Miyakogusa Predicted Gene

Lj1g3v4764230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4764230.1 gi|3695062|gb|AF064789.1|.path1.1
         (411 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g107560.1 | Rac GTPase activating protein | HC | chr7:4387...   471   e-133
Medtr1g089500.1 | Rac GTPase activating protein | HC | chr1:3999...   467   e-131
Medtr8g026680.1 | Rac GTPase activating protein | HC | chr8:9249...   340   2e-93
Medtr7g104900.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   331   1e-90
Medtr4g052850.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   325   4e-89
Medtr2g086580.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   320   2e-87
Medtr7g081615.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   249   5e-66
Medtr5g064420.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   187   1e-47

>Medtr7g107560.1 | Rac GTPase activating protein | HC |
           chr7:43875012-43878185 | 20130731
          Length = 435

 Score =  471 bits (1211), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/413 (63%), Positives = 292/413 (70%), Gaps = 20/413 (4%)

Query: 1   MVACSVDSPDDVISAVH-PMEIGWPTNVKHVTHVTFDRFNGFLGLPLELEVHXXXXXXXX 59
           MVACSV+SPDDVISAVH PMEIGWPTNVKHV HVTFDRFNGFLGLPLELEVH        
Sbjct: 41  MVACSVESPDDVISAVHHPMEIGWPTNVKHVNHVTFDRFNGFLGLPLELEVHVPAPVPSA 100

Query: 60  XXXXXXXXXXXMQCSYDSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRD 119
                      MQCSYDSKGNSVPTILLLMQERLYSQGGL AEGIFRINPENG+EEHLR+
Sbjct: 101 SVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENGEEEHLRE 160

Query: 120 QLNRGVVPDNIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTE 179
           QLN G+VP++IDVHCLAGLIKAWFRELPSGVLDGLSPE+VLECNTEEE V+LVKQLKP E
Sbjct: 161 QLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEESVELVKQLKPVE 220

Query: 180 LALLNWALDLMADVVEEEEHNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI 239
            ALLNWA+DLMADVV EEE NKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI
Sbjct: 221 SALLNWAVDLMADVVVEEECNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI 280

Query: 240 LKTLSEREEATTAGYXXXXXXXXXXXXEDEYDSQLEMYTSAELRGSQSDCDDHVXXXXXX 299
           LKTL +REE  TA Y             DEYDSQ EMYTS EL+ ++ D DDHV      
Sbjct: 281 LKTLRDREETATAEYSSMSSHSS-----DEYDSQQEMYTSGELKRTKLDYDDHV---DYS 332

Query: 300 XXXXXXXXXXXXXXXCFLKQLNENKQGGFA-EEPARSTCSGYNLESAVSFTDAKPDNSCS 358
                          CFL+QL++ +   F  E+PA       +L+  +       D+  S
Sbjct: 333 HNIEEAASALSEIEECFLEQLDDVQTKRFTKEKPAE------HLQEELESPTKTEDSCLS 386

Query: 359 SSYEDDXXXXXXXXXXXXXXXXXXXXXTYCTNDVEMMDKFADCVSLVPLFASS 411
           SSY +                      +  TNDVEM+DKF+D +SL+PLFAS+
Sbjct: 387 SSYRNG----STTTEGSNADTSSPSIESKNTNDVEMVDKFSDSISLLPLFASN 435


>Medtr1g089500.1 | Rac GTPase activating protein | HC |
           chr1:39993064-39989777 | 20130731
          Length = 483

 Score =  467 bits (1201), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/447 (56%), Positives = 287/447 (64%), Gaps = 47/447 (10%)

Query: 1   MVACSVDSPD-DVISAVHPMEIGWPTNVKHVTHVTFDRFNGFLGLPLELEVHXXXXXXXX 59
           MVAC VD PD +VIS VH MEIGWPT+V+H+THVTFDRFNGFLGLP+E EV         
Sbjct: 48  MVACRVDRPDHEVISTVHQMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVEIPGRVPSA 107

Query: 60  XXXXXXXXXXXMQCSYDSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRD 119
                      MQCSYDSKGNSVPTIL+LMQ+RLYSQGGL AEGIFRINPEN +EEH+R+
Sbjct: 108 SVSVFGVSAESMQCSYDSKGNSVPTILMLMQDRLYSQGGLKAEGIFRINPENSKEEHVRN 167

Query: 120 QLNRGVVPDNIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTE 179
           QLN G+VPD+IDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEE ++LVKQLKPTE
Sbjct: 168 QLNSGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESIELVKQLKPTE 227

Query: 180 LALLNWALDLMADVVEEEEHNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI 239
            ALL+WA+DLMADVV+EEE NKM+ARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI
Sbjct: 228 SALLSWAIDLMADVVQEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI 287

Query: 240 LKTLSEREEATTAGYXXXXXXXXXXXXEDEYDSQLEMYT--------------------- 278
           +KTL EREE  T GY            EDEYDSQ E  T                     
Sbjct: 288 MKTLREREETATGGYSPMSFRTSFRRSEDEYDSQRETATGGYSPMSFRSSYRPSEDEYDS 347

