCQILIATPGRLKDHIANTAGFASKLMGVKALVLDEADQLLDMGFRKDIEKIIA 282
Query: 354 QIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQ---VVPSDSX 410
+ RQT +FSAT+P V ++ L I E +QV Q + P D
Sbjct: 283 SVPKQRQTLMFSATIPDAVHQVCNVALKKDFEFINTVQEGTEETHSQVRQMHLIAPLDKH 342
Query: 411 XXXXXXXXXXXTIDQGD--TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDIL 468
D D LVF + + L + V +H K+Q+ R +
Sbjct: 343 FSLLSVILKEHIADDVDYKVLVFCTTAMVTSLVANLLGKLNLNVREIHSRKNQSYRTRVS 402
Query: 469 QKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYT 528
+F+ +L+ +DV+ARG+D + VV + D ++HR+GRTGR G KEG
Sbjct: 403 DEFRKSKRLILVTSDVSARGVDYPDVSLVVQVGLPADKQQYIHRLGRTGRKG-KEGKGIL 461
Query: 529 LITQKEARF 537
L+ E F
Sbjct: 462 LLAPWEEFF 470
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 182 bits (463), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 185/350 (52%), Gaps = 9/350 (2%)
Query: 194 AIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEG 253
AI G++ T IQ +A+P +LSG+D++G A+TGSGKT AF++P V ++ + + + G
Sbjct: 110 AIVDMGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPA-VELLHKLKFNQRSG 168
Query: 254 PIGVICAPTRELAQQIYLESKKFAKSY--GIRVSAVYGGMSKLEQFKELKAGCEIVVATP 311
VI PTRELA Q + ++K K + + V GG ++ + + L G IVVATP
Sbjct: 169 TGVVIICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIVVATP 228
Query: 312 GRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPR 370
GRL+D L+ K L++DEADR+ + FE +++ I+ + +RQT+LFSAT +
Sbjct: 229 GRLLDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSATQTK 288
Query: 371 KVEKLAR-EILSDPVRVIV--GEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGD 427
KVE LAR + P+ + V G + NE + Q VVP +
Sbjct: 289 KVEDLARLSFQTTPIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHKSKK-- 346
Query: 428 TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAAR 487
+VF S +V + ++++G + Q +R F +L+ TDVAAR
Sbjct: 347 VMVFFSSCNSVKFHADIFNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAAR 406
Query: 488 GLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARF 537
GLDI S+ ++ +D + ++HR+GRT R D +G A + +E +F
Sbjct: 407 GLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFLIPEELQF 456
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 179 bits (455), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 187/374 (50%), Gaps = 16/374 (4%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F++C P + A+ GY T +Q +LP+ L G D++ AKTG+GKTAAF+LP I
Sbjct: 289 FDECAISPLTIKALSTSGYTHMTRVQETSLPICLEGNDVMVKAKTGTGKTAAFLLPAIET 348
Query: 242 IMD--QPELQKEEGPIGV-ICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMS-KLEQ 296
++ + PI V I PTRELA QI E+K K + G+ V + GG+ K++Q
Sbjct: 349 VLKAMSSKTSHRAPPIYVLILCPTRELASQIAAEAKVLLKYHDGVGVQTLVGGVRFKVDQ 408
Query: 297 FKELKAGCEIVVATPGRLIDMLKMKALTMTRA---TYLVLDEADRMFDLGFEPQVRSIVG 353
+ C+++VATPGRL+D ++ K R L+LDEAD + DLGF + IV
Sbjct: 409 KRLESDPCQMLVATPGRLLDHIENKTGISVRVMGLQMLILDEADHLLDLGFRKDIEKIVD 468
Query: 354 QIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMAN-EDITQVVQ---VVPSDS 409
+ RQ+ LFSAT+P++V ++++ +L + V VGM E QV Q + P +S
Sbjct: 469 CLPRQRQSLLFSATIPKEVRRVSQLVLKREHKY-VDTVGMGCVETPVQVKQSYLIAPHES 527
Query: 410 XXXXXXXXXXXXTIDQGD--TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDI 467
D +VF L V +H K Q R +
Sbjct: 528 HFQIVHHILKEHISQTPDYKVIVFCITGMVTSLTYHLLRDMKLNVREIHSRKPQLYRTRV 587
Query: 468 LQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAY 527
+FK +L+++DV +RG++ + V+ I D + ++HR+GRTGR G KEG
Sbjct: 588 SDEFKESKQMILVSSDVTSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREG-KEGKGI 646
Query: 528 TLITQKEARFAGEL 541
LI E F E+
Sbjct: 647 LLIAPWEEYFLNEI 660
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 193/373 (51%), Gaps = 24/373 (6%)
Query: 188 PP---PVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMD 244
PP PV+ A+ ++ T +Q +P++ S +D+ A TGSGKT AFV+P++ +
Sbjct: 20 PPLSEPVLQALTDSNFDFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVIPLVEILRR 79
Query: 245 QPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKEL-KA 302
K +GVI +PTRELA QIY ++ F + ++ + GG+ K++ +
Sbjct: 80 NASNPKPHQVLGVIISPTRELASQIYHVAQPFISTLANVKSMLLVGGVEVKADIKKIEEE 139
Query: 303 GCEIVVATPGRLIDML-KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT 361
G +++ TPGRL D++ +M L L+LDEADR+ D+GF+ Q+ +I+ ++ R+T
Sbjct: 140 GANVLIGTPGRLHDIMNRMDILDFKSFEILILDEADRLLDMGFQKQINAIITELPKLRRT 199
Query: 362 SLFSATMPRKVEKLAREILSDPVRVIV-GEVGMANEDITQ------------VVQVVPSD 408
LFSAT + VE+LA+ L +PVRV V E AN+ + ++ + +
Sbjct: 200 GLFSATQTQAVEELAKAGLRNPVRVEVRAETKTANDSASSKKIESSKTPSGLQIEYLECE 259
Query: 409 SXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQ----RGFKVAALHGDKDQASR 464
+ +++ A VD L + +GF + +LHG Q+ R
Sbjct: 260 ADKKPSQLVDFLVKNRSKKIIIYFMTCACVDYWGLVLPRLSVLKGFSLISLHGKMKQSVR 319
Query: 465 MDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEG 524
L F S +L+ TDVAARGLDI + +V +D +D ++ VHR+GRT R G K+G
Sbjct: 320 EKALTSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARLG-KQG 378
Query: 525 VAYTLITQKEARF 537
A + KE +
Sbjct: 379 HAVVFLLPKEESY 391
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 172 bits (437), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 136/428 (31%), Positives = 213/428 (49%), Gaps = 74/428 (17%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVL-SGRDIIGIAKTGSGKTAAFVLPMIV 240
+ + P +M AI K G+++PT IQ +P G+D+IG A+TGSGKT AF LP++
Sbjct: 164 WNELRLHPRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQ 223
Query: 241 HIMDQPELQKEEGPIGV------------------ICAPTRELAQQIYLESKKFAKSYGI 282
++++ E K E GV I APTRELA Q+ K AK +
Sbjct: 224 RLLEERE--KAESISGVNGEEAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHINV 281
Query: 283 RVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDML---KMKALTMTRATYLVLDEADRM 339
RV+A+ GG+ +Q + LKA EIVVATPGRL +++ + + + ++ VLDEADRM
Sbjct: 282 RVTAIVGGILPEKQERLLKARPEIVVATPGRLWELMSSGEKHLIELHSLSFFVLDEADRM 341
Query: 340 FDLGFEPQVRSIVGQI------------------------RPDRQTSLFSATMP------ 369
G +++SI+ + + RQT +FSAT+
Sbjct: 342 VQSGHFKELQSIIDMLPMSNISSEDNSKDAQNCVTVSSIQKKKRQTLVFSATVALSADFR 401
Query: 370 RKVEK--LAREILS----DPVRVIVGEVGM----ANEDIT-------QVVQVVPSDSXXX 412
+K+++ + ++ LS D + + GM A D+T ++ + +
Sbjct: 402 KKLKRGSIQKKQLSTDGLDSIETLSERAGMRPNAAIIDLTNPSILAAKIEESFIECTEDD 461
Query: 413 XXXXXXXXXTID-QGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKF 471
T+ QG T+VF + A + I + L G V LH Q +R+ + +F
Sbjct: 462 KDAHLYYILTVHGQGRTIVFCTSIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDRF 521
Query: 472 KSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLIT 531
+ +L+ATDVAARGLDI ++TVV++ + +++VHR GRT RA EG + LI+
Sbjct: 522 RENDNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARAS-AEGCSIALIS 580
Query: 532 QKE-ARFA 538
KE ++FA
Sbjct: 581 PKETSKFA 588
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 178/363 (49%), Gaps = 8/363 (2%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
++F G AI + T IQ +++P +L G+D++G A+TGSGKT AF++P
Sbjct: 90 ESFSSLGLSERTSQAIAAMSFTHMTQIQAKSIPPLLMGKDVLGAARTGSGKTLAFLIPA- 148
Query: 240 VHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIR-VSAVYGGMSKLEQFK 298
V ++ + G ++ PTRELA Q + + + K Y + + V GG+ + + +
Sbjct: 149 VELLYNVQFTPRNGTGVIVICPTRELAIQTHAVASELMKGYHSQTLGKVIGGVGRKGEAE 208
Query: 299 ELKAGCEIVVATPGRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRP 357
+ G +++ATPGRL+D L+ K L++DEADR+ + FE +++ I+ +
Sbjct: 209 RIVKGVNLLIATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILESNFEEEMKQILNILPK 268
Query: 358 DRQTSLFSATMPRKVEKLAREILSDP---VRVIVGEVGMANEDITQVVQVVPSDSXXXXX 414
RQT+LFSAT +KVE LAR P V V +G + E + Q VVP
Sbjct: 269 KRQTALFSATQTKKVEDLARLSFQTPPVYVDVDIGREKVTVEGLEQGYVVVPC--AKRFV 326
Query: 415 XXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
+VF S +V L G +HG + Q SR F
Sbjct: 327 VLYSFLKRYQSKKVMVFFSSCNSVKFHADLLKFIGLDCLNIHGKQKQNSRTSTFFNFCKA 386
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
+L+ TDVAARGLDI ++ +V FD + ++HR+GRT R +G A + +E
Sbjct: 387 EKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEE 446
