Miyakogusa Predicted Gene

Lj1g3v4831820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4831820.1 Non Characterized Hit- tr|I3T553|I3T553_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.97,0,GlnB-like,Nitrogen regulatory PII-like, alpha/beta;
PII_GLNB_DOM,Nitrogen regulatory protein PII; P-,CUFF.33415.1
         (195 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g109970.1 | nitrogen regulatory protein P-II | HC | chr7:4...   281   2e-76
Medtr7g109970.2 | nitrogen regulatory protein P-II | HC | chr7:4...   267   5e-72
Medtr7g109970.3 | nitrogen regulatory protein P-II | HC | chr7:4...   229   2e-60

>Medtr7g109970.1 | nitrogen regulatory protein P-II | HC |
           chr7:45062050-45059013 | 20130731
          Length = 194

 Score =  281 bits (720), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 141/191 (73%), Positives = 159/191 (83%), Gaps = 1/191 (0%)

Query: 3   IARTHMFGVVNFQLNEAPMAFAGSSAILWHHGERSQRNVALRRRGNAMIVPRIRAQSSAS 62
           IA+ ++F  +NF +NE    F+  S I    G+ S RNV L+  GNA I+P+IRAQ+   
Sbjct: 4   IAKPNVFNGLNFHINETQFPFSSFSVIRKRFGDSSHRNVVLKSNGNASILPKIRAQN-LP 62

Query: 63  EYVPDSKFYKVEAILRPWRVPLVSSALLNMGIRGVTVSDVRGFGAQGGSKERQGGSEFSE 122
           +YVP+SKFYKVEAILRPWR+P VSS LL MGIRGVTVSDV+GFGAQGGSKERQGGSEFSE
Sbjct: 63  DYVPESKFYKVEAILRPWRIPQVSSGLLKMGIRGVTVSDVKGFGAQGGSKERQGGSEFSE 122

Query: 123 DNFVAKVKMEIVVRNDQVEAVIDKIIEEARTGEIGDGKIFLIPVSDVIRVRTGERGEQAE 182
           DNFVAKVKMEIVVR DQVEAVI+KI+E ARTGEIGDGKIFLIPVSDVIR+RTGERGEQAE
Sbjct: 123 DNFVAKVKMEIVVRKDQVEAVINKIMETARTGEIGDGKIFLIPVSDVIRIRTGERGEQAE 182

Query: 183 RMTGGRTDILS 193
           RM GG TD LS
Sbjct: 183 RMAGGLTDALS 193


>Medtr7g109970.2 | nitrogen regulatory protein P-II | HC |
           chr7:45061988-45059049 | 20130731
          Length = 189

 Score =  267 bits (682), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 137/191 (71%), Positives = 155/191 (81%), Gaps = 6/191 (3%)

Query: 3   IARTHMFGVVNFQLNEAPMAFAGSSAILWHHGERSQRNVALRRRGNAMIVPRIRAQSSAS 62
           IA+ ++F  +NF +NE    F+  S I    G+ S RNV L+  GNA I+P+IRAQ+   
Sbjct: 4   IAKPNVFNGLNFHINETQFPFSSFSVIRKRFGDSSHRNVVLKSNGNASILPKIRAQN-LP 62

Query: 63  EYVPDSKFYKVEAILRPWRVPLVSSALLNMGIRGVTVSDVRGFGAQGGSKERQGGSEFSE 122
           +YVP+SKFYKVEAILRPWR+P VSS LL MGIRGVTVSDV+GFGAQGGSKERQGGSEFSE
Sbjct: 63  DYVPESKFYKVEAILRPWRIPQVSSGLLKMGIRGVTVSDVKGFGAQGGSKERQGGSEFSE 122

Query: 123 DNFVAKVKMEIVVRNDQVEAVIDKIIEEARTGEIGDGKIFLIPVSDVIRVRTGERGEQAE 182
           DNFVAKVKMEIV     VEAVI+KI+E ARTGEIGDGKIFLIPVSDVIR+RTGERGEQAE
Sbjct: 123 DNFVAKVKMEIV-----VEAVINKIMETARTGEIGDGKIFLIPVSDVIRIRTGERGEQAE 177

Query: 183 RMTGGRTDILS 193
           RM GG TD LS
Sbjct: 178 RMAGGLTDALS 188


>Medtr7g109970.3 | nitrogen regulatory protein P-II | HC |
           chr7:45062050-45059041 | 20130731
          Length = 179

 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/161 (70%), Positives = 131/161 (81%), Gaps = 1/161 (0%)

Query: 3   IARTHMFGVVNFQLNEAPMAFAGSSAILWHHGERSQRNVALRRRGNAMIVPRIRAQSSAS 62
           IA+ ++F  +NF +NE    F+  S I    G+ S RNV L+  GNA I+P+IRAQ+   
Sbjct: 4   IAKPNVFNGLNFHINETQFPFSSFSVIRKRFGDSSHRNVVLKSNGNASILPKIRAQN-LP 62

Query: 63  EYVPDSKFYKVEAILRPWRVPLVSSALLNMGIRGVTVSDVRGFGAQGGSKERQGGSEFSE 122
           +YVP+SKFYKVEAILRPWR+P VSS LL MGIRGVTVSDV+GFGAQGGSKERQGGSEFSE
Sbjct: 63  DYVPESKFYKVEAILRPWRIPQVSSGLLKMGIRGVTVSDVKGFGAQGGSKERQGGSEFSE 122

Query: 123 DNFVAKVKMEIVVRNDQVEAVIDKIIEEARTGEIGDGKIFL 163
           DNFVAKVKMEIVVR DQVEAVI+KI+E ARTGEIGDGKIF 
Sbjct: 123 DNFVAKVKMEIVVRKDQVEAVINKIMETARTGEIGDGKIFC 163