Miyakogusa Predicted Gene
- Lj1g3v4753360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4753360.1 tr|G7IP72|G7IP72_MEDTR Exosome complex
exonuclease RRP45 OS=Medicago truncatula GN=MTR_2g019210
PE=4,81.96,0,Ribosomal protein S5 domain 2-like,Ribosomal protein S5
domain 2-type fold; Ribonuclease PH domain 2,CUFF.33142.1
(448 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g019210.1 | exosome complex exonuclease RRP41 | HC | chr2:... 706 0.0
Medtr2g019210.2 | exosome complex exonuclease RRP41 | HC | chr2:... 607 e-174
Medtr2g019210.3 | exosome complex exonuclease RRP41 | HC | chr2:... 607 e-174
Medtr1g063090.1 | exosome complex exonuclease RRP41 | HC | chr1:... 488 e-138
Medtr8g077430.1 | exosome complex exonuclease RRP41 | HC | chr8:... 98 2e-20
Medtr8g077430.2 | exosome complex exonuclease RRP41 | HC | chr8:... 98 2e-20
Medtr8g077430.3 | exosome complex exonuclease RRP41 | HC | chr8:... 98 2e-20
Medtr1g031820.1 | exosome complex exonuclease RRP41 | HC | chr1:... 95 1e-19
Medtr1g007060.1 | exosome complex exonuclease RRP46 | HC | chr1:... 80 3e-15
Medtr1g007060.2 | exosome complex exonuclease RRP46 | HC | chr1:... 79 6e-15
>Medtr2g019210.1 | exosome complex exonuclease RRP41 | HC |
chr2:6209449-6213016 | 20130731
Length = 449
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/449 (77%), Positives = 387/449 (86%), Gaps = 1/449 (0%)
Query: 1 MEQRLANSWRMTVNEKKFIETALLSELRVDGRGPLEYRRLTIKFGKDDGSAMVQLGETRV 60
MEQRLAN WR+TVNEKKFIE+ALLSELRVDGRGPL+YR+L IKFG+DDGSA +QLGETRV
Sbjct: 1 MEQRLANCWRLTVNEKKFIESALLSELRVDGRGPLDYRKLNIKFGRDDGSAEIQLGETRV 60
Query: 61 MSFVTAQLVQPYRDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
MSFV+AQLVQPY+DRPNEG+LSIFTEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61 MSFVSAQLVQPYKDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120
Query: 121 VDTESLCVLSGQLVWAVRIDIHIXXXXXXXXXXXXXXXXXXXXTFRRPECSLGGEDGQKV 180
+DTESLC+LS +LVWA+RIDIHI TFRRPECSLGGEDGQ+V
Sbjct: 121 IDTESLCILSAKLVWAIRIDIHILDNAGNLVDAANIAALASLKTFRRPECSLGGEDGQQV 180
Query: 181 VVHPPEVRDPLPLIIHHLPIAVTFGFFSDEYLVIMDPTYQEESVMTGRMTATVNANGDVC 240
VVHPPEVR+PLPLIIHHLP+AVTFGFFS+E LV++DPTY EE+VMTGRMTAT+NANGDVC
Sbjct: 181 VVHPPEVREPLPLIIHHLPVAVTFGFFSNENLVVLDPTYHEEAVMTGRMTATLNANGDVC 240