Query: 535 ARF 537
+F
Sbjct: 447 LQF 449
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 187/365 (51%), Gaps = 30/365 (8%)
Query: 190 PVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMD----- 244
P+ +K++G E IQ ++L G D++G A+TG GKT AFVLP++ + +
Sbjct: 53 PLREKLKEKGIESLFPIQAMTFDIILQGCDLVGRARTGQGKTLAFVLPILESVTNGKAKE 112
Query: 245 -QPELQKEEG---------------PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
+ ++ G P ++ PTRELA Q+ + + + + G+ +Y
Sbjct: 113 TNAKTKETNGNARESRKGGYGGPPKPSVLVLLPTRELACQVNADFEVYGGAMGLTSCCLY 172
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQV 348
GG Q +L+ G +IV+ TPGR+ D + ++ +++ + VLDEAD M +GF V
Sbjct: 173 GGAPYKAQEIKLERGVDIVIGTPGRIKDHIVRGSIDLSQLKFRVLDEADEMLRMGFVEDV 232
Query: 349 RSIVGQIRP--DRQTSLFSATMPRKVEKLAREILSDPVRV--IVGEVGMANEDITQVVQV 404
I+G+++ QT LFSAT+P V+ +A+ L + + +VG M + +
Sbjct: 233 ELILGKVKNVDQVQTLLFSATLPEWVKNIAKRFLKEDKQTADLVGNTKMKASTSVRHYIL 292
Query: 405 VPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASR 464
+ + +G T++F K + +QL++ ALHGD QA R
Sbjct: 293 PCTGAARSQLIPDIIRCYSSEGRTIIFTETKESA----SQLAELLPGARALHGDIQQAQR 348
Query: 465 MDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEG 524
L F+ G + L+AT+VAARGLDI ++ ++ + +D++ ++HR GRTGRAG+ G
Sbjct: 349 EVTLSGFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNT-G 407
Query: 525 VAYTL 529
VA L
Sbjct: 408 VAVML 412
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 164/321 (51%), Gaps = 9/321 (2%)
Query: 204 TSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTR 263
T IQ +LP L GRD++G AKTGSGKT AF++P ++ + + E+G +I +PTR
Sbjct: 99 TKIQRASLPHALCGRDVLGAAKTGSGKTLAFIIP-VLEKLHRERWGTEDGVGSIIISPTR 157
Query: 264 ELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLID-MLKMKA 322
ELA QI+ + + + GG + KE I++ TPGRL+ M +
Sbjct: 158 ELAGQIFGVLNAIGEHHRFSAGLLIGGGGDVAIEKECVNKLNILICTPGRLLQHMDETPN 217
Query: 323 LTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSD 382
++ LVLDEADR+ D GF+ +V +I+ Q+ RQT LFSAT + V+ LAR L D
Sbjct: 218 FDCSQMQVLVLDEADRILDSGFKKEVNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKD 277
Query: 383 PVRVIVGE--VGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDD 440
P + V E V + Q V +VP D Q TLVF S V
Sbjct: 278 PEYISVHEESVTATPTLLKQTVMIVPLDQKLDMLWTFIKRHL--QSKTLVFLSSCKQVKF 335
Query: 441 IETQLSQR--GFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDI-KSIKTV 497
+ + G + LHG Q RM I +F VL +TDVAARGLD K++ V
Sbjct: 336 VFEVFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWV 395
Query: 498 VNFDIAKDMDMHVHRIGRTGR 518
V D +++ ++HR+GRT R
Sbjct: 396 VQVDCPENVASYIHRVGRTAR 416
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 170 bits (430), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 206/418 (49%), Gaps = 51/418 (12%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
++FE+ G ++ A+ K+ EKPT IQ A+P++L G+D++ AKTGSGKT A++LP++
Sbjct: 25 RSFEELGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTLAYLLPLL 84
Query: 240 VHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKE 299
+ +K+ P + AP+REL QQIY+E K + + + AV + L +
Sbjct: 85 QKLFTANVDRKKLAPNVFVLAPSRELCQQIYVEVKSLLELCKVPLKAVQLNSNMLAT--D 142
Query: 300 LKAGC----EIVVATPGRLIDMLKMKALTMTRAT----YLVLDEADRMFDLGFEPQVRSI 351
L+A +++++TP + L L LVLDEAD + G+E ++++
Sbjct: 143 LQAALVGPPDVLISTPACIAKCLSNSVLQAASINGSLETLVLDEADLLLSYGYENDIKAL 202
Query: 352 VGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVG-MANEDITQVVQ----VVP 406
I Q L SAT V+KL + +L +PV + + EVG +E I + VQ P
Sbjct: 203 TPHIPRSCQCLLMSATSSDDVDKLKKLMLHNPVILTLPEVGNRKDEVIPKNVQQFWIYCP 262
Query: 407 SDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMD 466
++ + Q L+F + T ++ L + G K A L+ + Q SR+
Sbjct: 263 ANDKLLYILAMLKLELV-QKKVLIFTNNIDTSFRLKLFLEKFGIKSAVLNAELPQNSRLH 321
Query: 467 ILQKFKSGVYHVLIATDVA---------------------------------ARGLDIKS 493
IL++F +G++ LIATD++ RG+D K+
Sbjct: 322 ILEEFNAGLFDYLIATDISQSTEKDEAPKENIVGSKKSRKYTKLKLDSEFGVVRGIDFKN 381
Query: 494 IKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQN 551
+ TV+NF++ + + +VHRIGRTGRA G + +L++ E E V S + +N
Sbjct: 382 VYTVINFEMPRSVTGYVHRIGRTGRAYS-SGTSISLVSTDEMDTFEE-VRSFVGDNEN 437
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 178/355 (50%), Gaps = 14/355 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F D P ++ AI G+E P+ +Q + +P + G D+I AK+G GKTA FVL +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 242 IMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKE 299
I P G + ++ TRELA QI E ++F+ ++V+ YGG++
Sbjct: 108 IDPVP------GQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDL 161
Query: 300 LKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD-LGFEPQVRSIVGQIRP 357
LK C +IVV TPGR++ + + K L++ + VLDE D+M + L V+ I
Sbjct: 162 LKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPH 221
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVG-EVGMANEDITQVVQVVPSDSXXXXXXX 416
D+Q +FSAT+ +++ + ++ + DP+ + V E + + Q +
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKLKEEEKNRKL 279
Query: 417 XXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVY 476
+D ++F + +++ L + F +H Q R+ + FK G
Sbjct: 280 NDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHS 339
Query: 477 HVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLIT 531
+L+ATD+ RG+DI+ + V+N+D+ D ++HR+GR GR G K G+A T ++
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK-GLAITFVS 393
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 178/355 (50%), Gaps = 14/355 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F D P ++ AI G+E P+ +Q + +P + G D+I AK+G GKTA FVL +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 242 IMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKE 299
I P G + ++ TRELA QI E ++F+ ++V+ YGG++
Sbjct: 108 IDPVP------GQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDL 161
Query: 300 LKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD-LGFEPQVRSIVGQIRP 357
LK C +IVV TPGR++ + + K L++ + VLDE D+M + L V+ I
Sbjct: 162 LKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPH 221
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVG-EVGMANEDITQVVQVVPSDSXXXXXXX 416
D+Q +FSAT+ +++ + ++ + DP+ + V E + + Q +
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKLKEEEKNRKL 279
Query: 417 XXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVY 476
+D ++F + +++ L + F +H Q R+ + FK G
Sbjct: 280 NDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHS 339
Query: 477 HVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLIT 531
+L+ATD+ RG+DI+ + V+N+D+ D ++HR+GR GR G K G+A T ++
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK-GLAITFVS 393
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 177/355 (49%), Gaps = 14/355 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F D P ++ AI G+E P+ +Q + +P + G D++ AK+G GKTA FVL +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQ 107
Query: 242 IMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFAKSYG-IRVSAVYGGMSKLEQFKE 299
I P G + +I TRELA QI E ++F+ ++V+ YGG++
Sbjct: 108 IDPVP------GQVSALILCHTRELAYQICHEFERFSTYLADLKVAVFYGGVNIKVHKDL 161
Query: 300 LKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD-LGFEPQVRSIVGQIRP 357
LK C IVV TPGR++ + + K L++ + +LDE D+M + L V+ I
Sbjct: 162 LKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPH 221
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVG-EVGMANEDITQVVQVVPSDSXXXXXXX 416
D+Q +FSAT+ +++ + ++ + DP+ + V E + + Q +
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKLKEEEKNRKL 279
Query: 417 XXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVY 476
+D ++F + +++ L + F +H Q R+ + FK G
Sbjct: 280 NDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHT 339
Query: 477 HVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLIT 531
+L+ATD+ RG+DI+ + V+N+D+ D ++HR+GR GR G K G+A T ++
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK-GLAITFVS 393
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 176/356 (49%), Gaps = 16/356 (4%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F D P ++ AI G+E P+ +Q + +P + G D+I AK+G GKTA FVL +
