Miyakogusa Predicted Gene

Lj1g3v4764370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4764370.1 Non Characterized Hit- tr|K4C3R4|K4C3R4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,39.47,0.041,
,CUFF.33194.1
         (128 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g113860.1 | hypothetical protein | HC | chr3:53107320-5310...   120   3e-28
Medtr7g107650.1 | hypothetical protein | HC | chr7:43920463-4391...   108   2e-24

>Medtr3g113860.1 | hypothetical protein | HC |
           chr3:53107320-53105720 | 20130731
          Length = 308

 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/113 (60%), Positives = 81/113 (71%), Gaps = 5/113 (4%)

Query: 19  VEDAKEGGQFQETELFEDTLVINSPFTEV--ENLSVN-TEVIDDSDSDTVECRTTGPVSE 75
           V DA     +QETELFEDTLVIN PFTE+  ENL +N TE+++DS+   VE   TG V E
Sbjct: 11  VNDANSDENYQETELFEDTLVINGPFTEIGLENLDLNNTEIVEDSEP--VEDMITGTVCE 68

Query: 76  HEQEVVLDSEDEEMNSAGAMTVAKGFLEDETGPKVRNLSMLFKKRRLQPPCEQ 128
           +E EVV DSEDEEMN+ G +TV K FLEDE+ P V N S+LFKKR  + PCEQ
Sbjct: 69  YETEVVFDSEDEEMNNTGKVTVGKRFLEDESSPTVYNSSVLFKKRLPKLPCEQ 121


>Medtr7g107650.1 | hypothetical protein | HC |
           chr7:43920463-43915680 | 20130731
          Length = 949

 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/125 (52%), Positives = 84/125 (67%), Gaps = 6/125 (4%)

Query: 7   SQPSSPPPAGGMVEDAKEGGQFQETELFEDTLVINSPFTE--VENLSVN-TEVIDDSDSD 63
           +QPSS P +G  V D      + ETELFEDTLVI+  FTE  +E L +N TE+++DS+  
Sbjct: 4   TQPSSAP-SGDEVNDTNGNENYHETELFEDTLVIDDKFTETGLEILDLNNTEIVEDSE-- 60

Query: 64  TVECRTTGPVSEHEQEVVLDSEDEEMNSAGAMTVAKGFLEDETGPKVRNLSMLFKKRRLQ 123
            VE   TG   E+E EVVLDSEDEEMN+ G +TV + FL+ ++ P V N S+LFKKR  +
Sbjct: 61  PVEDMITGTACEYETEVVLDSEDEEMNNTGKLTVGERFLQAKSSPAVNNSSVLFKKRLPK 120

Query: 124 PPCEQ 128
            PCEQ
Sbjct: 121 LPCEQ 125