Query: 241 AIQKAGGQGVLQKLIMHCLRLAHVKAGDITTKIKEAVEKHNTERALRKIKRH-SSVSVDV 299
AIQK GGQGV Q++IMHCL+LAHVKAGDIT+KI +AVEKHN ERAL+KIKRH SSV+VDV
Sbjct: 241 AIQKPGGQGVFQRVIMHCLKLAHVKAGDITSKINDAVEKHNNERALQKIKRHSSSVAVDV 300
Query: 300 CGTTARLGEKQNPLDGDKDGSCLDQLKLKDEGNFMECEATPSGHVQSSQGDGVSKNFTGG 359
CG TA LG KQN GDK+GS LDQ KLK E NFMEC+AT SG VQSS+ DG SKNFTGG
Sbjct: 301 CGATATLGGKQNQSHGDKEGSHLDQSKLKGETNFMECDATSSGQVQSSKKDGSSKNFTGG 360
Query: 360 PSSWDPYSECVNSDLLKASLASRGPSGNVKQKDSGSAPKPEEAPQEIKKDSSPIDTALAA 419
PSSWDPYSECVNSDLLKASLASRG KQKDS KPEE QEIK S+P+DTAL A
Sbjct: 361 PSSWDPYSECVNSDLLKASLASRGQLTPSKQKDSRHETKPEEPVQEIKTVSAPLDTALTA 420
Query: 420 EQNNEGKTLKDAVKPKNRRKKRAPTNSGN 448
Q+NEGKTLKDAVKPKN+RKK+ TN+GN
Sbjct: 421 GQSNEGKTLKDAVKPKNKRKKKTSTNNGN 449
>Medtr2g019210.2 | exosome complex exonuclease RRP41 | HC |
chr2:6209367-6213281 | 20130731
Length = 364
Score = 607 bits (1565), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/364 (78%), Positives = 319/364 (87%), Gaps = 1/364 (0%)
Query: 1 MEQRLANSWRMTVNEKKFIETALLSELRVDGRGPLEYRRLTIKFGKDDGSAMVQLGETRV 60
MEQRLAN WR+TVNEKKFIE+ALLSELRVDGRGPL+YR+L IKFG+DDGSA +QLGETRV
Sbjct: 1 MEQRLANCWRLTVNEKKFIESALLSELRVDGRGPLDYRKLNIKFGRDDGSAEIQLGETRV 60
Query: 61 MSFVTAQLVQPYRDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
MSFV+AQLVQPY+DRPNEG+LSIFTEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61 MSFVSAQLVQPYKDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120
Query: 121 VDTESLCVLSGQLVWAVRIDIHIXXXXXXXXXXXXXXXXXXXXTFRRPECSLGGEDGQKV 180
+DTESLC+LS +LVWA+RIDIHI TFRRPECSLGGEDGQ+V
Sbjct: 121 IDTESLCILSAKLVWAIRIDIHILDNAGNLVDAANIAALASLKTFRRPECSLGGEDGQQV 180
Query: 181 VVHPPEVRDPLPLIIHHLPIAVTFGFFSDEYLVIMDPTYQEESVMTGRMTATVNANGDVC 240
VVHPPEVR+PLPLIIHHLP+AVTFGFFS+E LV++DPTY EE+VMTGRMTAT+NANGDVC
Sbjct: 181 VVHPPEVREPLPLIIHHLPVAVTFGFFSNENLVVLDPTYHEEAVMTGRMTATLNANGDVC 240
Query: 241 AIQKAGGQGVLQKLIMHCLRLAHVKAGDITTKIKEAVEKHNTERALRKIKRH-SSVSVDV 299
AIQK GGQGV Q++IMHCL+LAHVKAGDIT+KI +AVEKHN ERAL+KIKRH SSV+VDV
Sbjct: 241 AIQKPGGQGVFQRVIMHCLKLAHVKAGDITSKINDAVEKHNNERALQKIKRHSSSVAVDV 300
Query: 300 CGTTARLGEKQNPLDGDKDGSCLDQLKLKDEGNFMECEATPSGHVQSSQGDGVSKNFTGG 359
CG TA LG KQN GDK+GS LDQ KLK E NFMEC+AT SG VQSS+ DG SKNFTGG
Sbjct: 301 CGATATLGGKQNQSHGDKEGSHLDQSKLKGETNFMECDATSSGQVQSSKKDGSSKNFTGG 360
Query: 360 PSSW 363
PSSW