Sbjct: 125 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 184
Query: 242 IMDQPELQKEEGPIG--VICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFK 298
I P G + V+C TRELA QI E ++F+ I+V+ YGG++
Sbjct: 185 IDPVP------GQVAALVLCH-TRELAYQICHEVERFSTYLPDIKVAVFYGGVNIKVHKD 237
Query: 299 ELKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD-LGFEPQVRSIVGQIR 356
LK C IVV TPGR++ + + K L + + +LDE D+M + L V+ I
Sbjct: 238 LLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRKDVQEIFKLTP 297
Query: 357 PDRQTSLFSATMPRKVEKLAREILSDPVRVIVG-EVGMANEDITQVVQVVPSDSXXXXXX 415
D+Q +FSAT+ +++ + ++ + DP+ + V E + + Q +
Sbjct: 298 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKLQEPEKNRK 355
Query: 416 XXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
+D ++F + ++ L + F +H Q R+ + FK G
Sbjct: 356 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 415
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLIT 531
+L+ATD+ RG+DI+ + V+N+D+ D ++HR+GR GR G K G+A T ++
Sbjct: 416 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK-GLAITFVS 470
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 165/321 (51%), Gaps = 10/321 (3%)
Query: 204 TSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTR 263
T IQ +LP L GRD++G AKTGSGKT AF++P++ + + E+G +I +PT
Sbjct: 99 TDIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLY-RKRWGPEDGVGSIIISPTW 157
Query: 264 ELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLID-MLKMKA 322
ELA QI+ K +G + GG + KE +++ TPGRL+ M +
Sbjct: 158 ELAGQIFAVLKAIGCIHGFSAGLLIGGRQGVATEKECVNKLNVLICTPGRLLQHMDETPN 217
Query: 323 LTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSD 382
++ LVLDEADR+ D GF+ ++ +I+ Q+ RQT LFSAT + V+ LAR L D
Sbjct: 218 FDCSKMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKD 277
Query: 383 PVRVIVGE--VGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDD 440
P + V E V + Q V +VP D T + TLVF S V
Sbjct: 278 PEYISVHEESVTATPTLLKQKVMIVPLDQ--KLDMLWNFIKTHLKSKTLVFLSSCKQVKF 335
Query: 441 IETQLSQR--GFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDI-KSIKTV 497
+ + G + LHG Q RM I +F +L ATDVAARGLD +++ V
Sbjct: 336 VFEAFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCEKC-SILFATDVAARGLDFNRAVDWV 394
Query: 498 VNFDIAKDMDMHVHRIGRTGR 518
V D +++ ++HR+GRT R
Sbjct: 395 VQVDCPENVASYIHRVGRTAR 415
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 163 bits (413), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 188/381 (49%), Gaps = 23/381 (6%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPM 238
V +FE G VM A+++ G E PT IQC +P VL G+ ++ + TGSGKT A++LP+
Sbjct: 108 VGSFEGLGLGDEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPL 167
Query: 239 IVHIMDQPELQ----KEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKL 294
+ + ++ K + P V+ PTREL++Q++ +K + R + V GG
Sbjct: 168 VQLLRRDEQMNGLVLKPKRPRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLR 227
Query: 295 EQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQ 354
Q + L ++VV TPGR++ ++ + Y+VLDEAD MFD GF P ++ +
Sbjct: 228 PQEESLSNPIDMVVGTPGRILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAP 287
Query: 355 I-----RPDR---QTSLFSATMPRKVEKLAREILSDPVRV----IVGEVGMANEDITQVV 402
+ +PD QT L +ATM + V+ L E V + + ++ A D +
Sbjct: 288 LKHRASKPDSLGFQTVLVTATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDF---I 344
Query: 403 QVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQA 462
++ +++ +VF + + ++ L + HG+ A
Sbjct: 345 KLSGTENKLDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAA 404
Query: 463 SRMDILQKFKSGVYHV--LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAG 520
R++ L KFKS L+ TD+AARGLD+ + V+ FD + ++HR GRT R G
Sbjct: 405 QRVENLNKFKSNNDDCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMG 463
Query: 521 DKEGVAYTLITQKEARFAGEL 541
K G +L+T+K+ A ++
Sbjct: 464 AK-GKITSLVTKKDYSLATKI 483
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 188/417 (45%), Gaps = 60/417 (14%)
Query: 174 DVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAA 233
+ P K+F + G P ++ + K+G+ PT +Q A+P +L RD+I + TGSGKT A
Sbjct: 102 NAPFAAKSFSELGIPEVLIERLGKEGFNVPTDVQSAAVPTILKNRDVIIQSYTGSGKTLA 161
Query: 234 FVLPMIVHI-----------MDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGI 282
++LP++ I D E K+ G VI AP+REL QI E F K G+
Sbjct: 162 YLLPILSVIGPLKGENNEGGGDGGESGKKLGVEAVIVAPSRELGMQIVRE---FEKILGM 218
Query: 283 R----VSAVYGGMSKLEQFKELKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEAD 337
V + GG ++ Q + LK IVV TPGR+ ++ L YLVLDE D
Sbjct: 219 ENRKVVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSASGKLRAHGCQYLVLDEVD 278
Query: 338 RMFDLGFEPQVRSIVGQI-------------RPDRQTSLFSATMPRKVEKLAREILSDPV 384
+ F + ++ + + +RQ + SAT+P V + A+ SDP+
Sbjct: 279 ELLSFNFREDMHRLLEHVGRRSGADHNSKAKKTERQLIMVSATVPFSVVRAAKSWGSDPL 338
Query: 385 RV----IVGEVGMANEDI--------------TQVVQVVPSDSXXXXXXXXXXXXT---- 422
V IV ++ E + VV+ +P
Sbjct: 339 LVQAKKIVPLETLSPEPVKLSPSSSSTPSVPSKAVVESLPPALKHYYCVVRLQHKVDTLR 398
Query: 423 -----IDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYH 477
+D +VF + + D+ +L RG K A LHGD + R L+KFK+G
Sbjct: 399 RCIHALDAKFVIVFMNHTKQLKDVVFKLEARGVKAAELHGDLGKLGRSTTLKKFKNGEVR 458
Query: 478 VLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
VL+ +++ARGLD+ VVN D+ D + HR GRTGR G + G T+ + E
Sbjct: 459 VLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLG-RNGTVLTICEESE 514
>Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10126329 | 20130731
Length = 458
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 168/343 (48%), Gaps = 16/343 (4%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F++C P + +K GYEK T +Q LPV+L G+D++ AKTG+GKT AF+LP I
Sbjct: 107 FDECSVSPLSLKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEV 166
Query: 242 IMDQP--ELQKEEGPIGV-ICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQF 297
++ P + + + PI V + PTRELA+Q E+ K K + I V GG + +
Sbjct: 167 VVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQ 226
Query: 298 KEL-KAGCEIVVATPGRLIDMLKMK---ALTMTRATYLVLDEADRMFDLGFEPQVRSIVG 353
K + K C+I+VATPGRL D + A + V+DEADR+ D+GF + I+
Sbjct: 227 KRIQKNPCQILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEEIIT 286
Query: 354 QIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQ---VVPSDSX 410
+ RQT +FSAT+P+ V ++ L I E +QV Q + P D
Sbjct: 287 SVPKQRQTLMFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVRQMHLIAPLDKH 346
Query: 411 XXXXXXXXXXXTIDQGD--TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDIL 468
D+ D LVF + + + L + V ++ K Q R +
Sbjct: 347 FSLLSVILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFRNRVS 406
Query: 469 QKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVH 511
+F+ +L+ +DV+ARG+D + VV K +++H H
Sbjct: 407 DEFRKSKRLILVTSDVSARGVDYPDVSLVVQ---VKYVELHFH 446
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 181/377 (48%), Gaps = 34/377 (9%)
Query: 181 TFEDCGFPPPVMSAIK-KQGYEKPTSIQCQALPVVLS--GRDIIGIAKTGSGKTAAFVLP 237
TFE+ P ++ + + +EKP+ IQ ++LP++L+ RD+I A GSGKT F L
Sbjct: 80 TFEELSLSPELLKGLYVEMKFEKPSKIQAKSLPMILNPPHRDLIAQAHNGSGKTTCFNLG 139
Query: 238 MIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQF 297
M+ + P LQ P + PTRELA Q +K K GI S M + +
Sbjct: 140 MLSRV--DPNLQ---APQALCICPTRELAIQNIEVLRKMGKYTGIS-SECAVPMDRRDSI 193
Query: 298 KELKAG---CEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMF-DLGFEPQVRSIVG 353
+K ++V+ TPG + +++ K L +T+ LV DEAD+M + GF I+
Sbjct: 194 PVMKRAPIMAQVVIGTPGTMKNLITYKKLGVTKLKILVFDEADQMLAEDGFRDDSLRIIK 253
Query: 354 QI---RPDRQTSLFSATMPRKVEKLAREIL--SDPVRVIVGEVGMANEDITQVVQVVPSD 408
+I Q LFSAT V+ A ++ + + V + ++ + + Q +VP +
Sbjct: 254 EIEKFNSSCQVLLFSATFNETVKNFATRVVGKKEHNELFVKKEELSLDAVKQYKVLVPDE 313
Query: 409 SXXXXXXXXXXXXTIDQ-GDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDI 467
+ G T++F + + + L G++V ++ G D R I
Sbjct: 314 LVKIDVIKNYIFELGENVGQTIIFVRTRNSAKMLHKALVDLGYEVTSIQGALDHVDRDKI 373
Query: 468 LQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDI--------------AKDMDMHVHRI 513
