Miyakogusa Predicted Gene

Lj1g3v4794010.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4794010.2 Non Characterized Hit- tr|I1N6P3|I1N6P3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47847 PE,57.65,6e-16,
,CUFF.33277.2
         (87 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R...    78   2e-15
Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor ...    76   9e-15

>Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr6:6917300-6911610 | 20130731
          Length = 634

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 3/82 (3%)

Query: 1   MLEAKEKIPKR-KISDATRIEPHFVDGR-KVFWKFKCFEGEDTLLLQDIKVQEGDGTAAT 58
           +LEAK  IPKR +  DA RIEP ++D     FWK K + GE   LLQD+K+ + D     
Sbjct: 544 LLEAKGTIPKRNQCCDAVRIEPEYLDNSGNAFWKLKSYNGEYAFLLQDVKIHDED-VVEV 602

Query: 59  DERWFFYGPEKKNDIDKYIASR 80
           DE+WF YG E+K+++ KYI+SR
Sbjct: 603 DEKWFVYGAEQKDEVTKYISSR 624


>Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor R1
           | LC | scaffold0024:150614-158393 | 20130731
          Length = 735

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 3/82 (3%)

Query: 1   MLEAKEKIPKR-KISDATRIEPHFVDGR-KVFWKFKCFEGEDTLLLQDIKVQEGDGTAAT 58
           ++EAK  IPKR +  D  RIEP ++D   K FWK +    E   +LQD+K+ + DG    
Sbjct: 644 LIEAKGTIPKRNRHCDTVRIEPEYLDSNGKTFWKLRSCNDEYAFMLQDLKIHDEDGVE-V 702

Query: 59  DERWFFYGPEKKNDIDKYIASR 80
           DE+WF YG E+K++++KYI+SR
Sbjct: 703 DEKWFVYGAEQKDEVNKYISSR 724