Sbjct: 361 PSSW 364
>Medtr2g019210.3 | exosome complex exonuclease RRP41 | HC |
chr2:6209367-6212019 | 20130731
Length = 364
Score = 607 bits (1565), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/364 (78%), Positives = 319/364 (87%), Gaps = 1/364 (0%)
Query: 1 MEQRLANSWRMTVNEKKFIETALLSELRVDGRGPLEYRRLTIKFGKDDGSAMVQLGETRV 60
MEQRLAN WR+TVNEKKFIE+ALLSELRVDGRGPL+YR+L IKFG+DDGSA +QLGETRV
Sbjct: 1 MEQRLANCWRLTVNEKKFIESALLSELRVDGRGPLDYRKLNIKFGRDDGSAEIQLGETRV 60
Query: 61 MSFVTAQLVQPYRDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
MSFV+AQLVQPY+DRPNEG+LSIFTEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61 MSFVSAQLVQPYKDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120
Query: 121 VDTESLCVLSGQLVWAVRIDIHIXXXXXXXXXXXXXXXXXXXXTFRRPECSLGGEDGQKV 180
+DTESLC+LS +LVWA+RIDIHI TFRRPECSLGGEDGQ+V
Sbjct: 121 IDTESLCILSAKLVWAIRIDIHILDNAGNLVDAANIAALASLKTFRRPECSLGGEDGQQV 180
Query: 181 VVHPPEVRDPLPLIIHHLPIAVTFGFFSDEYLVIMDPTYQEESVMTGRMTATVNANGDVC 240
VVHPPEVR+PLPLIIHHLP+AVTFGFFS+E LV++DPTY EE+VMTGRMTAT+NANGDVC
Sbjct: 181 VVHPPEVREPLPLIIHHLPVAVTFGFFSNENLVVLDPTYHEEAVMTGRMTATLNANGDVC 240
Query: 241 AIQKAGGQGVLQKLIMHCLRLAHVKAGDITTKIKEAVEKHNTERALRKIKRH-SSVSVDV 299
AIQK GGQGV Q++IMHCL+LAHVKAGDIT+KI +AVEKHN ERAL+KIKRH SSV+VDV
Sbjct: 241 AIQKPGGQGVFQRVIMHCLKLAHVKAGDITSKINDAVEKHNNERALQKIKRHSSSVAVDV 300
Query: 300 CGTTARLGEKQNPLDGDKDGSCLDQLKLKDEGNFMECEATPSGHVQSSQGDGVSKNFTGG 359
CG TA LG KQN GDK+GS LDQ KLK E NFMEC+AT SG VQSS+ DG SKNFTGG
Sbjct: 301 CGATATLGGKQNQSHGDKEGSHLDQSKLKGETNFMECDATSSGQVQSSKKDGSSKNFTGG 360
Query: 360 PSSW 363
PSSW
Sbjct: 361 PSSW 364
>Medtr1g063090.1 | exosome complex exonuclease RRP41 | HC |
chr1:27736500-27739997 | 20130731
Length = 298
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 226/298 (75%), Positives = 258/298 (86%)
Query: 1 MEQRLANSWRMTVNEKKFIETALLSELRVDGRGPLEYRRLTIKFGKDDGSAMVQLGETRV 60
MEQR AN WR+TVNEKKFIE++LLSELRVDGRG LEYR+L+IKFGKD+GSA VQLGETRV
Sbjct: 1 MEQRYANCWRLTVNEKKFIESSLLSELRVDGRGSLEYRKLSIKFGKDNGSAEVQLGETRV 60
Query: 61 MSFVTAQLVQPYRDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
MSFV+A+LVQPY+DRPNEG+LSIFTEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61 MSFVSAELVQPYKDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120
