Miyakogusa Predicted Gene

Lj1g3v4807560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4807560.1 tr|G4TKH3|G4TKH3_PIRID Related to G-patch-domain
Zn-finger DNA-binding protein-Laccaria bicolor
OS=P,37.06,6e-18,ZINC_FINGER_C2H2_1,Zinc finger, C2H2; G-patch,G-patch
domain; zf-C2H2_jaz,Zinc finger,
double-strand,NODE_61527_length_1387_cov_30.786591.path2.1
         (304 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g111520.1 | D111/G-patch domain protein | HC | chr7:457672...   397   e-111
Medtr8g070990.2 | RNA-binding protein, putative | HC | chr8:3009...    56   6e-08
Medtr8g070990.1 | RNA-binding protein, putative | HC | chr8:3009...    56   6e-08
Medtr8g070990.3 | RNA-binding protein, putative | HC | chr8:3009...    56   6e-08
Medtr1g115255.2 | DExH-box splicing factor-binding site protein ...    55   1e-07
Medtr1g115255.1 | DExH-box splicing factor-binding site protein ...    55   1e-07
Medtr1g115255.3 | DExH-box splicing factor-binding site protein ...    55   1e-07
Medtr7g070290.1 | tuftelin-interacting protein | HC | chr7:25945...    54   2e-07
Medtr8g010350.2 | tuftelin-interacting protein | HC | chr8:26603...    53   3e-07
Medtr8g010350.3 | tuftelin-interacting protein | HC | chr8:26603...    53   3e-07
Medtr8g010350.1 | tuftelin-interacting protein | HC | chr8:26603...    53   3e-07
Medtr8g070990.7 | RNA-binding protein, putative | HC | chr8:3009...    52   6e-07
Medtr8g070990.11 | RNA-binding protein, putative | HC | chr8:300...    52   6e-07
Medtr8g070990.5 | RNA-binding protein, putative | HC | chr8:3009...    52   6e-07
Medtr8g070990.8 | RNA-binding protein, putative | HC | chr8:3009...    52   6e-07
Medtr7g070300.1 | tuftelin interacting protein amine-terminal pr...    51   1e-06

>Medtr7g111520.1 | D111/G-patch domain protein | HC |
           chr7:45767228-45771675 | 20130731
          Length = 438

 Score =  397 bits (1021), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/287 (74%), Positives = 237/287 (82%), Gaps = 9/287 (3%)

Query: 20  FKKEEAHQDSLIGDLAEDFRLPINHRPTENVDLENVEQASLDTQLTSSNIGFKLLQKMGW 79
           FKK++A+ D       +DFRLP N RPTENVDL+NVEQASLDT +TSSNIGFKLLQKMGW
Sbjct: 159 FKKDQAYDD-------DDFRLPRNQRPTENVDLDNVEQASLDTHITSSNIGFKLLQKMGW 211

Query: 80  KGKGLGKDEQGIIEPIKSGMRDPRLGLGKQEEDDFFTAEENIQRKKLDVELEETEENVRK 139
           KGKGLGK+EQGI+EPIKSG+RDPRLG+GKQEEDDFFTAEEN+QRKKLD+ELEETEENVRK
Sbjct: 212 KGKGLGKNEQGIVEPIKSGIRDPRLGVGKQEEDDFFTAEENVQRKKLDIELEETEENVRK 271

Query: 140 REVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHG 199
           REVLAEREQKIQTEVKEIRKVF+C+LCNKQYKLAMEFEAHLSSYDHNHRKRFK+MKEMHG
Sbjct: 272 REVLAEREQKIQTEVKEIRKVFFCELCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKEMHG 331

Query: 200 GSSRDDXXXXXXXXXXXXIAKFAQIADAQKQQRLQLLQE--SGSEPVSSETRTATPLTDQ 257
            SSRDD            +AKFAQIADAQKQQRLQL QE  S +  VSSE++TAT LTDQ
Sbjct: 332 SSSRDDRQKREQQRQERELAKFAQIADAQKQQRLQLQQESGSAAVSVSSESKTATALTDQ 391

Query: 258 EQRNALXXXXXXXXXXXXNVIGPKRQMVAKKQNIPVSSIFNNDSDEE 304
           EQRN L            +  G K+Q V KKQN+PV+SIF NDSDEE
Sbjct: 392 EQRNTLKFGFSAKGTASKSTFGVKKQNVPKKQNLPVASIFGNDSDEE 438