+++FK G+ VLI+TDV ARG D + + V+N+D+ D ++++HR+
Sbjct: 374 VKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTHGHEQEPDYEVYLHRV 433
Query: 514 GRTGRAGDKEGVAYTLI 530
GR GR G K G + LI
Sbjct: 434 GRAGRFGRK-GAVFNLI 449
>Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:55283621-55286718 | 20130731
Length = 537
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 184/391 (47%), Gaps = 28/391 (7%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPM 238
+K+F+ G ++ ++ +P++IQ + P V++G+ I ++GSGKT A+++P
Sbjct: 130 LKSFKGIGCADFMIESLHNLSLTRPSNIQAMSFPPVIAGKSCIIADQSGSGKTLAYLVP- 188
Query: 239 IVHIMDQPELQ-----KEEGPIGVICAPTRELAQQIYLESKKFAKS--YGIRVSAVYGGM 291
I+ + Q ELQ + P +I APT ELA Q++ + +KS + V GG
Sbjct: 189 IIQRLRQQELQGLHKSSSQSPTLLILAPTAELASQVFHNCRSISKSGVVPFKSMLVTGGF 248
Query: 292 SKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMF-DLGFEPQVRS 350
+ Q L G ++++ATPGR + ++ L +T T VLDE D +F D FE ++
Sbjct: 249 RQKTQLDTLNQGVDVLIATPGRFLFLINQGFLHLTNLTCAVLDEVDILFGDEDFEKALQC 308
Query: 351 IVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVV-------- 402
++ D Q +AT+P+ V E+ D V+ + N + +++
Sbjct: 309 LISSSPVDTQYLFVTATLPKNVYSKLVEVFPDCEMVMGPSMHRINSRLEEIIVDCSGEDG 368
Query: 403 --QVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLS---QRGFKVAAL-- 455
+ + + T+VF +K T +E L+ ++G ++ L
Sbjct: 369 QEKTLDTAFLNKKAALLQLAEKNRVPRTIVFCNKIETCRKVENALNRFDRKGIRMQVLPF 428
Query: 456 HGDKDQASRMDILQKFKSG----VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVH 511
H Q SR+ +++F + ++ TD A+RG+D + V+ FD +D +V
Sbjct: 429 HAAMTQESRLASMKEFTRSPPKELSQFMVCTDRASRGIDFTRVDHVILFDYPRDPSEYVR 488
Query: 512 RIGRTGRAGDKEGVAYTLITQKEARFAGELV 542
R+GRT R +G A+ + K+ A +++
Sbjct: 489 RVGRTARGARGQGKAFIFVVGKQVSLARKVM 519
>Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 9/346 (2%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRD-IIGIAKTGSGKTAAFVLP 237
+K+F D G ++ A +K + P IQ + +P+ L G+D +IGI+ SGK AFVLP
Sbjct: 5 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 64
Query: 238 MIVHIMDQ-PELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
++ +++ P L + +P+R+L +I + +G++ + + ++Q
Sbjct: 65 ILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQ 121
Query: 297 FKELKAGCEIVVATPGRLIDMLKM-KALTMTRATYLVLDEADRMFDLGFEPQ-VRSIVGQ 354
++ ++V T ++ L++ + ++ R YLV+ EAD + + FE Q + I+
Sbjct: 122 TNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSI 181
Query: 355 IRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXX 414
I +R+T LFS+TM KV + R L +P+++ V + +TQ+ Q +
Sbjct: 182 IPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVS--SKYSTVVTQLQQSCFMPAMLKDC 239
Query: 415 XXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
+ + VF + + L F+ + QA ++ L FKSG
Sbjct: 240 YLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSG 299
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAG 520
+++L+ ++ A RGLDI ++ V+N++I +D + ++HR+G TG
Sbjct: 300 KFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVN 345
>Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 9/346 (2%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRD-IIGIAKTGSGKTAAFVLP 237
+K+F D G ++ A +K + P IQ + +P+ L G+D +IGI+ SGK AFVLP
Sbjct: 5 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 64
Query: 238 MIVHIMDQ-PELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
++ +++ P L + +P+R+L +I + +G++ + + ++Q
Sbjct: 65 ILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQ 121
Query: 297 FKELKAGCEIVVATPGRLIDMLKM-KALTMTRATYLVLDEADRMFDLGFEPQ-VRSIVGQ 354
++ ++V T ++ L++ + ++ R YLV+ EAD + + FE Q + I+
Sbjct: 122 TNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSI 181
Query: 355 IRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXX 414
I +R+T LFS+TM KV + R L +P+++ V + +TQ+ Q +
Sbjct: 182 IPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVS--SKYSTVVTQLQQSCFMPAMLKDC 239
Query: 415 XXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
+ + VF + + L F+ + QA ++ L FKSG
Sbjct: 240 YLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSG 299
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAG 520
+++L+ ++ A RGLDI ++ V+N++I +D + ++HR+G TG
Sbjct: 300 KFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVN 345
>Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 9/346 (2%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRD-IIGIAKTGSGKTAAFVLP 237
+K+F D G ++ A +K + P IQ + +P+ L G+D +IGI+ SGK AFVLP
Sbjct: 1 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 60
Query: 238 MIVHIMDQ-PELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
++ +++ P L + +P+R+L +I + +G++ + + ++Q
Sbjct: 61 ILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQ 117
Query: 297 FKELKAGCEIVVATPGRLIDMLKM-KALTMTRATYLVLDEADRMFDLGFEPQ-VRSIVGQ 354
++ ++V T ++ L++ + ++ R YLV+ EAD + + FE Q + I+
Sbjct: 118 TNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSI 177
Query: 355 IRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXX 414
I +R+T LFS+TM KV + R L +P+++ V + +TQ+ Q +
Sbjct: 178 IPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVS--SKYSTVVTQLQQSCFMPAMLKDC 235
Query: 415 XXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
+ + VF + + L F+ + QA ++ L FKSG
Sbjct: 236 YLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSG 295
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAG 520
+++L+ ++ A RGLDI ++ V+N++I +D + ++HR+G TG
Sbjct: 296 KFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVN 341
>Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382212-29375908 | 20130731
Length = 417
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 9/346 (2%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRD-IIGIAKTGSGKTAAFVLP 237
+K+F D G ++ A +K + P IQ + +P+ L G+D +IGI+ SGK AFVLP
Sbjct: 1 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 60
Query: 238 MIVHIMDQ-PELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
++ +++ P L + +P+R+L +I + +G++ + + ++Q
Sbjct: 61 ILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQ 117
Query: 297 FKELKAGCEIVVATPGRLIDMLKM-KALTMTRATYLVLDEADRMFDLGFEPQ-VRSIVGQ 354
++ ++V T ++ L++ + ++ R YLV+ EAD + + FE Q + I+
Sbjct: 118 TNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSI 177
Query: 355 IRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXX 414
I +R+T LFS+TM KV + R L +P+++ V + +TQ+ Q +
Sbjct: 178 IPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVS--SKYSTVVTQLQQSCFMPAMLKDC 235
Query: 415 XXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
+ + VF + + L F+ + QA ++ L FKSG
Sbjct: 236 YLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSG 295
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAG 520
+++L+ ++ A RGLDI ++ V+N++I +D + ++HR+G TG
Sbjct: 296 KFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVN 341
>Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 9/346 (2%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRD-IIGIAKTGSGKTAAFVLP 237
+K+F D G ++ A +K + P IQ + +P+ L G+D +IGI+ SGK AFVLP
Sbjct: 1 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 60
Query: 238 MIVHIMDQ-PELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
++ +++ P L + +P+R+L +I + +G++ + + ++Q
Sbjct: 61 ILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQ 117
Query: 297 FKELKAGCEIVVATPGRLIDMLKM-KALTMTRATYLVLDEADRMFDLGFEPQ-VRSIVGQ 354
++ ++V T ++ L++ + ++ R YLV+ EAD + + FE Q + I+
Sbjct: 118 TNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSI 177
Query: 355 IRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXX 414
I +R+T LFS+TM KV + R L +P+++ V + +TQ+ Q +
Sbjct: 178 IPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVS--SKYSTVVTQLQQSCFMPAMLKDC 235
Query: 415 XXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
+ + VF + + L F+ + QA ++ L FKSG
Sbjct: 236 YLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSG 295
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAG 520
+++L+ ++ A RGLDI ++ V+N++I +D + ++HR+G TG
Sbjct: 296 KFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVN 341
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 176/380 (46%), Gaps = 30/380 (7%)