Query: 121 VDTESLCVLSGQLVWAVRIDIHIXXXXXXXXXXXXXXXXXXXXTFRRPECSLGGEDGQKV 180
+DTESLCVLS +LVWA+RIDIHI TFRR ECSLGGEDGQ+V
Sbjct: 121 IDTESLCVLSAKLVWAIRIDIHILDNAGNLVDAANIAALASLSTFRRSECSLGGEDGQQV 180
Query: 181 VVHPPEVRDPLPLIIHHLPIAVTFGFFSDEYLVIMDPTYQEESVMTGRMTATVNANGDVC 240
VVHPPEVR+PLPLIIHHLP+AVTFGFFS+E LV++DPTY EE+VMTG MT T+NANGDVC
Sbjct: 181 VVHPPEVREPLPLIIHHLPVAVTFGFFSNENLVVLDPTYHEEAVMTGSMTVTLNANGDVC 240
Query: 241 AIQKAGGQGVLQKLIMHCLRLAHVKAGDITTKIKEAVEKHNTERALRKIKRHSSVSVD 298
AIQK G QG+ Q++IMHCL+LAHVKA DITTKI +AVEKHN +R ++K+KRHS+ D
Sbjct: 241 AIQKPGRQGIFQRVIMHCLKLAHVKAADITTKIIDAVEKHNIQREVQKVKRHSNCFTD 298
>Medtr8g077430.1 | exosome complex exonuclease RRP41 | HC |
chr8:32861534-32866106 | 20130731
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 18/267 (6%)
Query: 11 MTVNEKKFIETALLSELRVDGRGPLEYRRLTIKFG---KDDGSAMVQLGETRVMSFVTAQ 67
+++ E+ FIE + +LR DGR L YR + ++ G + +GSA V++G T V++ V A+
Sbjct: 4 LSLGEQCFIEGGIAHDLRCDGRKRLTYRPILVETGVIPQANGSARVRIGATEVIASVKAE 63
Query: 68 LVQPYRDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESR-----AVD 122
L +P +P++G +SI+ + S A+P+FE + +L + R L ++ A+D
Sbjct: 64 LGKPSLMQPDKGKVSIYIDCSSTAEPAFEGRGADWLSADLSNALQRCLLGAKSGAGAAID 123
Query: 123 TESLCVLSGQLVWAVRIDIHIXXXXXXXXXXXXXXXXXXXXTFRRPECSLGGEDGQKVVV 182
SL V+ G++ W + ID + P+ +
Sbjct: 124 RSSLVVVEGKICWDLYIDGLVVSSDGNLLDTLGAAIKVALSNTGIPKVQIAAGASSD--- 180
Query: 183 HPPEV----RDPLPLIIHHLPIAVTFGFFSDEYLVIMDPTYQEESVMTGRMTATVNANGD 238
PEV D + +P+ VT Y+V D T +EES M+ ++ ++N G
Sbjct: 181 EQPEVDVSDEDFMQFDTSGIPVIVTLTKVGKHYIV--DATPEEESQMSSAVSISINRQGH 238
Query: 239 VCAIQKAGGQGVLQKLIMHCLRLA-HV 264
+C + K GG G+ +I+ + +A HV
Sbjct: 239 ICGVTKRGGAGLDPSVILDMVSVAKHV 265
>Medtr8g077430.2 | exosome complex exonuclease RRP41 | HC |
chr8:32861534-32866106 | 20130731
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 18/267 (6%)
Query: 11 MTVNEKKFIETALLSELRVDGRGPLEYRRLTIKFG---KDDGSAMVQLGETRVMSFVTAQ 67
+++ E+ FIE + +LR DGR L YR + ++ G + +GSA V++G T V++ V A+
Sbjct: 4 LSLGEQCFIEGGIAHDLRCDGRKRLTYRPILVETGVIPQANGSARVRIGATEVIASVKAE 63
Query: 68 LVQPYRDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESR-----AVD 122
L +P +P++G +SI+ + S A+P+FE + +L + R L ++ A+D
Sbjct: 64 LGKPSLMQPDKGKVSIYIDCSSTAEPAFEGRGADWLSADLSNALQRCLLGAKSGAGAAID 123
Query: 123 TESLCVLSGQLVWAVRIDIHIXXXXXXXXXXXXXXXXXXXXTFRRPECSLGGEDGQKVVV 182