Query: 279 ------SAELRGSQSDCDDHVXXXXXXXXXXXXXXXXXXXXXCFLKQLNENKQGGFAEEP 332
                 S+ELR ++SD DDH                      CFLK+L+E+ +  F+EEP
Sbjct: 348 QREIDASSELRRTKSDFDDHA-HYRNSSQEELEAESLSEIEDCFLKKLDEHTK-EFSEEP 405

Query: 333 --------ARSTCSGYNLESAVSFTDAKPDNSCSSSYEDDXXXXXXXXXXXXXXXXXXXX 384
                   +   C  Y++E AV  TD++   SC S   +                     
Sbjct: 406 ESYLQEYVSSKNCCDYSVEPAVPITDSEIVKSCLSFDREKFNADTTIPLRLGWTD----- 460

Query: 385 XTYCTNDVEMMDKFADCVSLVPLFASS 411
               T DVEM+DKF D VS VP   SS
Sbjct: 461 ----TEDVEMIDKFTDSVSPVPRLTSS 483


>Medtr8g026680.1 | Rac GTPase activating protein | HC |
           chr8:9249397-9245785 | 20130731
          Length = 492

 Score =  340 bits (872), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 162/249 (65%), Positives = 191/249 (76%), Gaps = 5/249 (2%)

Query: 1   MVACSVDSPDDVISAVHPMEIGWPTNVKHVTHVTFDRFNGFLGLPLELEVHXXXXXXXXX 60
           +V CSV+  D     V  ++I WPT V+HV+HVTFDRFNGFLGLP E +           
Sbjct: 96  IVTCSVERED-----VSSLDISWPTEVRHVSHVTFDRFNGFLGLPSEFQPEVPTRVPSAS 150

Query: 61  XXXXXXXXXXMQCSYDSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQ 120
                     MQCSYD +GNSVPTILL MQ++LYS+GGL AEGIFRI  EN QE  +RDQ
Sbjct: 151 VKVFGVSAKSMQCSYDDRGNSVPTILLRMQKQLYSEGGLKAEGIFRITAENSQEAFVRDQ 210

Query: 121 LNRGVVPDNIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTEL 180
           LN+GVVP  IDVHCL+GLIKAWFRELP+GVLD L+PEQV++CNTE++   LVK L  TE 
Sbjct: 211 LNKGVVPHGIDVHCLSGLIKAWFRELPTGVLDSLTPEQVMQCNTEDDCTNLVKLLPSTEA 270

Query: 181 ALLNWALDLMADVVEEEEHNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIL 240
           ALL+WA++LMADVVE E+ NKM+ARN+AMVFAPNMTQM+DPLTAL+HAVQVMN LKTLIL
Sbjct: 271 ALLDWAINLMADVVENEQFNKMNARNVAMVFAPNMTQMADPLTALIHAVQVMNFLKTLIL 330

Query: 241 KTLSEREEA 249
           K L EREE+
Sbjct: 331 KMLREREES 339


>Medtr7g104900.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr7:42531591-42525668 |
           20130731
          Length = 477

 Score =  331 bits (848), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 158/233 (67%), Positives = 182/233 (78%)

Query: 19  MEIGWPTNVKHVTHVTFDRFNGFLGLPLELEVHXXXXXXXXXXXXXXXXXXXMQCSYDSK 78
           MEIGWP+NV+HV HVTFDRF+GFLGLP+E E                     MQ S+D++
Sbjct: 97  MEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPTRPPSASTSVFGVSTESMQLSFDAR 156

Query: 79  GNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQLNRGVVPDNIDVHCLAGL 138
           GNSVPTILLLMQ  LY+QGGL AEGIFRIN EN QEE +R+QLNRGVVP+ IDVHCLAGL
Sbjct: 157 GNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEFVREQLNRGVVPNGIDVHCLAGL 216

Query: 139 IKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTELALLNWALDLMADVVEEEE 198
           IKAWFRELP+G+LD LSPEQV++  TEEE  QLV+ L  TE ALL+WA++LMADV + E 
Sbjct: 217 IKAWFRELPTGILDPLSPEQVMQSQTEEECAQLVRLLPATESALLDWAVNLMADVAQMEH 276

Query: 199 HNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLSEREEATT 251
            NKM+ARNIAMVFAPNMT M DPLTALM+AVQVMN LKTL+  TL EREE+ T
Sbjct: 277 LNKMNARNIAMVFAPNMTHMVDPLTALMYAVQVMNFLKTLVAMTLKEREESIT 329


>Medtr4g052850.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr4:19175348-19178049 |
           20130731
          Length = 363

 Score =  325 bits (834), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 158/249 (63%), Positives = 188/249 (75%), Gaps = 8/249 (3%)

Query: 1   MVACSVDSPDDVISAVHPMEIGWPTNVKHVTHVTFDRFNGFLGLPLELEVHXXXXXXXXX 60
           +V+C+ D+          MEIG PTNV+H+ HVTFDRFNGFLGLPLEL            
Sbjct: 82  LVSCASDAS--------AMEIGHPTNVRHLAHVTFDRFNGFLGLPLELVPQVPTTPPSAS 133