Query: 171 SGFDVPKPVKTFEDCGFPPPVMSAIK-KQGYEKPTSIQCQALPVVLS--GRDIIGIAKTG 227
SG+ TFE+ P ++ + + G+ KP+ IQ LP++L+ +D+I A+ G
Sbjct: 45 SGYSPYTSAATFEELSLSPELLKGLYVEMGFIKPSKIQEITLPMILNPPHKDLIAQARNG 104
Query: 228 SGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAV 287
SGKT FVL M+ + P ++ P + PTRELA Q +K K GI
Sbjct: 105 SGKTTCFVLGMLSRV--DPNMK---APQALCICPTRELAIQNNEVLQKMGKYTGISSELA 159
Query: 288 YGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQ 347
M K+ + ++V+ TPG + + K L +TR LV DEAD+M +
Sbjct: 160 IPSMDKIPPSRRPPIMAQVVIGTPGTINSLKNHKKLGVTRLKILVFDEADQMLAQMMVTK 219
Query: 348 VRSIVGQIRPDRQTSLFSATMPRKVEKLAREILS--DPVRVIVGEVGMANEDITQVVQVV 405
+ Q+ LFSAT V+ A I++ + V + ++ E + Q +V
Sbjct: 220 DWLVFLQVL------LFSATFDDTVKNFATRIVAKKEHNEYFVKKEELSLEAVKQY-KVK 272
Query: 406 PSDSXXXXXXXXXXXXTIDQ--GDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQAS 463
+D + + G T++F + + + L G++V ++ G
Sbjct: 273 CTDELAKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKSLVDFGYEVTSIQGALQTEE 332
Query: 464 RMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDI----------AKDMDMHVHRI 513
R I+++FK G+ VLI+TDV +RG D + V+N+D+ D ++++HR+
Sbjct: 333 RDTIIKEFKDGLTQVLISTDVLSRGFDQDQVNLVINYDLPLKYTRGQEPEPDCEVYLHRV 392
Query: 514 GRTGRAGDKEGVAYTLITQK 533
GR GR G K G + LI +
Sbjct: 393 GRAGRFGRK-GAVFNLICHE 411
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 118/212 (55%), Gaps = 21/212 (9%)
Query: 196 KKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMD-QPELQKEEGP 254
++ G+E PT IQ QA+PVVLSGR + A TG+GKT A++ P+I H+ +Q+ +G
Sbjct: 60 ERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRVQRSDGT 119
Query: 255 IGVICAPTRELAQQIY-LESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGR 313
++ PTREL Q++ + K + + I + GG S+ ++ L+ G I++ATPGR
Sbjct: 120 FALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGR 179
Query: 314 LIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI---------------RP 357
L+D LK + T +++ DEADR+ +LGF +++ I+ + RP
Sbjct: 180 LLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGSMKTGHDDQESGVPRP 239
Query: 358 ---DRQTSLFSATMPRKVEKLAREILSDPVRV 386
RQ L SAT+ KV LA+ L DPV +
Sbjct: 240 SKFQRQNLLLSATLNEKVNHLAKISLEDPVMI 271
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 449 GFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDM 508
G K LHG+ +Q R Q FK+ +L++TDV+ARGLD +++ ++ +D +
Sbjct: 385 GCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATE 444
Query: 509 HVHRIGRTGRAGDK 522
+VHR+GRT R G++
Sbjct: 445 YVHRVGRTARLGER 458
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 21/212 (9%)
Query: 196 KKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMD-QPELQKEEGP 254
++ G+E PT +Q QA+PVVLSGR + A TG+GKT A++ P+I H+ +Q+ +G
Sbjct: 57 ERMGFEGPTLVQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRIQRSDGT 116
Query: 255 IGVICAPTRELAQQIY-LESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGR 313
++ PTREL Q++ + K + + I + GG S+ ++ L+ G I++ATPGR
Sbjct: 117 FALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGR 176
Query: 314 LIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI---------------RP 357
L+D LK + T +++ DEADR+ +LGF +++ I+ + RP
Sbjct: 177 LLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGSMKTGHDDQGNGVPRP 236
Query: 358 ---DRQTSLFSATMPRKVEKLAREILSDPVRV 386
RQ L SAT+ KV LA+ L DPV +
Sbjct: 237 TKFQRQNLLLSATLNEKVNHLAKISLEDPVMI 268
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 449 GFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDM 508
G K LHG+ +Q R Q FK+ +L++TDV+ARGLD +++ ++ +D +
Sbjct: 382 GCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATE 441
Query: 509 HVHRIGRTGRAGDK 522
+VHR+GRT R G++
Sbjct: 442 YVHRVGRTARLGER 455
>Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC |
scaffold0915:3555-1057 | 20130731
Length = 282
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 12/290 (4%)
Query: 195 IKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHI-MDQPELQKEEG 253
I ++G+E+P+ IQ +++P+ L+G DI+ AK G+GKTAAF +P + I D +Q
Sbjct: 3 IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQV--- 59
Query: 254 PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGR 313
VI PTRELA Q K+ K I+V GG S + L ++V TPGR
Sbjct: 60 ---VILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR 116
Query: 314 LIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVE 373
++D+ K + + LV+DEAD++ F+P + ++ + P RQ +FSAT P V+
Sbjct: 117 ILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILMFSATFPVTVK 176
Query: 374 KLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFA 432
L P + ++ E+ + + ITQ V I+Q +++F
Sbjct: 177 DFNDRYLRKPYIINLMDELTL--KGITQFYAFVEERQKVHCLNTLFSKLQINQ--SIIFC 232
Query: 433 SKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIAT 482
+ V+ + ++++ G+ +H Q R + F++G L+ T
Sbjct: 233 NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 282
>Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46124357-46130061 | 20130731
Length = 401
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 143/280 (51%), Gaps = 11/280 (3%)
Query: 262 TRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLK-M 320
T E+AQ++ L+ + +++ G+ V GG ++ + + L G IVVATPGRL+D L+
Sbjct: 2 THEVAQKL-LKHHRHSQTLGL----VIGGSARRTEAESLAKGINIVVATPGRLLDHLQNT 56
Query: 321 KALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAR-EI 379
K L++DEADR+ + FE +++ I+ + +RQT+LFSAT +KVE LAR
Sbjct: 57 KRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSATQTKKVEDLARLSF 116
Query: 380 LSDPVRVIV--GEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKAT 437
+ P+ + V G + NE + Q VVP + +VF S +
Sbjct: 117 QTTPIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHKSKK--VMVFFSSCNS 174
Query: 438 VDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTV 497
V + ++++G + Q +R F +L+ TDVAARGLDI S+ +
Sbjct: 175 VKFHADIFNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSVDWI 234
Query: 498 VNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARF 537
+ +D + ++HR+GRT R D +G A + +E +F
Sbjct: 235 LQYDPPDEPKEYIHRVGRTARGEDGKGNALLFLIPEELQF 274
>Medtr4g077370.1 | DEAD-box helicase family protein | LC |
chr4:29630577-29632466 | 20130731
Length = 446
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 139/274 (50%), Gaps = 20/274 (7%)
Query: 106 GMVEYDSDDNPIVIDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKS 165
M +++ + +++ KI+ P ++ +D +P S+ + I+ S + TD +
Sbjct: 187 NMYAFEACEGLKLLEHLKIDQSPTVELCEMDSKPGSRTWIS---PITTASYCNTTDCDNA 243
Query: 166 LAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAK 225
G D +F D G ++ K G + P +Q +P VL GR +IGI K
Sbjct: 244 ------GND---KHMSFSDLGLSEWMVRGCDKLGMQSPRPVQRHCIPKVLEGRHVIGIDK 294
Query: 226 TGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVS 285
TGSGKTAAF LP++ + + P G ++ PTRELA Q+ + S + ++
Sbjct: 295 TGSGKTAAFALPILQRLGETP-----FGVFALVLTPTRELAVQLAHQFWILGSSLRLILT 349
Query: 286 AVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMK---ALTMTRATYLVLDEADRMFDL 342
V GG+ K Q K+L A +V+ATP RL +L+ A +LVLDEAD++ D+
Sbjct: 350 VVVGGLDKRIQAKQLVARPNLVIATPERLKILLQDNPEIAPIFAATKFLVLDEADQLLDV 409
Query: 343 GFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLA 376
GF+ +++ I + +RQ FSATM ++K+
Sbjct: 410 GFQEELKVIFQCLPENRQNLFFSATMTSNLQKMC 443
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 100/203 (49%), Gaps = 33/203 (16%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
+F D G + KK G + P +Q +P VL GRD++GI +TGSGKTAAF LP++
Sbjct: 2 SFSDLGLSEWTVQNCKKLGMQTPRRVQQHCIPKVLEGRDVVGIDETGSGKTAAFALPILQ 61
Query: 241 HIMDQPELQKEEGPIGV-----ICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLE 295
+ + P+ P GV + PTRELA Q+ + S
Sbjct: 62 RLAEHPK------PFGVYVFALVLTPTRELAIQLADQFLALGSSL--------------- 100
Query: 296 QFKELKAGCEIVVATPGRL-IDMLKMKALTMTRAT--YLVLDEADRMFDLGFEPQVRSIV 352
L +V+ATP RL + +L + AT +LVLDEAD++ D+GF ++ IV
Sbjct: 101 ----LPTSPHLVIATPERLRVLLLDNPEIATIFATTKFLVLDEADQLLDVGFRDELNVIV 156
Query: 353 GQIRPDRQTSLFSATMPRKVEKL 375
+ +RQ FS TM ++K+
Sbjct: 157 QCLPENRQNLFFSETMTSNLKKM 179
>Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:21843191-21840034 | 20130731
Length = 276
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 22/215 (10%)
Query: 181 TFEDCGFPPPVMSAIK-KQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
+F G + ++ + G+E PT IQ QA+PVVLSGR + A TG+GKT A++ P+I
Sbjct: 41 SFSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPII 100
Query: 240 VHIMD-QPELQKEEGPIGVICAPTRELAQQIY-LESKKFAKSYGIRVSAVYGGMSKLEQF 297
H+ +Q+ +G ++ PTREL Q++ + K + + I + GG S+ ++
Sbjct: 101 HHLQSYDKRVQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEK 160
Query: 298 KELKAGCEIVVATPGRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI- 355
L+ G I++ATPGRL+D LK + T +++ DEADR+ +LGF +++ I+ +
Sbjct: 161 ARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLG 220
Query: 356 --------------RP---DRQTSLFSATMPRKVE 373
RP RQ L SAT+ K++
Sbjct: 221 SMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKLK 255
>Medtr8g032230.1 | DEAD-box helicase family protein | HC |
chr8:12119817-12118310 | 20130731
Length = 171
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
Query: 177 KPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVL 236
K +K+F+D G ++ A +K G++ P IQ +A+P L G+D+IG ++TGSGKT AF L
Sbjct: 6 KEIKSFKDLGLDELLVEAFEKMGWKNPKEIQLKAIPQALQGKDVIGFSQTGSGKTGAFAL 65
Query: 237 PMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
P++ ++D P G + +PTRELA Q+ + + G++ + + G M ++Q
Sbjct: 66 PILHALLDAP----RHGFFACVISPTRELAYQVPEQFEALGSEIGVKCAVLVGQMDMVQQ 121
Query: 297 FKELKAGCEIVVATPGRLIDMLK-MKALTMTRATYLV 332
E+ G +I V TPGR++D LK K ++ R YLV
Sbjct: 122 SIEIAKGPDIFVGTPGRVLDHLKNTKGFSLDRLKYLV 158
>Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:17543999-17545772 | 20130731
Length = 398
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 165/378 (43%), Gaps = 42/378 (11%)
Query: 193 SAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEE 252
S+ QG+ +P+SIQ + + G +I G+G F + I+ +D + +
Sbjct: 3 SSTHSQGFGRPSSIQQRVIAPFCEGLGVILQDPYGTGMLETFCIG-ILKKLDYGLVHCQ- 60
Query: 253 GPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKE------------- 299
++ APT EL QI + + +G+++ A GG S ++ ++
Sbjct: 61 ---ALVLAPTMELVLQIKEVMQDLGRFHGVKIHACVGGTSVPKEDRQRFLKVGYNSYIVE 117
Query: 300 ----------------LKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLG 343
K G I+V TP + DML+ + V+DE D+M LG
Sbjct: 118 GTSNVYDIIDMDGQFIFKGGVHIIVGTPRCVYDMLQRGRTRLDCIKMFVMDEVDQMLSLG 177
Query: 344 FEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQ 403
F+ ++ I + Q + SATMP + ++ R+ + PV + + E I Q
Sbjct: 178 FKDKIDEIFKLLPCKIQVGVISATMPPEALEITRKFMKKPVTIQAKPDELTLEGIKQFYV 237
Query: 404 VVPSDSXXXXXXXXXXXXTIDQ---GDTLVFASKKATVDDIETQLSQRGFKVAALHGDKD 460
V + T+ +VF + VD + ++ R KV+ + D D
Sbjct: 238 DVEKEEWKLETLCDIFELTVKAKSITHCIVFVDTRCKVDWLTDKMQSRDHKVSVIQSDMD 297
Query: 461 QASRMDILQKF--KSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIG-RTG 517
Q +R I+++F +SG HVLI TD G D+ + +VN+D+ + +++RIG R+G
Sbjct: 298 QNTRDIIVREFFSQSGSPHVLITTDPLVCGTDVHKVSLIVNYDLPAAPENYLYRIGRRSG 357
Query: 518 RAGDKEGVAYTLITQKEA 535
+ G VA +T+ EA
Sbjct: 358 QFG--RCVAINFMTKDEA 373
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 19/306 (6%)
Query: 250 KEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVA 309
K + P V+ PTREL++Q++ +K + R + V GG Q + L ++VV
Sbjct: 7 KPKRPRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQEESLSNPIDMVVG 66
Query: 310 TPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI-----RPDR---QT 361
TPGR++ ++ + Y+VLDEAD MFD GF P ++ + + +PD QT
Sbjct: 67 TPGRILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAPLKHRASKPDSLGFQT 126
Query: 362 SLFSATMPRKVEKLAREILSDPVRV----IVGEVGMANEDITQVVQVVPSDSXXXXXXXX 417
L +ATM + V+ L E V + + ++ A D +++ +++
Sbjct: 127 VLVTATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDF---IKLSGTENKLDSLLQV 183
Query: 418 XXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYH 477
+VF + + ++ L + HG+ A R++ L KFKS
Sbjct: 184 LEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVENLNKFKSNNDD 243
Query: 478 V--LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEA 535
L+ TD+AARGLD+ + V+ FD + ++HR GRT R G K G +L+T+K+
Sbjct: 244 CPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAK-GKITSLVTKKDY 301
Query: 536 RFAGEL 541
A ++
Sbjct: 302 SLATKI 307
>Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561636 | 20130731
Length = 314
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 111/207 (53%), Gaps = 10/207 (4%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F D P ++ AI G+E P+ +Q + +P + G D+I AK+G GKTA FVL +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 242 IMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKE 299
I P G + ++ TRELA QI E ++F+ ++V+ YGG++
Sbjct: 108 IDPVP------GQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDL 161
Query: 300 LKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD-LGFEPQVRSIVGQIRP 357
LK C +IVV TPGR++ + + K L++ + VLDE D+M + L V+ I
Sbjct: 162 LKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPH 221
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPV 384
D+Q +FSAT+ +++ + ++ + D +
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDVI 248
>Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49558567 | 20130731
Length = 314
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 111/207 (53%), Gaps = 10/207 (4%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F D P ++ AI G+E P+ +Q + +P + G D+I AK+G GKTA FVL +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 242 IMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKE 299
I P G + ++ TRELA QI E ++F+ ++V+ YGG++
Sbjct: 108 IDPVP------GQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDL 161
Query: 300 LKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD-LGFEPQVRSIVGQIRP 357
LK C +IVV TPGR++ + + K L++ + VLDE D+M + L V+ I
Sbjct: 162 LKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPH 221
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPV 384
D+Q +FSAT+ +++ + ++ + D +
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDVI 248
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 151/336 (44%), Gaps = 36/336 (10%)
Query: 210 ALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQI 269
+P G D+I +G+G +A F + I+ ++D EL + ++ APT ELA QI
Sbjct: 2 VIPPFCKGHDVILQDPSGTGMSATFCIG-ILKMLDY-ELAHCQA---LVLAPTNELALQI 56
Query: 270 YLESKKFAKSYGIRVSAVYGGMS----KLEQFKELKAGCEIVVATPGRLIDMLKMKALTM 325
+ + +G+R+ A GG+S L++F M+ T+
Sbjct: 57 KQVMQDLGQFHGVRIHACVGGISAPVEDLQRF----------------------MQVFTL 94
Query: 326 TRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVR 385
+V+DE D M FE ++ I + Q + S+TMP + ++ R+ + PV
Sbjct: 95 L----VVMDEVDEMLSCDFEEKIDKIFQLLPYKIQVGVISSTMPPEALEITRKFMKKPVT 150
Query: 386 VIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQL 445
+ + + + V + T +VF + + VD + ++
Sbjct: 151 IQAKRDELTTLEGIKQFYVNVDEEKWKLETLYDIYTTKFITHCIVFVNTERKVDWLMDKM 210
Query: 446 SQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKD 505
R + V +H D DQ +R I++ F+SG +LI TD GLD++ + V+N+D+
Sbjct: 211 RSRYYTVLTIHDDMDQNTRDIIVRNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTL 270
Query: 506 MDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGEL 541
+ ++HRI GR G ++GVA +T + R ++
Sbjct: 271 PENYLHRICHKGRFG-RKGVAINFVTLDDFRMLSDI 305
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 98/193 (50%), Gaps = 7/193 (3%)
Query: 331 LVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGE 390
LVLDEADR+ D GF+ +V +I+ Q+ RQT LFSAT + V+ LAR L DP + V E
Sbjct: 15 LVLDEADRILDSGFKKEVNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEYISVHE 74
Query: 391 --VGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQR 448
V + Q V +VP D Q TLVF S V + +
Sbjct: 75 ESVTATPTLLKQTVMIVPLDQKLDMLWTFIKRHL--QSKTLVFLSSCKQVKFVFEVFKKL 132
Query: 449 --GFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDI-KSIKTVVNFDIAKD 505
G + LHG Q RM I +F VL +TDVAARGLD K++ VV D ++
Sbjct: 133 HPGIPLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPEN 192