SL V+ G++ W + ID + P+ +
Sbjct: 124 RSSLVVVEGKICWDLYIDGLVVSSDGNLLDTLGAAIKVALSNTGIPKVQIAAGASSD--- 180
Query: 183 HPPEV----RDPLPLIIHHLPIAVTFGFFSDEYLVIMDPTYQEESVMTGRMTATVNANGD 238
PEV D + +P+ VT Y+V D T +EES M+ ++ ++N G
Sbjct: 181 EQPEVDVSDEDFMQFDTSGIPVIVTLTKVGKHYIV--DATPEEESQMSSAVSISINRQGH 238
Query: 239 VCAIQKAGGQGVLQKLIMHCLRLA-HV 264
+C + K GG G+ +I+ + +A HV
Sbjct: 239 ICGVTKRGGAGLDPSVILDMVSVAKHV 265
>Medtr8g077430.3 | exosome complex exonuclease RRP41 | HC |
chr8:32861534-32866106 | 20130731
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 18/267 (6%)
Query: 11 MTVNEKKFIETALLSELRVDGRGPLEYRRLTIKFG---KDDGSAMVQLGETRVMSFVTAQ 67
+++ E+ FIE + +LR DGR L YR + ++ G + +GSA V++G T V++ V A+
Sbjct: 4 LSLGEQCFIEGGIAHDLRCDGRKRLTYRPILVETGVIPQANGSARVRIGATEVIASVKAE 63
Query: 68 LVQPYRDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESR-----AVD 122
L +P +P++G +SI+ + S A+P+FE + +L + R L ++ A+D
Sbjct: 64 LGKPSLMQPDKGKVSIYIDCSSTAEPAFEGRGADWLSADLSNALQRCLLGAKSGAGAAID 123
Query: 123 TESLCVLSGQLVWAVRIDIHIXXXXXXXXXXXXXXXXXXXXTFRRPECSLGGEDGQKVVV 182
SL V+ G++ W + ID + P+ +
Sbjct: 124 RSSLVVVEGKICWDLYIDGLVVSSDGNLLDTLGAAIKVALSNTGIPKVQIAAGASSD--- 180
Query: 183 HPPEV----RDPLPLIIHHLPIAVTFGFFSDEYLVIMDPTYQEESVMTGRMTATVNANGD 238
PEV D + +P+ VT Y+V D T +EES M+ ++ ++N G
Sbjct: 181 EQPEVDVSDEDFMQFDTSGIPVIVTLTKVGKHYIV--DATPEEESQMSSAVSISINRQGH 238
Query: 239 VCAIQKAGGQGVLQKLIMHCLRLA-HV 264
+C + K GG G+ +I+ + +A HV
Sbjct: 239 ICGVTKRGGAGLDPSVILDMVSVAKHV 265
>Medtr1g031820.1 | exosome complex exonuclease RRP41 | HC |
chr1:11167445-11172254 | 20130731
Length = 683
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 20/268 (7%)
Query: 11 MTVNEKKFIETALLSELRVDGRGPLEYRRLTIKFG---KDDGSAMVQLGETRVMSFVTAQ 67
+++ E+ FI+ + +LR DGR L YR + ++ G + +GSA V++G T V++ V A+
Sbjct: 401 LSLGEQHFIQGGIAQDLRCDGRKRLTYRPIHVETGVIPQANGSARVKIGATEVIASVKAE 460
Query: 68 LVQPYRDRPNEGSLSIFTEFSPMADPSFEPGRPGES-AVELGRVIDRGLRESRA-----V 121
L +P +P++G + I+ + S A+P+FE GR GE + EL + R L +++ +
Sbjct: 461 LGKPSSMQPDKGKVFIYIDCSSTAEPAFE-GRGGEELSAELSTALQRCLLGAKSGAGAGI 519
Query: 122 DTESLCVLSGQLVWAVRIDIHIXXXXXXXXXXXXXXXXXXXXTFRRPECSLGGEDGQKVV 181
D SL V+ G++ W + ID + P + +
Sbjct: 520 DRTSLVVVEGKICWDLYIDGLVVSSDGNLLDALGSAIKAALSNTGIPSVKVTADASSD-- 577
