Miyakogusa Predicted Gene

Lj1g3v4763860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4763860.1 tr|G7I359|G7I359_MEDTR Calcium homeostasis
endoplasmic reticulum protein OS=Medicago truncatula
GN=M,81.05,0,Suppressor-of-White-APricot splicing regulat,SWAP/Surp;
no description,RNA polymerase II, large subu,CUFF.33187.1
         (689 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g092770.1 | suppressor-of-white-APricot splicing regulator...   695   0.0  

>Medtr1g092770.1 | suppressor-of-white-APricot splicing regulator,
           putative | HC | chr1:41769142-41763148 | 20130731
          Length = 679

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/598 (63%), Positives = 405/598 (67%), Gaps = 21/598 (3%)

Query: 98  FPSHYPRPLVXXXXXXXXXXXXXXXXXXELHKRIDKLVEYAVKNGPEFEAMICEKQRDNP 157
           FPSHYP  L                   EL KRIDKLVEYAVKNGPEFEAMICEKQRDNP
Sbjct: 97  FPSHYPPHLAPSPFFDSAPPPVAPPSDPELQKRIDKLVEYAVKNGPEFEAMICEKQRDNP 156

Query: 158 AYGFLFGEEGHGYYRFKLWLSSHPPGGPFNPAFQXXXXXXXXXXXXXXXXXXXLNAPPMN 217
           +Y FLFG EG+ YYRFKLWLSS PP GPFN  F                     + PPMN
Sbjct: 157 SYSFLFGGEGNAYYRFKLWLSSRPPSGPFNQPFPSSSVSMIHPSPNPMMSPSP-SGPPMN 215

Query: 218 ----AAASSMLGXXXXXXXXXXXXXXXXXXSFGLHGRPEYDQSSKSFKGLSGPLPSDVAM 273
                ++ SML                   SFGLHGRPEYDQSSKSFKGLSGPLPSDVAM
Sbjct: 216 PIGIGSSPSMLVPPPFQQFYDQQHHHQHHQSFGLHGRPEYDQSSKSFKGLSGPLPSDVAM 275

Query: 274 ELSNVLGNLTGTKESIKSAKLWFMQRSPFAPALAEALRERVFALDDVERQLHIIYLANDI 333
           ELSNVL NL GTKESIK AKLWFMQR+PFAPALAE LR+RVFA DDVERQLHIIYLANDI
Sbjct: 276 ELSNVLNNLNGTKESIKGAKLWFMQRAPFAPALAETLRDRVFAFDDVERQLHIIYLANDI 335

Query: 334 LFDSLNRRASTHDLDNEALAFKPVLGSMLARIYHNPQSNEEYRKRLQQMVEFWSSKEVYE 393
           LFDSLNRRASTHDLDNEALAFKPVLGSMLARIYHNPQSNEEYRKRLQQMVEFW+SKEV++
Sbjct: 336 LFDSLNRRASTHDLDNEALAFKPVLGSMLARIYHNPQSNEEYRKRLQQMVEFWASKEVFD 395

Query: 394 QETISLMKGEMIGGPQS-TFPXXXXXXXXXXXXXXXXXXQTPNHIGQQWLADRGGAGLSV 452
           QETIS +K EM  GPQ+ +FP                  QTPNHI QQW ADR  +G  V
Sbjct: 396 QETISSLKVEMFSGPQTNSFPATQKDLSSASADSGAGILQTPNHIVQQWQADRMSSGTIV 455

Query: 453 LDQDRPDKHAILGQSMPASLAAQQFHLNSAPPSAFPGSMAIPSTAQPTNQPPGAHLLPPP 512
           LDQDRPDK  +LGQ    S+AAQQF  NSAPPSAFPGSM IPS+ QPTNQ        PP
Sbjct: 456 LDQDRPDK--LLGQ----SIAAQQFLTNSAPPSAFPGSMGIPSSVQPTNQ--------PP 501

Query: 513 SSNTSEQXXXXXXXXXXXXXGMVRKMQIGSGVPYSPLSPLXXXXXXXXXXXXXXXXLQRV 572
           SS T EQ             GMVRKMQIGSGVPYSP+SPL                LQRV
Sbjct: 502 SSGTGEQLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTMIPPSTVPPSEILQRV 561

Query: 573 SKFFKEIGEVNPSEGPMNXXXXXXXXXXXXXXXXXTPARKGGACIPPPANL-QVDPETGT 631
           SKFFKEIGEVNPSEGPMN                 +  RKGGACIPPP +L Q+DPETGT
Sbjct: 562 SKFFKEIGEVNPSEGPMNSESRDEDDEYDGEYERESQVRKGGACIPPPPHLQQIDPETGT 621

Query: 632 YADGSVDRKPXXXXXXXXXXXATANPNEVSQYDDVYTSYRKQRSTNYHSSMSARAITR 689
           YADGSVDRKP           ATA+PNEVSQYDDVY+SYRKQRSTNYH+SMSARA  +
Sbjct: 622 YADGSVDRKPGSSGSGRLGLGATADPNEVSQYDDVYSSYRKQRSTNYHTSMSARATVK 679