Query: 506 MDMHVHRIGRTGR 518
+ ++HR+GRT R
Sbjct: 193 VASYIHRVGRTAR 205
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 156/370 (42%), Gaps = 86/370 (23%)
Query: 179 VKTFEDCGFPPPVMSAIKKQ-GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLP 237
+K+F D G ++ +KQ + P IQ Q +P+ L G+D+ I+ SGKT AFVLP
Sbjct: 1 MKSFTDLGLSLQLVEVCEKQLDWYDPLKIQAQVIPLALEGKDVYAISPPRSGKTGAFVLP 60
Query: 238 MIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQF 297
+ + E+ + Y E+ + +G++ + + Q
Sbjct: 61 IFQALNFAFEIAR-------------------YFEA--LGQHFGVKFAVLVSTSDMEYQT 99
Query: 298 KELKAGCEIVVATPGRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIR 356
++ I+VATPG+L+ LK A ++ + YLVLDEA + E + I
Sbjct: 100 NKILQQPHIIVATPGKLVKHLKDTPAFSLRKLKYLVLDEAHLL-----ESNYKHI----- 149
Query: 357 PDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXX 416
DRQ +PR + SD + D ++Q V
Sbjct: 150 -DRQLEFILGKIPRNRTTF---LFSD-----------SKTDKVDMIQSV----------- 183
Query: 417 XXXXXTIDQGDTLVFASKKATVDD-IETQLSQRGF-----KVAALHGDKD---QASRMDI 467
F +D+ IE Q+ KV L K+ QA R++
Sbjct: 184 --------------FLRNPVKIDESIEYPEQQQCHMPAKDKVYPLPCPKNIVSQAKRLEA 229
Query: 468 LQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAY 527
L FKSG +L+ D+A+RGLDI ++ TV+N+DI D ++H +G+ GVA
Sbjct: 230 LNAFKSGNCKILLCNDLASRGLDIPAVDTVINYDIPDDPRDYMHHVGQAAPT----GVAI 285
Query: 528 TLITQKEARF 537
+ ++ EAR+
Sbjct: 286 SFVSPNEARW 295
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 101/198 (51%), Gaps = 8/198 (4%)
Query: 326 TRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVR 385
++ LVLDEADR+ D GF+ ++ +I+ Q+ RQT LFSAT + V+ LAR L DP
Sbjct: 10 SKMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEY 69
Query: 386 VIVGE--VGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIET 443
+ V E V + Q V +VP D T + TLVF S V +
Sbjct: 70 ISVHEESVTATPTLLKQKVMIVPLDQ--KLDMLWNFIKTHLKSKTLVFLSSCKQVKFVFE 127
Query: 444 QLSQR--GFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDI-KSIKTVVNF 500
+ G + LHG Q RM I +F +L ATDVAARGLD +++ VV
Sbjct: 128 AFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCEKC-SILFATDVAARGLDFNRAVDWVVQV 186
Query: 501 DIAKDMDMHVHRIGRTGR 518
D +++ ++HR+GRT R
Sbjct: 187 DCPENVASYIHRVGRTAR 204
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 178/411 (43%), Gaps = 59/411 (14%)
Query: 175 VPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAF 234
VP ++ P ++ +++ GY PT +Q QALP + SGRD I A+TGSGKT A+
Sbjct: 76 VPITLRQLCQSHVPDQLLQRMEEVGYVMPTPVQKQALPRLFSGRDCILHAQTGSGKTLAY 135
Query: 235 VLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKL 294
+L +I I+ ++ ++ PTREL Q+ K A+ + + V G
Sbjct: 136 LL-LIYSIIS----TRKSSFQALVLVPTRELGMQV----TKVARILAAKPTGVEGEQRSC 186
Query: 295 EQFKELKAGC-------------EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD 341
L G IVVAT L ML+ + ++ LV+DE D +F+
Sbjct: 187 TIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQMLERQLFSLGNLRVLVVDEVDFIFN 246
Query: 342 LGFE-PQVRSIVGQIRP--DRQTSLFSATMPRKVEKL---------AREILS---DPV-- 384
+ +R I+ +RQT SA++P+ + L R+++ PV
Sbjct: 247 SSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNQFLNEAVQQKWTKRDVIHIHVSPVEP 306
Query: 385 -------RVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKAT 437
R IV ++ + + ++Q +S G++ S
Sbjct: 307 MPSRLSHRFIVCDIKRKLQTLLSLIQSDAPESGIIFVSEQSEKSK-KAGNS---PSTSLV 362
Query: 438 VDDIETQLSQRG-FKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKT 496
+D ++T S G + L D + SR L + + G ++L+ATDVAARG+D +
Sbjct: 363 IDFLKT--SYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTH 420
Query: 497 VVNFDIAKDMDMHVHRIGRTGRA--GDKEGVAYTLITQKE----ARFAGEL 541
+ N+D+ K ++HR GRT R D ++I +E R+ EL
Sbjct: 421 IYNYDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENEL 471
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 162/373 (43%), Gaps = 43/373 (11%)
Query: 187 FPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQP 246
FP + +K Q + TSIQ +A+P++L G D+ + GSGKT A+++P + H+
Sbjct: 25 FPTISRTLVKFQA-ARMTSIQAKAIPLLLRGDDLAAYSSNGSGKTLAYLIPALDHLCKN- 82
Query: 247 ELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEI 306
+ + ++G I ++ P +A QI + K K + + G + + ++ +
Sbjct: 83 KYEPDDGIIVMVLCPNTMVAIQIDRDIKTILKDSPQTLQTI-GRLIASPGDRYVRKN--L 139
Query: 307 VVATPG--RLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQ-----VRSIVGQIRPDR 359
++ATP R + + + +L+ D D L F Q VRS +
Sbjct: 140 LIATPAGLRYHHAYDPERIKYDKLKFLIFD--DPYLILRFSDQKKWNWVRS--NFPKEQL 195
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRV-----------IVGEV----GMANEDITQVVQV 404
Q ++FS T KL RE L +R+ ++ EV + N+ + Q +
Sbjct: 196 QIAIFSVT------KLKRECL---LRLLPEGRRPGDFSVIDEVQNRQWVTNDRLEQEFIL 246
Query: 405 VPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASR 464
VP T +VF S +V E + K +HGD+ +
Sbjct: 247 VPC--AKRLITLYIMLKTTKSKKVMVFFSTTESVKFHEELFTFLDVKCYGVHGDQTVSEH 304
Query: 465 MDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEG 524
I F + +L+ T++AA GL+I + +V +D D + ++H++GRT R G ++G
Sbjct: 305 SKIYYSFSNAEEMILLCTNIAAFGLNIPDVDLIVQYDPPIDPEEYIHKVGRTAR-GTRKG 363
Query: 525 VAYTLITQKEARF 537
A + E RF
Sbjct: 364 NALLFLMPHELRF 376
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 140/343 (40%), Gaps = 49/343 (14%)
Query: 199 GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 258
GY +Q +A+ VLSGRD + TG GK+ + +P + +EG + V+
Sbjct: 39 GYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALA----------KEGIVLVV 88
Query: 259 CAPTRELAQQIY-LESKKFAKSYGIRVSAVYGGMSKLEQFKELKAG---------CEIVV 308
C + Q+ L+ K A + +S+ +K + ++L +G ++
Sbjct: 89 CPLIALMENQVMALKEKGIAAEF---LSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELI 145
Query: 309 ATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLG--FEPQVR--SIVGQIRPDRQTSLF 364
ATPG + + K+ + + + + +DEA + G F P R S + PD
Sbjct: 146 ATPGFMSKLTKIHSRGLL--SLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILAL 203
Query: 365 SATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTID 424
+AT KV+K +V + M N I + P+ D
Sbjct: 204 TATAVPKVQK-----------DVVESLHMQNALILKTSFNRPNIYYEVRYKDLLDDSYSD 252
Query: 425 QGDTL---------VFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
D L ++ +++ DD+ LSQRG AA H + R +L + S
Sbjct: 253 LSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSK 312
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGR 518
V++AT G+D K ++ V +F+I K M+ GR GR
Sbjct: 313 TKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGR 355
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 140/343 (40%), Gaps = 49/343 (14%)
Query: 199 GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 258
GY +Q +A+ VLSGRD + TG GK+ + +P + +EG + V+
Sbjct: 39 GYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALA----------KEGIVLVV 88
Query: 259 CAPTRELAQQIY-LESKKFAKSYGIRVSAVYGGMSKLEQFKELKAG---------CEIVV 308
C + Q+ L+ K A + +S+ +K + ++L +G ++
Sbjct: 89 CPLIALMENQVMALKEKGIAAEF---LSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELI 145
Query: 309 ATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLG--FEPQVR--SIVGQIRPDRQTSLF 364
ATPG + + K+ + + + + +DEA + G F P R S + PD
Sbjct: 146 ATPGFMSKLTKIHSRGLL--SLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILAL 203
Query: 365 SATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTID 424
+AT KV+K +V + M N I + P+ D
Sbjct: 204 TATAVPKVQK-----------DVVESLHMQNALILKTSFNRPNIYYEVRYKDLLDDSYSD 252
Query: 425 QGDTL---------VFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
D L ++ +++ DD+ LSQRG AA H + R +L + S
Sbjct: 253 LSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSK 312
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGR 518
V++AT G+D K ++ V +F+I K M+ GR GR
Sbjct: 313 TKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGR 355
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 459 KDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGR 518
+ Q R L +F+ GV+ VL+++D RG+D++ ++ V+N+D+ K + HVHR GRT R
Sbjct: 370 QHQRVRSKTLNEFRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGRTAR 429
Query: 519 AGDKEGVAYTLITQKEARFAGELV 542