>Medtr8g070990.2 | RNA-binding protein, putative | HC |
            chr8:30090202-30098355 | 20130731
          Length = 1062

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 14/84 (16%)

Query: 49   NVDLENVEQASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
            +V+L+  E  + D  +   N+G ++L+ MGW+ G GLGKD  G+IEP+++   + R GLG
Sbjct: 970  DVNLDTFEVITADKAIDEKNVGNRMLRNMGWQEGLGLGKDGSGMIEPVQTQAMENRAGLG 1029

Query: 108  KQEEDDFFTAEENIQRKKLDVELE 131
             Q+             KKLD  LE
Sbjct: 1030 SQQ-------------KKLDPSLE 1040


>Medtr8g070990.1 | RNA-binding protein, putative | HC |
            chr8:30090202-30098364 | 20130731
          Length = 1063

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 14/84 (16%)

Query: 49   NVDLENVEQASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
            +V+L+  E  + D  +   N+G ++L+ MGW+ G GLGKD  G+IEP+++   + R GLG
Sbjct: 971  DVNLDTFEVITADKAIDEKNVGNRMLRNMGWQEGLGLGKDGSGMIEPVQTQAMENRAGLG 1030

Query: 108  KQEEDDFFTAEENIQRKKLDVELE 131
             Q+             KKLD  LE
Sbjct: 1031 SQQ-------------KKLDPSLE 1041


>Medtr8g070990.3 | RNA-binding protein, putative | HC |
            chr8:30090202-30098383 | 20130731
          Length = 1063

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 14/84 (16%)

Query: 49   NVDLENVEQASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
            +V+L+  E  + D  +   N+G ++L+ MGW+ G GLGKD  G+IEP+++   + R GLG
Sbjct: 971  DVNLDTFEVITADKAIDEKNVGNRMLRNMGWQEGLGLGKDGSGMIEPVQTQAMENRAGLG 1030

Query: 108  KQEEDDFFTAEENIQRKKLDVELE 131
             Q+             KKLD  LE
Sbjct: 1031 SQQ-------------KKLDPSLE 1041


>Medtr1g115255.2 | DExH-box splicing factor-binding site protein |
           HC | chr1:51947201-51951240 | 20130731
          Length = 134

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)

Query: 58  ASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
            S  T + SSNIGF+LL+K GWK G GLG  EQG +EP+++ +++ + GLG
Sbjct: 18  GSATTTINSSNIGFQLLKKHGWKEGTGLGISEQGRLEPVETRVKNNKRGLG 68


>Medtr1g115255.1 | DExH-box splicing factor-binding site protein |
           HC | chr1:51947080-51951240 | 20130731
          Length = 122

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)

Query: 58  ASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
            S  T + SSNIGF+LL+K GWK G GLG  EQG +EP+++ +++ + GLG
Sbjct: 6   GSATTTINSSNIGFQLLKKHGWKEGTGLGISEQGRLEPVETRVKNNKRGLG 56


>Medtr1g115255.3 | DExH-box splicing factor-binding site protein |
           HC | chr1:51947092-51951240 | 20130731
          Length = 127

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)

Query: 58  ASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
            S  T + SSNIGF+LL+K GWK G GLG  EQG +EP+++ +++ + GLG
Sbjct: 6   GSATTTINSSNIGFQLLKKHGWKEGTGLGISEQGRLEPVETRVKNNKRGLG 56


>Medtr7g070290.1 | tuftelin-interacting protein | HC |
           chr7:25945232-25947085 | 20130731
          Length = 617

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 33/41 (80%)

Query: 67  SNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPRLGLG 107
           + +G KL++KMG+KG GLGK+EQGI+ PI++ +RD   GLG
Sbjct: 73  NGMGMKLMEKMGYKGGGLGKNEQGILNPIEAKLRDKYSGLG 113


>Medtr8g010350.2 | tuftelin-interacting protein | HC |
           chr8:2660340-2663583 | 20130731
          Length = 866

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 33/45 (73%)

