Miyakogusa Predicted Gene

Lj1g3v4765090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4765090.1 Non Characterized Hit- tr|I1KWJ8|I1KWJ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,62.35,2e-19,Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin,CUFF.33317.1
         (87 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g016950.1 | pollen protein Ole E I-like protein | HC | chr...    95   1e-20
Medtr6g015995.1 | pollen Ole e I family allergens | HC | chr6:56...    84   2e-17

>Medtr7g016950.1 | pollen protein Ole E I-like protein | HC |
           chr7:5358846-5361469 | 20130731
          Length = 465

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 2/85 (2%)

Query: 4   AQYLCKGASIAVECKEGN--SKLKFKKEVKTDKHGDFKVHLVFQVSKHVRRIKGCTLKFL 61
             +   GAS+ VECK+GN  SK +FKK+VKT++HG+FK+ L F VSKHV+RIKGC +K +
Sbjct: 53  GNHFISGASVEVECKDGNEISKPRFKKQVKTNEHGEFKIQLPFSVSKHVKRIKGCVVKLV 112

Query: 62  SSSEAHCVVSSTATSFSLSLKSRRQ 86
           SS+E  C ++S A+S SL LKSR+Q
Sbjct: 113 SSNEPFCSIASAASSSSLHLKSRKQ 137


>Medtr6g015995.1 | pollen Ole e I family allergens | HC |
           chr6:5684113-5686084 | 20130731
          Length = 346

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 50/66 (75%)

Query: 6   YLCKGASIAVECKEGNSKLKFKKEVKTDKHGDFKVHLVFQVSKHVRRIKGCTLKFLSSSE 65
           +   GASIAVECK G +K +F KEVKT++HG+FKV L F V KHV+RIKGC  K LSS+E
Sbjct: 53  HFISGASIAVECKIGKTKPRFYKEVKTNEHGEFKVKLPFLVKKHVKRIKGCNFKLLSSNE 112

Query: 66  AHCVVS 71
            +C ++
Sbjct: 113 PNCAIA 118