AG + G +TL+++ E R +L+
Sbjct: 430 AG-QTGRCFTLMSEDEVRRFKKLI 452
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 37/169 (21%)
Query: 218 RDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPI-----GVICAPTRELAQQIYLE 272
RDI + TGSGKT A+ LP++ Q G + ++ PTR+LA Q+
Sbjct: 70 RDICVNSPTGSGKTLAYALPLV---------QMLSGRVTKCLRALVVVPTRDLALQVKQV 120
Query: 273 SKKFAKSYGIRVSAVYGGMSKLEQFKEL----------------------KAGCEIVVAT 310
A G+RV G S ++ EL ++ +I+VAT
Sbjct: 121 FDAVASPLGLRVGLAVGQSSLADEISELVEMPARDIGTCYDPHCISLPRFQSKVDILVAT 180
Query: 311 PGRLIDMLKMK-ALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPD 358
PGRL+D + T+ YLV+DE DR+ ++ + +++ I+ +
Sbjct: 181 PGRLMDHINTTIGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELIQSN 229
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 21/146 (14%)
Query: 260 APTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLK 319
AP L +I K + + I + GG S+ ++ L+ G I++ATPGRL+D LK
Sbjct: 7 APMEHLVHEIL--QKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGRLLDHLK 64
Query: 320 -MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI---------------RP---DRQ 360
+ T +++ DEADR+ +LGF +++ I+ + RP RQ
Sbjct: 65 NTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGSMKTGHDDQGNGVPRPTKFQRQ 124
Query: 361 TSLFSATMPRKVEKLAREILSDPVRV 386
L SAT+ KV LA+ L DPV +
Sbjct: 125 NLLLSATLNEKVNHLAKISLEDPVMI 150
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 449 GFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDM 508
G K LHG+ +Q R Q FK+ +L++TDV+ARGLD +++ ++ +D +
Sbjct: 264 GCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATE 323
Query: 509 HVHRIGRTGRAGDK 522
+VHR+GRT R G++
Sbjct: 324 YVHRVGRTARLGER 337
>Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:34021263-34013553 | 20130731
Length = 313
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 459 KDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGR 518
+ Q R L +F+ GV+ VL+++D R +D++ ++ V+N+D+ K + +VHR GRT R
Sbjct: 186 QHQRVRSKTLNEFRKGVFQVLLSSDALTREMDVEGVRNVINYDVPKFIKTYVHRAGRTAR 245
Query: 519 AGDKEGVAYTLITQKEARFAGELV 542
A + G +TL+++ E R +L+
Sbjct: 246 AV-QTGRCFTLMSEDEVRRFKKLI 268
>Medtr2g031570.1 | DEAD-box helicase family protein | LC |
chr2:11922449-11924042 | 20130731
Length = 140
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
+F+D G ++ A +K G++ P IQ + +P+ L G+D+IGI+ T SGKT AFVLP++
Sbjct: 72 SFKDLGLSEQLVEACEKIGWKNPKEIQTEVIPLALQGKDVIGISNTSSGKTGAFVLPILH 131
Query: 241 HIMDQP 246
+ QP
Sbjct: 132 ALALQP 137
>Medtr1g050730.1 | DEAD-box helicase family protein | HC |
chr1:19639763-19632815 | 20130731
Length = 532
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 148/355 (41%), Gaps = 20/355 (5%)
Query: 216 SGRDIIGIAKT-GSGKTAAFVLPMIVHIMDQPELQ--KEEGPIGVICAPTRELAQQIYLE 272
+G+D+I T + + A+++ I + E Q + P + P+ + A Q+
Sbjct: 175 TGKDLIDTGGTFATTEQIAWMVSAAADIFVRKEKQGLSLDTPFLLFLVPSEKKAGQVRTV 234
Query: 273 SKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCE--IVVATPGRLIDMLKMKALTMTRATY 330
K KS GI +V+ G S Q + LK+ CE +++TP RL++++ +KA+ ++ +
Sbjct: 235 CKPL-KSVGIHTVSVHPGASLDHQIQGLKS-CEPEFLISTPERLLELVSLKAIDISGISM 292
Query: 331 LVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPV-RV-IV 388
LV+D D + G ++SI I + +F+ + + R +L+ P+ R+ I
Sbjct: 293 LVIDGFDAICKAGHADAIKSIKKFISGNPSLVVFNDSFNHTSIPVVRHLLTGPICRISIN 352
Query: 389 GEVGMANEDITQVVQVVPSDSXXXXXXXXXX----XXTIDQGDTLVFASKKATVDDIETQ 444
+ + I Q VQV SD + L K +
Sbjct: 353 NSIASLSSCIVQSVQVCTSDEDKLVKSIEVLRQFRSSQTHSSNLLYILRKDVKCHKLVKT 412
Query: 445 LSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAK 504
L G + D D A+ D + + V + + D++ LDI +V +
Sbjct: 413 LKSMGCSTSL---DSDAATINDSVDSNRRLVTMIDLE-DIST--LDIGMYDVIVLPSLVP 466
Query: 505 DMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDL 559
MD + H + R G+ + +T+ + AG L++ L GQ V L DL
Sbjct: 467 SMDTYEHILTNMARQS-VNGILHGFLTKSDTEHAGPLISILEQCGQEVPETLKDL 520
>Medtr8g079452.1 | helicase family carboxy-terminal domain protein |
HC | chr8:34005644-34004777 | 20130731
Length = 113
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 468 LQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAY 527
L +F+ GV+ VL+++D R +D++ ++ V+N+D+ K + +VHR GRT RA + G +
Sbjct: 26 LNEFRKGVFQVLLSSDALTRVMDVEGVRNVINYDVPKFIKTYVHRAGRTARA-VQTGRCF 84
Query: 528 TLITQKEA 535
TL+++ EA
Sbjct: 85 TLMSEDEA 92
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 37/204 (18%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
++ G + A+ P+ +Q ++P VLSG+D++ A+TGSGKT +++LP+I
Sbjct: 91 SWSSIGLSHTLSRALSNIALNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLID 150
Query: 241 HIMDQPELQ------KEEGP----IGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGG 290
+ E KE P + ++ P +L +Q+ +R++ G
Sbjct: 151 KLRGTEEYSLDVVSDKEISPPARKVLLVLCPNVQLCEQV------------VRMANSLCG 198
Query: 291 MSKLEQFKELKAGC----------EIVVATPGRLIDML----KMKALTMTRATYLVLDEA 336
+ E A C +I+V TP L++ + + + M Y+V DEA
Sbjct: 199 DND-ETIVSAAAICGKQGWPIREPDIIVTTPAALLNHVDVDRRRRMEFMHGVKYVVFDEA 257
Query: 337 DRMFDLGFEPQVRSIVGQIRPDRQ 360
D + F+ +V ++ +R D +
Sbjct: 258 DMLLCGSFQNKVIRLINLLRYDEK 281
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Query: 428 TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKF--KSGVYHVLIATDVA 485
T+VFA+ V+ + L G + H + R L F K GV L+ TD A
Sbjct: 438 TMVFANTVEAVEAVVKILGYAGLECLRYHKNCTLDERAQTLVDFYDKGGV---LVCTDAA 494
Query: 486 ARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSL 545
ARG+DI ++ V+ D A +HRIGRT RAG + G+ ++ T+ ELV+++
Sbjct: 495 ARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAG-QIGLVTSMYTESNR----ELVDAV 549
Query: 546 IAAGQ 550
AG+
Sbjct: 550 RRAGE 554
>Medtr1g103260.1 | fanconi anemia, complementation group M protein |
HC | chr1:46727606-46713877 | 20130731
Length = 1198
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 429 LVFASKKATVDDIETQLSQRGFKV-----------AALHGDKDQASRMDILQKFKSGVYH 477
++F++ + +V DI L G +V A+ G + Q + +L+KF+SG Y+
Sbjct: 460 IIFSNYRESVRDIMVALGGTGDQVRATEFIGQSSGKAMKG-QSQKVQQAVLKKFRSGAYN 518
Query: 478 VLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGD 521
V++AT + GLDI + V++FD + R+GRTGR D
Sbjct: 519 VIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHD 562
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 435 KATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSI 494
K ++ L +KV ++ + R ++++FK G VLI+ DV ARG D +
Sbjct: 75 KIECKNVAKALVDLSYKVNSILDALEHEERDKMVKEFKDGSTGVLISNDVLARGFDQDQV 134
Query: 495 KTVVNFDIA--------------KDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGE 540
V+N+D+ D +++ HR+GR GR G K V + +++ + +
Sbjct: 135 NLVINYDLPLNYTAEITCGGKPELDCEVYFHRVGRAGRFGRKGAVFNLICDERDEKLMSK 194
Query: 541 LVN 543
+ N
Sbjct: 195 IEN 197
>Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like protein
| LC | chr1:1383737-1377649 | 20130731
Length = 400
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 437 TVDDIETQLSQR-GFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIK 495
T+ ++ + R GF+ + QA ++ L FKSG Y++L+ +D ++GLDI ++
Sbjct: 155 TLSNVVQRFFWRLGFRAIPIMRYMSQAKKLRSLNAFKSGEYNILLCSDFLSKGLDIPAVD 214
Query: 496 TVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
V+N++I + +++R+G T + VA + ++ E R
Sbjct: 215 MVINYNIPRYPKDYIYRVGWTAAHVN---VAISFVSPDERR 252
>Medtr6g040070.1 | DEAD/DEAH-box helicase | HC |
chr6:14397151-14388452 | 20130731
Length = 784
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 12/183 (6%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPM 238
V F++ G ++ +++ G P+ IQC +P +L G+ ++ + + +T A++LP+
Sbjct: 576 VGGFKELGMSDELIEVMEEIGEFVPSEIQCVVIPTILDGKSLLLSSPSQHDRTLAYLLPL 635
Query: 239 IVHIMDQPEL--QKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
I + EL + P V+ + E +Q + A Y I + V ++
Sbjct: 636 IQMLRRDRELLGSNSKYPRAVVLCASEEKVEQCF-----NAARYIIHNAEVKSAKNRASS 690
Query: 297 FKEL-KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMF-DLGFEPQVRSIVGQ 354
E + +++ TP ++ ++ + LVLDEAD M F P++ I
Sbjct: 691 DTEKSNSSIGLMIGTPYEILQYIEEGTIVPAELKCLVLDEADSMLGSSNFGPEINKI--- 747
Query: 355 IRP 357
IRP
Sbjct: 748 IRP 750