Query: 61  XXXXXXXXXXMQCSYDSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQ 120
                     M+ SYD +GN VPTILLL+QE LY+QGGL AEGIFRIN +N QEE+LRDQ
Sbjct: 134 ATVFGVSTESMKLSYDRRGNIVPTILLLIQEHLYAQGGLQAEGIFRINADNRQEEYLRDQ 193

Query: 121 LNRGVVPDNIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTEL 180
           LN+GVVP++IDVHCLAGLIKAWFRELP GVLD LSPEQV+ C TEE+  +L+ QL  TE 
Sbjct: 194 LNKGVVPEDIDVHCLAGLIKAWFRELPRGVLDSLSPEQVMTCQTEEDCAELMSQLPHTEA 253

Query: 181 ALLNWALDLMADVVEEEEHNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIL 240
           +LLNW ++LMADVV+EE  NKM+ARNIAMVFAPNMT+M+DPLTA M+AVQVMN LKTL+ 
Sbjct: 254 SLLNWTINLMADVVQEEHLNKMNARNIAMVFAPNMTRMADPLTAFMYAVQVMNFLKTLVS 313

Query: 241 KTLSEREEA 249
            TL ER ++
Sbjct: 314 MTLKERNDS 322


>Medtr2g086580.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr2:36405412-36408662 |
           20130731
          Length = 451

 Score =  320 bits (819), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 155/231 (67%), Positives = 180/231 (77%)

Query: 19  MEIGWPTNVKHVTHVTFDRFNGFLGLPLELEVHXXXXXXXXXXXXXXXXXXXMQCSYDSK 78
           M+I  PTNV+HV HVTFDRFNGFLGLP E E                     MQ SYDS+
Sbjct: 73  MDISPPTNVRHVAHVTFDRFNGFLGLPDEFEPDFPRRPPSASATVFGVSTESMQLSYDSR 132

Query: 79  GNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQLNRGVVPDNIDVHCLAGL 138
           GNSVPTILLLMQ  LY Q GL  EGIFRIN +N QEEH+R+QLN G+VP++IDVHCLAGL
Sbjct: 133 GNSVPTILLLMQRHLYVQEGLQVEGIFRINADNSQEEHVRNQLNMGLVPEDIDVHCLAGL 192

Query: 139 IKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTELALLNWALDLMADVVEEEE 198
           IKAWFRELPSGVLD LS EQV++C TEE+ ++LV+ L   E ALL+WA++LMADVVE E 
Sbjct: 193 IKAWFRELPSGVLDSLSQEQVMQCQTEEDCIELVRHLPHAEAALLDWAINLMADVVEHEN 252

Query: 199 HNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLSEREEA 249
            NKM+ARNIAMVFAPNMTQM+DP TALM+AVQVMN LKTLIL+TL ER+++
Sbjct: 253 LNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLKTLILRTLRERKDS 303


>Medtr7g081615.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr7:31295617-31296762 |
           20130731
          Length = 182

 Score =  249 bits (635), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 121/147 (82%), Positives = 132/147 (89%), Gaps = 2/147 (1%)

Query: 71  MQCSYDSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQLNRGVVPDNI 130
           MQCSYDSKGNSVP ILLLMQERLYSQG    +GIF IN ENG+EEHLR+Q N G+VP +I
Sbjct: 27  MQCSYDSKGNSVPAILLLMQERLYSQG--RTKGIFCINLENGEEEHLREQFNSGIVPIDI 84

Query: 131 DVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTELALLNWALDLM 190
           DVHCLAGLIKAWFRELPSGVLDGLSPE+VLECNTEEEFV+LVK LKP E ALLNWA+DLM
Sbjct: 85  DVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEEFVELVKLLKPVESALLNWAVDLM 144

Query: 191 ADVVEEEEHNKMDARNIAMVFAPNMTQ 217
           ADVV EEE+NK++A NIAMVFAPNMTQ
Sbjct: 145 ADVVVEEEYNKLNAINIAMVFAPNMTQ 171


>Medtr5g064420.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr5:27034836-27036920 |
           20130731
          Length = 238

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/141 (65%), Positives = 111/141 (78%), Gaps = 4/141 (2%)

Query: 71  MQCSYDSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQLNRGVVPDNI 130
           M+ SYD +GN VPTILLLMQE LY+QGGL AEGIFRIN +N QEE+ RD+LN+GVVP++I
Sbjct: 59  MKLSYDRRGNIVPTILLLMQEHLYAQGGLQAEGIFRINADNRQEEYHRDELNKGVVPEDI 118

Query: 131 DVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTELALLNWALDLM 190
           DVHCL GLIK   +    GVLD LSPEQV++C TEE+  +L   L  TE +LLNW ++LM
Sbjct: 119 DVHCLTGLIKGATK----GVLDSLSPEQVMQCQTEEDCAELASHLPHTEASLLNWTINLM 174

Query: 191 ADVVEEEEHNKMDARNIAMVF 211
           ADVV+EE  NKM+A NIAMVF
Sbjct: 175 ADVVQEEHLNKMNACNIAMVF 195