Query: 182 VHPPEV----RDPLPLIIHHLPIAVTFGFFSDEYLVIMDPTYQEESVMTGRMTATVNANG 237
PEV + L +P+ +T Y+V D T +EES M+ ++ ++N G
Sbjct: 578 -EQPEVDVSDEEFLQFDTSGVPVIITLTKIGRHYIV--DATPEEESQMSSAVSISINRKG 634
Query: 238 DVCAIQKAGGQGVLQKLIMHCLRLA-HV 264
+C I K GG G+ +I+ + +A HV
Sbjct: 635 HICGITKRGGAGLDPSVILDMVSVAKHV 662
>Medtr1g007060.1 | exosome complex exonuclease RRP46 | HC |
chr1:171864-178799 | 20130731
Length = 304
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 15/243 (6%)
Query: 17 KFIETALLSELRVDGRGPLEYRRLTIKFG---KDDGSAMVQLGETRVMSFVTAQLVQPYR 73
++ E L +R DGR E R +I G +GSA+V++G T +++ + +++ P
Sbjct: 28 RYFERHLAESIRSDGRPLREARDTSIFLGAVASANGSALVKIGSTTMLTAIKMEVMIPSL 87
Query: 74 DRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDTESLCVLSGQL 133
+ P+EG L+I P+ P PGRP E+ + + + + S +D L ++ G+
Sbjct: 88 ESPDEGCLAIDFHMPPICSPIVRPGRPAEAEPVVSKQLSDTITSSGMIDLRELSLVGGKA 147
Query: 134 VWAVRIDIHIXXXXXXXXXXXXXXXXXXXXTFRRPECS---------LGGEDGQKVVVHP 184
W +DI+ + P + + EDGQK
Sbjct: 148 AWMAYLDIYCLDADGSLFDAALLSAVAALSHLQIPAVAMNDDGKIVLMSDEDGQKQAKEQ 207
Query: 185 PEVRDPLPLIIHHLPIAVTFGFFSDEYLVIMDPTYQEESVMTGRMTATVNANGDVCAIQK 244
++ L + +P+++T + ++ DPT +EES++ +T ++ +G + ++ K
Sbjct: 208 VN-KEKRKLTLKSIPLSLTCILHKN--YILADPTAEEESIVETHVTIILDTSGQLISLYK 264
Query: 245 AGG 247
GG
Sbjct: 265 PGG 267
>Medtr1g007060.2 | exosome complex exonuclease RRP46 | HC |
chr1:171864-178056 | 20130731
Length = 284
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 15/243 (6%)
Query: 17 KFIETALLSELRVDGRGPLEYRRLTIKFG---KDDGSAMVQLGETRVMSFVTAQLVQPYR 73
++ E L +R DGR E R +I G +GSA+V++G T +++ + +++ P
Sbjct: 28 RYFERHLAESIRSDGRPLREARDTSIFLGAVASANGSALVKIGSTTMLTAIKMEVMIPSL 87
Query: 74 DRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDTESLCVLSGQL 133
+ P+EG L+I P+ P PGRP E+ + + + + S +D L ++ G+
Sbjct: 88 ESPDEGCLAIDFHMPPICSPIVRPGRPAEAEPVVSKQLSDTITSSGMIDLRELSLVGGKA 147
Query: 134 VWAVRIDIHIXXXXXXXXXXXXXXXXXXXXTFRRPECS---------LGGEDGQKVVVHP 184
W +DI+ + P + + EDGQK
Sbjct: 148 AWMAYLDIYCLDADGSLFDAALLSAVAALSHLQIPAVAMNDDGKIVLMSDEDGQKQAKEQ 207
Query: 185 PEVRDPLPLIIHHLPIAVTFGFFSDEYLVIMDPTYQEESVMTGRMTATVNANGDVCAIQK 244
++ L + +P+++T + ++ DPT +EES++ +T ++ +G + ++ K
Sbjct: 208 VN-KEKRKLTLKSIPLSLTCILHKN--YILADPTAEEESIVETHVTIILDTSGQLISLYK 264
Query: 245 AGG 247
GG
Sbjct: 265 PGG 267