Query: 66  SSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPRLGLGKQE 110
           +  IG KLL+KMG+KG GLGK+EQGI+ PI++ +R    GLG  E
Sbjct: 204 TKGIGMKLLEKMGYKGGGLGKNEQGILNPIEAKLRAKNSGLGFNE 248


>Medtr8g010350.3 | tuftelin-interacting protein | HC |
           chr8:2660344-2665761 | 20130731
          Length = 866

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 33/45 (73%)

Query: 66  SSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPRLGLGKQE 110
           +  IG KLL+KMG+KG GLGK+EQGI+ PI++ +R    GLG  E
Sbjct: 204 TKGIGMKLLEKMGYKGGGLGKNEQGILNPIEAKLRAKNSGLGFNE 248


>Medtr8g010350.1 | tuftelin-interacting protein | HC |
           chr8:2660340-2663583 | 20130731
          Length = 866

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 33/45 (73%)

Query: 66  SSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPRLGLGKQE 110
           +  IG KLL+KMG+KG GLGK+EQGI+ PI++ +R    GLG  E
Sbjct: 204 TKGIGMKLLEKMGYKGGGLGKNEQGILNPIEAKLRAKNSGLGFNE 248


>Medtr8g070990.7 | RNA-binding protein, putative | HC |
           chr8:30090202-30098364 | 20130731
          Length = 956

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 14/84 (16%)

Query: 49  NVDLENVEQASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
           +V+L+  E  + D  +   N+G ++L+ MGW+ G GLGKD  G+IEP+++   + R GLG
Sbjct: 864 DVNLDTFEVITADKAIDEKNVGNRMLRNMGWQEGLGLGKDGSGMIEPVQTQAMENRAGLG 923

Query: 108 KQEEDDFFTAEENIQRKKLDVELE 131
            Q+             KKLD  LE
Sbjct: 924 SQQ-------------KKLDPSLE 934


>Medtr8g070990.11 | RNA-binding protein, putative | HC |
           chr8:30090202-30098383 | 20130731
          Length = 956

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 14/84 (16%)

Query: 49  NVDLENVEQASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
           +V+L+  E  + D  +   N+G ++L+ MGW+ G GLGKD  G+IEP+++   + R GLG
Sbjct: 864 DVNLDTFEVITADKAIDEKNVGNRMLRNMGWQEGLGLGKDGSGMIEPVQTQAMENRAGLG 923

Query: 108 KQEEDDFFTAEENIQRKKLDVELE 131
            Q+             KKLD  LE
Sbjct: 924 SQQ-------------KKLDPSLE 934


>Medtr8g070990.5 | RNA-binding protein, putative | HC |
           chr8:30090202-30098364 | 20130731
          Length = 956

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 14/84 (16%)

Query: 49  NVDLENVEQASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
           +V+L+  E  + D  +   N+G ++L+ MGW+ G GLGKD  G+IEP+++   + R GLG
Sbjct: 864 DVNLDTFEVITADKAIDEKNVGNRMLRNMGWQEGLGLGKDGSGMIEPVQTQAMENRAGLG 923

Query: 108 KQEEDDFFTAEENIQRKKLDVELE 131
            Q+             KKLD  LE
Sbjct: 924 SQQ-------------KKLDPSLE 934


>Medtr8g070990.8 | RNA-binding protein, putative | HC |
           chr8:30090202-30098355 | 20130731
          Length = 955

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 14/84 (16%)

Query: 49  NVDLENVEQASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
           +V+L+  E  + D  +   N+G ++L+ MGW+ G GLGKD  G+IEP+++   + R GLG
Sbjct: 863 DVNLDTFEVITADKAIDEKNVGNRMLRNMGWQEGLGLGKDGSGMIEPVQTQAMENRAGLG 922

Query: 108 KQEEDDFFTAEENIQRKKLDVELE 131
            Q+             KKLD  LE
Sbjct: 923 SQQ-------------KKLDPSLE 933


>Medtr7g070300.1 | tuftelin interacting protein amine-terminal
           protein | LC | chr7:25951345-25952322 | 20130731
          Length = 325

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 31/39 (79%)

Query: 69  IGFKLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPRLGLG 107
           +G KL++KMG+KG GLGK+EQGI+ PI++  R  + GLG
Sbjct: 236 MGMKLMEKMGYKGGGLGKNEQGILNPIEAKPRTKQSGLG 274